RNA–Protein interactions for RNA: ENST00000502980.1

CLDND1-207, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-207ENST00000502980 SH2D4AQ9H788 454 aa20.57■□□□□ 0.88
CLDND1-207ENST00000502980 PPP4R2Q9NY27 417 aa20.57■□□□□ 0.88
CLDND1-207ENST00000502980 ORC4O43929 436 aa20.56■□□□□ 0.88
CLDND1-207ENST00000502980 GNRH1P01148 92 aa20.56■□□□□ 0.88
CLDND1-207ENST00000502980 FGAP02671 866 aa20.56■□□□□ 0.88
CLDND1-207ENST00000502980 ARHGEF6Q15052 776 aa20.56■□□□□ 0.88
CLDND1-207ENST00000502980 C17orf99Q6UX52 265 aa20.56■□□□□ 0.88
CLDND1-207ENST00000502980 GTF3C2Q8WUA4 911 aaPredicted RBP20.56■□□□□ 0.88
CLDND1-207ENST00000502980 ZNF296Q8WUU4 475 aaPredicted RBP20.56■□□□□ 0.88
CLDND1-207ENST00000502980 LPAR1Q92633 364 aa20.56■□□□□ 0.88
CLDND1-207ENST00000502980 TMOD4Q9NZQ9 345 aa20.56■□□□□ 0.88
CLDND1-207ENST00000502980 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.56■□□□□ 0.88
CLDND1-207ENST00000502980 TMX2Q9Y320 296 aa20.56■□□□□ 0.88
CLDND1-207ENST00000502980 CYP2D7A0A087X1C5 515 aa20.55■□□□□ 0.88
CLDND1-207ENST00000502980 IGKV6D-41A0A0C4DH26 115 aa20.55■□□□□ 0.88
CLDND1-207ENST00000502980 CHMLP26374 656 aa20.55■□□□□ 0.88
CLDND1-207ENST00000502980 EVX2Q03828 476 aa20.55■□□□□ 0.88
CLDND1-207ENST00000502980 COL13A1Q5TAT6 717 aaPredicted RBP20.55■□□□□ 0.88
CLDND1-207ENST00000502980 CCDC129Q6ZRS4 1044 aa20.55■□□□□ 0.88
CLDND1-207ENST00000502980 SLC44A5Q8NCS7 719 aa20.55■□□□□ 0.88
CLDND1-207ENST00000502980 NYAP2Q9P242 653 aa20.55■□□□□ 0.88
CLDND1-207ENST00000502980 MINDY4BA8MYZ0 360 aa20.54■□□□□ 0.88
CLDND1-207ENST00000502980 GCLCP48506 637 aaPredicted RBP20.54■□□□□ 0.88
CLDND1-207ENST00000502980 NOVP48745 357 aa20.54■□□□□ 0.88
CLDND1-207ENST00000502980 HMGCS2P54868 508 aa20.54■□□□□ 0.88
CLDND1-207ENST00000502980 SP3Q02447 781 aa20.54■□□□□ 0.88
CLDND1-207ENST00000502980 MTMR2Q13614 643 aa20.54■□□□□ 0.88
CLDND1-207ENST00000502980 SEPT2Q15019 361 aa20.54■□□□□ 0.88
CLDND1-207ENST00000502980 SLC4A8Q2Y0W8 1093 aa20.54■□□□□ 0.88
CLDND1-207ENST00000502980 VPS53Q5VIR6 699 aa20.54■□□□□ 0.88
CLDND1-207ENST00000502980 CWC27Q6UX04 472 aaKnown RBP20.54■□□□□ 0.88
CLDND1-207ENST00000502980 LBX2Q6XYB7 198 aa20.54■□□□□ 0.88
CLDND1-207ENST00000502980 SIAH1Q8IUQ4 282 aa20.54■□□□□ 0.88
CLDND1-207ENST00000502980 MKL1Q969V6 931 aa20.54■□□□□ 0.88
CLDND1-207ENST00000502980 ERO1AQ96HE7 468 aa20.54■□□□□ 0.88
CLDND1-207ENST00000502980 R3HDMLQ9H3Y0 253 aa20.54■□□□□ 0.88
CLDND1-207ENST00000502980 MKNK2Q9HBH9 465 aa20.54■□□□□ 0.88
CLDND1-207ENST00000502980 EMILIN3Q9NT22 766 aa20.54■□□□□ 0.88
CLDND1-207ENST00000502980 CTNNA3Q9UI47 895 aa20.54■□□□□ 0.88
CLDND1-207ENST00000502980 CASP8AP2Q9UKL3 1982 aa20.54■□□□□ 0.88
CLDND1-207ENST00000502980 BCRP11274 1271 aa20.53■□□□□ 0.88
CLDND1-207ENST00000502980 AKR1B1P15121 316 aa20.53■□□□□ 0.88
CLDND1-207ENST00000502980 RAB3GAP1Q15042 981 aa20.53■□□□□ 0.88
CLDND1-207ENST00000502980 ZNF444Q8N0Y2 327 aaPredicted RBP20.53■□□□□ 0.88
CLDND1-207ENST00000502980 NEDD1Q8NHV4 660 aa20.53■□□□□ 0.88
CLDND1-207ENST00000502980 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.53■□□□□ 0.88
CLDND1-207ENST00000502980 ARHGEF10LQ9HCE6 1279 aa20.53■□□□□ 0.88
CLDND1-207ENST00000502980 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.53■□□□□ 0.88
CLDND1-207ENST00000502980 OSBPP22059 807 aa20.52■□□□□ 0.88
CLDND1-207ENST00000502980 SHROOM1Q2M3G4 852 aaPredicted RBP20.52■□□□□ 0.88
CLDND1-207ENST00000502980 CTU1Q7Z7A3 348 aaKnown RBP20.52■□□□□ 0.88
CLDND1-207ENST00000502980 SMIM22K7EJ46 135 aa20.51■□□□□ 0.87
CLDND1-207ENST00000502980 SGSM2O43147 1006 aa20.51■□□□□ 0.87
CLDND1-207ENST00000502980 ICA1Q05084 483 aa20.51■□□□□ 0.87
CLDND1-207ENST00000502980 GADL1Q6ZQY3 521 aa20.51■□□□□ 0.87
CLDND1-207ENST00000502980 CCDC84Q86UT8 332 aaPredicted RBP20.51■□□□□ 0.87
CLDND1-207ENST00000502980 STAG1Q8WVM7 1258 aa20.51■□□□□ 0.87
CLDND1-207ENST00000502980 RNF41Q9H4P4 317 aaPredicted RBP20.51■□□□□ 0.87
CLDND1-207ENST00000502980 TCP11L1Q9NUJ3 509 aa20.51■□□□□ 0.87
CLDND1-207ENST00000502980 MYPNQ86TC9 1320 aa20.51■□□□□ 0.87
CLDND1-207ENST00000502980 A0A1W2PRG0 241 aa20.5■□□□□ 0.87
CLDND1-207ENST00000502980 PRMT2P55345 433 aa20.5■□□□□ 0.87
CLDND1-207ENST00000502980 FAM110CQ1W6H9 321 aa20.5■□□□□ 0.87
CLDND1-207ENST00000502980 TREML2Q5T2D2 321 aa20.5■□□□□ 0.87
CLDND1-207ENST00000502980 MORF4L1Q9UBU8 362 aa20.5■□□□□ 0.87
CLDND1-207ENST00000502980 LAMA4Q16363 1823 aa20.5■□□□□ 0.87
CLDND1-207ENST00000502980 USP17L15C9J2P7 530 aa20.49■□□□□ 0.87
CLDND1-207ENST00000502980 USP17L13C9JLJ4 530 aa20.49■□□□□ 0.87
CLDND1-207ENST00000502980 USP17L11C9JVI0 530 aa20.49■□□□□ 0.87
CLDND1-207ENST00000502980 USP17L18D6R9N7 530 aa20.49■□□□□ 0.87
CLDND1-207ENST00000502980 USP17L22D6RA61 530 aa20.49■□□□□ 0.87
CLDND1-207ENST00000502980 USP17L17D6RBQ6 530 aa20.49■□□□□ 0.87
CLDND1-207ENST00000502980 USP17L19D6RCP7 530 aa20.49■□□□□ 0.87
CLDND1-207ENST00000502980 USP17L20D6RJB6 530 aa20.49■□□□□ 0.87
CLDND1-207ENST00000502980 MPHOSPH10O00566 681 aaKnown RBP20.49■□□□□ 0.87
CLDND1-207ENST00000502980 USP17L24Q0WX57 530 aa20.49■□□□□ 0.87
CLDND1-207ENST00000502980 CATSPERGQ6ZRH7 1159 aa20.49■□□□□ 0.87
CLDND1-207ENST00000502980 ACER1Q8TDN7 264 aa20.49■□□□□ 0.87
CLDND1-207ENST00000502980 FEZ1Q99689 392 aa20.49■□□□□ 0.87
CLDND1-207ENST00000502980 ASCC2Q9H1I8 757 aaPredicted RBP20.49■□□□□ 0.87
CLDND1-207ENST00000502980 VCPKMTQ9H867 229 aa20.49■□□□□ 0.87
CLDND1-207ENST00000502980 MTMR4Q9NYA4 1195 aa20.49■□□□□ 0.87
CLDND1-207ENST00000502980 VCAM1P19320 739 aa20.48■□□□□ 0.87
CLDND1-207ENST00000502980 LACTBP83111 547 aaPredicted RBP20.48■□□□□ 0.87
CLDND1-207ENST00000502980 AKNAD1Q5T1N1 836 aa20.48■□□□□ 0.87
CLDND1-207ENST00000502980 TNS4Q8IZW8 715 aa20.48■□□□□ 0.87
CLDND1-207ENST00000502980 ZNF213O14771 459 aa20.47■□□□□ 0.87
CLDND1-207ENST00000502980 WDR46O15213 610 aaKnown RBP20.47■□□□□ 0.87
CLDND1-207ENST00000502980 TTLL1O95922 423 aa20.47■□□□□ 0.87
CLDND1-207ENST00000502980 EEF2P13639 858 aaKnown RBP20.47■□□□□ 0.87
CLDND1-207ENST00000502980 TSPY3P0CV98 308 aa20.46■□□□□ 0.87
CLDND1-207ENST00000502980 TSPY8P0CW00 308 aa20.46■□□□□ 0.87
CLDND1-207ENST00000502980 CYP2C8P10632 490 aa20.46■□□□□ 0.87
CLDND1-207ENST00000502980 IRX3P78415 501 aaPredicted RBP20.46■□□□□ 0.87
CLDND1-207ENST00000502980 KIF22Q14807 665 aa20.46■□□□□ 0.87
CLDND1-207ENST00000502980 IMMTQ16891 758 aaKnown RBP20.46■□□□□ 0.87
CLDND1-207ENST00000502980 GMCL1P1Q8NEA9 526 aa20.46■□□□□ 0.87
CLDND1-207ENST00000502980 SMCR8Q8TEV9 937 aaPredicted RBP20.46■□□□□ 0.87
CLDND1-207ENST00000502980 MAP4K1Q92918 833 aa20.46■□□□□ 0.87
CLDND1-207ENST00000502980 TTC14Q96N46 770 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms