RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 TMED8Q6PL24 325 aaPredicted RBP13.37□□□□□ -0.27
LSAMP-206ENST00000498645 LCORLQ8N3X6 602 aa13.37□□□□□ -0.27
LSAMP-206ENST00000498645 ACER1Q8TDN7 264 aa13.37□□□□□ -0.27
LSAMP-206ENST00000498645 DIS3LQ8TF46 1054 aaKnown RBP13.37□□□□□ -0.27
LSAMP-206ENST00000498645 SDR42E1Q8WUS8 393 aa13.37□□□□□ -0.27
LSAMP-206ENST00000498645 NUDT12Q9BQG2 462 aa13.37□□□□□ -0.27
LSAMP-206ENST00000498645 PORCNQ9H237 461 aa13.37□□□□□ -0.27
LSAMP-206ENST00000498645 RBPJLQ9UBG7 517 aa13.37□□□□□ -0.27
LSAMP-206ENST00000498645 NR2E3Q9Y5X4 410 aa13.37□□□□□ -0.27
LSAMP-206ENST00000498645 EVI5O60447 810 aa13.36□□□□□ -0.27
LSAMP-206ENST00000498645 VCAM1P19320 739 aa13.36□□□□□ -0.27
LSAMP-206ENST00000498645 MAPK4P31152 587 aa13.36□□□□□ -0.27
LSAMP-206ENST00000498645 SHMT1P34896 483 aa13.36□□□□□ -0.27
LSAMP-206ENST00000498645 USP14P54578 494 aa13.36□□□□□ -0.27
LSAMP-206ENST00000498645 Q3C1V9 767 aa13.36□□□□□ -0.27
LSAMP-206ENST00000498645 SLFNL1Q499Z3 407 aa13.36□□□□□ -0.27
LSAMP-206ENST00000498645 GTF3C2Q8WUA4 911 aaPredicted RBP13.36□□□□□ -0.27
LSAMP-206ENST00000498645 SOCS4Q8WXH5 440 aa13.36□□□□□ -0.27
LSAMP-206ENST00000498645 PAWRQ96IZ0 340 aaKnown RBP13.36□□□□□ -0.27
LSAMP-206ENST00000498645 BOLA2Q9H3K6 86 aa13.36□□□□□ -0.27
LSAMP-206ENST00000498645 ARMT1Q9H993 441 aa13.36□□□□□ -0.27
LSAMP-206ENST00000498645 HMX1Q9NP08 348 aaPredicted RBP13.36□□□□□ -0.27
LSAMP-206ENST00000498645 PAG1Q9NWQ8 432 aa13.36□□□□□ -0.27
LSAMP-206ENST00000498645 RPTORQ8N122 1335 aa13.36□□□□□ -0.27
LSAMP-206ENST00000498645 RANBP2P49792 3224 aaKnown RBP13.35□□□□□ -0.27
LSAMP-206ENST00000498645 TCRBV5S4A2TA0A5A2 114 aa13.35□□□□□ -0.27
LSAMP-206ENST00000498645 USP17L15C9J2P7 530 aa13.35□□□□□ -0.27
LSAMP-206ENST00000498645 USP17L13C9JLJ4 530 aa13.35□□□□□ -0.27
LSAMP-206ENST00000498645 USP17L11C9JVI0 530 aa13.35□□□□□ -0.27
LSAMP-206ENST00000498645 USP17L18D6R9N7 530 aa13.35□□□□□ -0.27
LSAMP-206ENST00000498645 USP17L22D6RA61 530 aa13.35□□□□□ -0.27
LSAMP-206ENST00000498645 USP17L17D6RBQ6 530 aa13.35□□□□□ -0.27
LSAMP-206ENST00000498645 USP17L19D6RCP7 530 aa13.35□□□□□ -0.27
LSAMP-206ENST00000498645 USP17L20D6RJB6 530 aa13.35□□□□□ -0.27
LSAMP-206ENST00000498645 RAB11FIP3O75154 756 aa13.35□□□□□ -0.27
LSAMP-206ENST00000498645 CYP2D6P10635 497 aa13.35□□□□□ -0.27
LSAMP-206ENST00000498645 PRKAR2AP13861 404 aaKnown RBP13.35□□□□□ -0.27
LSAMP-206ENST00000498645 ZKSCAN1P17029 563 aaPredicted RBP13.35□□□□□ -0.27
LSAMP-206ENST00000498645 USP17L24Q0WX57 530 aa13.35□□□□□ -0.27
LSAMP-206ENST00000498645 SEPT2Q15019 361 aa13.35□□□□□ -0.27
LSAMP-206ENST00000498645 GPR142Q7Z601 462 aa13.35□□□□□ -0.27
LSAMP-206ENST00000498645 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.35□□□□□ -0.27
LSAMP-206ENST00000498645 KIAA1683Q9H0B3 1180 aa13.35□□□□□ -0.27
LSAMP-206ENST00000498645 CRISPLD2Q9H0B8 497 aa13.35□□□□□ -0.27
LSAMP-206ENST00000498645 CHMP4BQ9H444 224 aaKnown RBP13.35□□□□□ -0.27
LSAMP-206ENST00000498645 RBM27Q9P2N5 1060 aaKnown RBP13.35□□□□□ -0.27
LSAMP-206ENST00000498645 MBD4O95243 580 aa13.34□□□□□ -0.27
LSAMP-206ENST00000498645 GUCY1A2P33402 732 aa13.34□□□□□ -0.27
LSAMP-206ENST00000498645 RGS2P41220 211 aa13.34□□□□□ -0.27
LSAMP-206ENST00000498645 C20orf194Q5TEA3 1177 aa13.34□□□□□ -0.27
LSAMP-206ENST00000498645 POTEEQ6S8J3 1075 aa13.34□□□□□ -0.27
LSAMP-206ENST00000498645 NECAB2Q7Z6G3 386 aa13.34□□□□□ -0.27
LSAMP-206ENST00000498645 PLEKHH3Q7Z736 793 aa13.34□□□□□ -0.27
LSAMP-206ENST00000498645 SLC44A5Q8NCS7 719 aa13.34□□□□□ -0.27
LSAMP-206ENST00000498645 C12orf42Q96LP6 360 aa13.34□□□□□ -0.27
LSAMP-206ENST00000498645 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.34□□□□□ -0.27
LSAMP-206ENST00000498645 RPAP3Q9H6T3 665 aaPredicted RBP13.34□□□□□ -0.27
LSAMP-206ENST00000498645 DCP1AQ9NPI6 582 aaPredicted RBP13.34□□□□□ -0.27
LSAMP-206ENST00000498645 PRKAB2O43741 272 aa13.33□□□□□ -0.28
LSAMP-206ENST00000498645 SMARCA5O60264 1052 aaPredicted RBP13.33□□□□□ -0.28
LSAMP-206ENST00000498645 CCNA1P78396 465 aa13.33□□□□□ -0.28
LSAMP-206ENST00000498645 CCL14Q16627 93 aa13.33□□□□□ -0.28
LSAMP-206ENST00000498645 CATSPERGQ6ZRH7 1159 aa13.33□□□□□ -0.28
LSAMP-206ENST00000498645 DYNLL2Q96FJ2 89 aa13.33□□□□□ -0.28
LSAMP-206ENST00000498645 APBA2Q99767 749 aa13.33□□□□□ -0.28
LSAMP-206ENST00000498645 TANGO6Q9C0B7 1094 aa13.33□□□□□ -0.28
LSAMP-206ENST00000498645 RABGAP1Q9Y3P9 1069 aa13.33□□□□□ -0.28
LSAMP-206ENST00000498645 CNMDO75829 334 aa13.32□□□□□ -0.28
LSAMP-206ENST00000498645 GLRX3O76003 335 aaKnown RBP13.32□□□□□ -0.28
LSAMP-206ENST00000498645 CHGBP05060 677 aa13.32□□□□□ -0.28
LSAMP-206ENST00000498645 XRCC5P13010 732 aaKnown RBP13.32□□□□□ -0.28
LSAMP-206ENST00000498645 CAPN2P17655 700 aa13.32□□□□□ -0.28
LSAMP-206ENST00000498645 ATP5JP18859 108 aa13.32□□□□□ -0.28
LSAMP-206ENST00000498645 ADD2P35612 726 aa13.32□□□□□ -0.28
LSAMP-206ENST00000498645 GABPAQ06546 454 aa13.32□□□□□ -0.28
LSAMP-206ENST00000498645 CACNB2Q08289 660 aaPredicted RBP13.32□□□□□ -0.28
LSAMP-206ENST00000498645 MORN1Q5T089 497 aa13.32□□□□□ -0.28
LSAMP-206ENST00000498645 SAMD1Q6SPF0 538 aaPredicted RBP13.32□□□□□ -0.28
LSAMP-206ENST00000498645 CLEC10AQ8IUN9 316 aa13.32□□□□□ -0.28
LSAMP-206ENST00000498645 TRMT44Q8IYL2 757 aaKnown RBP13.32□□□□□ -0.28
LSAMP-206ENST00000498645 C7orf61Q8IZ16 206 aa13.32□□□□□ -0.28
LSAMP-206ENST00000498645 HAUS7Q99871 368 aa13.32□□□□□ -0.28
LSAMP-206ENST00000498645 LRRCC1Q9C099 1032 aa13.32□□□□□ -0.28
LSAMP-206ENST00000498645 FRMPD3Q5JV73 1810 aa13.32□□□□□ -0.28
LSAMP-206ENST00000498645 CYP2D7A0A087X1C5 515 aa13.31□□□□□ -0.28
LSAMP-206ENST00000498645 A0A1W2PRG0 241 aa13.31□□□□□ -0.28
LSAMP-206ENST00000498645 SPDYE16A6NNV3 312 aaPredicted RBP13.31□□□□□ -0.28
LSAMP-206ENST00000498645 CCND3P30281 292 aaPredicted RBP13.31□□□□□ -0.28
LSAMP-206ENST00000498645 MAP3K21Q5TCX8 1036 aa13.31□□□□□ -0.28
LSAMP-206ENST00000498645 AMOTL1Q8IY63 956 aa13.31□□□□□ -0.28
LSAMP-206ENST00000498645 ANKLE1Q8NAG6 615 aa13.31□□□□□ -0.28
LSAMP-206ENST00000498645 USP6NLQ92738 828 aa13.31□□□□□ -0.28
LSAMP-206ENST00000498645 DDRGK1Q96HY6 314 aa13.31□□□□□ -0.28
LSAMP-206ENST00000498645 NBPF3Q9H094 633 aa13.31□□□□□ -0.28
LSAMP-206ENST00000498645 C11orf49Q9H6J7 331 aa13.31□□□□□ -0.28
LSAMP-206ENST00000498645 BTBD7Q9P203 1132 aa13.31□□□□□ -0.28
LSAMP-206ENST00000498645 IVNS1ABPQ9Y6Y0 642 aa13.31□□□□□ -0.28
LSAMP-206ENST00000498645 AKR1B1P15121 316 aa13.3□□□□□ -0.28
LSAMP-206ENST00000498645 MAP2K5Q13163 448 aa13.3□□□□□ -0.28
LSAMP-206ENST00000498645 TMEM179Q6ZVK1 233 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms