RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 DDX20Q9UHI6 824 aaKnown RBP17.08■□□□□ 0.32
CCDC58-207ENST00000498466 PNMA6EA0A0J9YXQ4 647 aa17.07■□□□□ 0.32
CCDC58-207ENST00000498466 USP17L15C9J2P7 530 aa17.07■□□□□ 0.32
CCDC58-207ENST00000498466 USP17L13C9JLJ4 530 aa17.07■□□□□ 0.32
CCDC58-207ENST00000498466 USP17L11C9JVI0 530 aa17.07■□□□□ 0.32
CCDC58-207ENST00000498466 USP17L18D6R9N7 530 aa17.07■□□□□ 0.32
CCDC58-207ENST00000498466 USP17L22D6RA61 530 aa17.07■□□□□ 0.32
CCDC58-207ENST00000498466 USP17L17D6RBQ6 530 aa17.07■□□□□ 0.32
CCDC58-207ENST00000498466 USP17L19D6RCP7 530 aa17.07■□□□□ 0.32
CCDC58-207ENST00000498466 USP17L20D6RJB6 530 aa17.07■□□□□ 0.32
CCDC58-207ENST00000498466 CNMDO75829 334 aa17.07■□□□□ 0.32
CCDC58-207ENST00000498466 RARSP54136 660 aaKnown RBP17.07■□□□□ 0.32
CCDC58-207ENST00000498466 ATP2B2Q01814 1243 aa17.07■□□□□ 0.32
CCDC58-207ENST00000498466 USP17L24Q0WX57 530 aa17.07■□□□□ 0.32
CCDC58-207ENST00000498466 ARHGAP45Q92619 1136 aa17.07■□□□□ 0.32
CCDC58-207ENST00000498466 IVNS1ABPQ9Y6Y0 642 aa17.07■□□□□ 0.32
CCDC58-207ENST00000498466 SLC15A5A6NIM6 579 aa17.06■□□□□ 0.32
CCDC58-207ENST00000498466 MSCO60682 206 aa17.06■□□□□ 0.32
CCDC58-207ENST00000498466 CYP2E1P05181 493 aaPredicted RBP17.06■□□□□ 0.32
CCDC58-207ENST00000498466 PTPREP23469 700 aa17.06■□□□□ 0.32
CCDC58-207ENST00000498466 ZNF697Q5TEC3 545 aa17.06■□□□□ 0.32
CCDC58-207ENST00000498466 LPAR1Q92633 364 aa17.06■□□□□ 0.32
CCDC58-207ENST00000498466 C12orf42Q96LP6 360 aa17.06■□□□□ 0.32
CCDC58-207ENST00000498466 MAST2Q6P0Q8 1798 aa17.05■□□□□ 0.32
CCDC58-207ENST00000498466 DNM1LO00429 736 aa17.05■□□□□ 0.32
CCDC58-207ENST00000498466 USP14P54578 494 aa17.05■□□□□ 0.32
CCDC58-207ENST00000498466 DYNLL1P63167 89 aaKnown RBP17.05■□□□□ 0.32
CCDC58-207ENST00000498466 RAB3GAP1Q15042 981 aa17.05■□□□□ 0.32
CCDC58-207ENST00000498466 TNNI3KQ59H18 835 aa17.05■□□□□ 0.32
CCDC58-207ENST00000498466 CATSPERGQ6ZRH7 1159 aa17.05■□□□□ 0.32
CCDC58-207ENST00000498466 DBNDD2Q9BQY9 259 aa17.05■□□□□ 0.32
CCDC58-207ENST00000498466 FPGT-TNNI3KV9GXZ4 949 aa17.05■□□□□ 0.32
CCDC58-207ENST00000498466 CYP2C19P33261 490 aa17.04■□□□□ 0.32
CCDC58-207ENST00000498466 ZAP70P43403 619 aa17.04■□□□□ 0.32
CCDC58-207ENST00000498466 USP5P45974 858 aa17.04■□□□□ 0.32
CCDC58-207ENST00000498466 RTP1P59025 263 aa17.04■□□□□ 0.32
CCDC58-207ENST00000498466 OS9Q13438 667 aaPredicted RBP17.04■□□□□ 0.32
CCDC58-207ENST00000498466 GPR108Q9NPR9 543 aa17.04■□□□□ 0.32
CCDC58-207ENST00000498466 ATP11BQ9Y2G3 1177 aa17.04■□□□□ 0.32
CCDC58-207ENST00000498466 HOXC6P09630 235 aa17.03■□□□□ 0.32
CCDC58-207ENST00000498466 VCAM1P19320 739 aa17.03■□□□□ 0.32
CCDC58-207ENST00000498466 CYP7A1P22680 504 aa17.03■□□□□ 0.32
CCDC58-207ENST00000498466 C1QBPQ07021 282 aaKnown RBP17.03■□□□□ 0.32
CCDC58-207ENST00000498466 GRB14Q14449 540 aa17.03■□□□□ 0.32
CCDC58-207ENST00000498466 TATDN1Q6P1N9 297 aa17.03■□□□□ 0.32
CCDC58-207ENST00000498466 NPLOC4Q8TAT6 608 aa17.03■□□□□ 0.32
CCDC58-207ENST00000498466 KIAA1683Q9H0B3 1180 aa17.03■□□□□ 0.32
CCDC58-207ENST00000498466 PIH1D3Q9NQM4 214 aaKnown RBP17.03■□□□□ 0.32
CCDC58-207ENST00000498466 BTBD7Q9P203 1132 aa17.03■□□□□ 0.32
CCDC58-207ENST00000498466 SERPINB13Q9UIV8 391 aa17.03■□□□□ 0.32
CCDC58-207ENST00000498466 SPTBN5Q9NRC6 3674 aaKnown RBP17.02■□□□□ 0.32
CCDC58-207ENST00000498466 IPO8O15397 1037 aaKnown RBP17.02■□□□□ 0.32
CCDC58-207ENST00000498466 IGSF3O75054 1194 aa17.02■□□□□ 0.32
CCDC58-207ENST00000498466 ABCB5Q2M3G0 1257 aa17.02■□□□□ 0.32
CCDC58-207ENST00000498466 CERKLQ49MI3 558 aaPredicted RBP17.02■□□□□ 0.32
CCDC58-207ENST00000498466 GJC2Q5T442 439 aaPredicted RBP17.02■□□□□ 0.32
CCDC58-207ENST00000498466 LBX2Q6XYB7 198 aa17.02■□□□□ 0.32
CCDC58-207ENST00000498466 MIGA1Q8NAN2 632 aa17.02■□□□□ 0.32
CCDC58-207ENST00000498466 ACER1Q8TDN7 264 aa17.02■□□□□ 0.32
CCDC58-207ENST00000498466 RPAP3Q9H6T3 665 aaPredicted RBP17.02■□□□□ 0.32
CCDC58-207ENST00000498466 PRDM5Q9NQX1 630 aaPredicted RBP17.02■□□□□ 0.32
CCDC58-207ENST00000498466 PRUNE2Q8WUY3 3088 aa17.02■□□□□ 0.31
CCDC58-207ENST00000498466 CDH23Q9H251 3354 aa17.02■□□□□ 0.31
CCDC58-207ENST00000498466 IDH1O75874 414 aaKnown RBP17.01■□□□□ 0.31
CCDC58-207ENST00000498466 TRIM27P14373 513 aa17.01■□□□□ 0.31
CCDC58-207ENST00000498466 DPP9Q86TI2 863 aa17.01■□□□□ 0.31
CCDC58-207ENST00000498466 ARRDC4Q8NCT1 418 aa17.01■□□□□ 0.31
CCDC58-207ENST00000498466 TRPV1Q8NER1 839 aa17.01■□□□□ 0.31
CCDC58-207ENST00000498466 ZNF512BQ96KM6 892 aaPredicted RBP17.01■□□□□ 0.31
CCDC58-207ENST00000498466 EHD4Q9H223 541 aa17.01■□□□□ 0.31
CCDC58-207ENST00000498466 CABP5Q9NP86 173 aa17.01■□□□□ 0.31
CCDC58-207ENST00000498466 FRMPD3Q5JV73 1810 aa17■□□□□ 0.31
CCDC58-207ENST00000498466 FOCADQ5VW36 1801 aa17■□□□□ 0.31
CCDC58-207ENST00000498466 SPDYE16A6NNV3 312 aaPredicted RBP17■□□□□ 0.31
CCDC58-207ENST00000498466 KBTBD13C9JR72 458 aa17■□□□□ 0.31
CCDC58-207ENST00000498466 MYCNP04198 464 aaPredicted RBP17■□□□□ 0.31
CCDC58-207ENST00000498466 CYBAP13498 195 aa17■□□□□ 0.31
CCDC58-207ENST00000498466 SHHQ15465 462 aa17■□□□□ 0.31
CCDC58-207ENST00000498466 ANO1Q5XXA6 986 aa17■□□□□ 0.31
CCDC58-207ENST00000498466 TTC6Q86TZ1 520 aa17■□□□□ 0.31
CCDC58-207ENST00000498466 CERS3Q8IU89 383 aa17■□□□□ 0.31
CCDC58-207ENST00000498466 FRAT1Q92837 279 aaPredicted RBP17■□□□□ 0.31
CCDC58-207ENST00000498466 CLUAP1Q96AJ1 413 aa17■□□□□ 0.31
CCDC58-207ENST00000498466 CDK5RAP2Q96SN8 1893 aa17■□□□□ 0.31
CCDC58-207ENST00000498466 CDX2Q99626 313 aaPredicted RBP17■□□□□ 0.31
CCDC58-207ENST00000498466 TNNQ9UQP3 1299 aa17■□□□□ 0.31
CCDC58-207ENST00000498466 SURF6O75683 361 aaKnown RBP16.99■□□□□ 0.31
CCDC58-207ENST00000498466 SLC39A5Q6ZMH5 540 aa16.99■□□□□ 0.31
CCDC58-207ENST00000498466 MAGEB6Q8N7X4 407 aa16.99■□□□□ 0.31
CCDC58-207ENST00000498466 MAFAQ8NHW3 353 aaPredicted RBP16.99■□□□□ 0.31
CCDC58-207ENST00000498466 SEMA6BQ9H3T3 888 aa16.99■□□□□ 0.31
CCDC58-207ENST00000498466 ADORA2AP29274 412 aa16.98■□□□□ 0.31
CCDC58-207ENST00000498466 POLA2Q14181 598 aa16.98■□□□□ 0.31
CCDC58-207ENST00000498466 C9orf50Q5SZB4 431 aa16.98■□□□□ 0.31
CCDC58-207ENST00000498466 BADQ92934 168 aa16.98■□□□□ 0.31
CCDC58-207ENST00000498466 DBNLQ9UJU6 430 aaKnown RBP16.98■□□□□ 0.31
CCDC58-207ENST00000498466 STRNO43815 780 aa16.97■□□□□ 0.31
CCDC58-207ENST00000498466 SHMT1P34896 483 aa16.97■□□□□ 0.31
CCDC58-207ENST00000498466 TRIM60Q495X7 471 aa16.97■□□□□ 0.31
CCDC58-207ENST00000498466 OLFML2BQ68BL8 750 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms