RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 ATG3Q9NT62 314 aa6.95□□□□□ -1.3
HMGXB4-208ENST00000498325 TTC21BQ7Z4L5 1316 aa6.95□□□□□ -1.3
HMGXB4-208ENST00000498325 TTC21AQ8NDW8 1320 aa6.95□□□□□ -1.3
HMGXB4-208ENST00000498325 AKAP12Q02952 1782 aa6.95□□□□□ -1.3
HMGXB4-208ENST00000498325 TOPAZ1Q8N9V7 1692 aa6.94□□□□□ -1.3
HMGXB4-208ENST00000498325 MON2Q7Z3U7 1717 aa6.94□□□□□ -1.3
HMGXB4-208ENST00000498325 EPHA1P21709 976 aa6.94□□□□□ -1.3
HMGXB4-208ENST00000498325 FSTL1Q12841 308 aa6.94□□□□□ -1.3
HMGXB4-208ENST00000498325 COX20Q5RI15 118 aa6.94□□□□□ -1.3
HMGXB4-208ENST00000498325 GLMNQ92990 594 aa6.94□□□□□ -1.3
HMGXB4-208ENST00000498325 KLHDC7BQ96G42 594 aa6.94□□□□□ -1.3
HMGXB4-208ENST00000498325 RNF208Q9H0X6 261 aa6.94□□□□□ -1.3
HMGXB4-208ENST00000498325 RASSF4Q9H2L5 321 aa6.94□□□□□ -1.3
HMGXB4-208ENST00000498325 PNNQ9H307 717 aaKnown RBP6.94□□□□□ -1.3
HMGXB4-208ENST00000498325 SH2B1Q9NRF2 756 aaPredicted RBP6.94□□□□□ -1.3
HMGXB4-208ENST00000498325 LMO7Q8WWI1 1683 aa6.93□□□□□ -1.3
HMGXB4-208ENST00000498325 FOXN1O15353 648 aa6.93□□□□□ -1.3
HMGXB4-208ENST00000498325 NEFLP07196 543 aa6.93□□□□□ -1.3
HMGXB4-208ENST00000498325 SCNN1AP37088 669 aa6.93□□□□□ -1.3
HMGXB4-208ENST00000498325 RGS19P49795 217 aa6.93□□□□□ -1.3
HMGXB4-208ENST00000498325 FDX2Q6P4F2 183 aa6.93□□□□□ -1.3
HMGXB4-208ENST00000498325 ADAMTSL4Q6UY14 1074 aa6.93□□□□□ -1.3
HMGXB4-208ENST00000498325 CBLL1Q75N03 491 aa6.93□□□□□ -1.3
HMGXB4-208ENST00000498325 COL26A1Q96A83 441 aa6.93□□□□□ -1.3
HMGXB4-208ENST00000498325 ABHD8Q96I13 439 aa6.93□□□□□ -1.3
HMGXB4-208ENST00000498325 FBXL18Q96ME1 805 aa6.93□□□□□ -1.3
HMGXB4-208ENST00000498325 CCDC39Q9UFE4 941 aa6.93□□□□□ -1.3
HMGXB4-208ENST00000498325 USP6P35125 1406 aa6.93□□□□□ -1.3
HMGXB4-208ENST00000498325 CRB1P82279 1406 aa6.93□□□□□ -1.3
HMGXB4-208ENST00000498325 COL5A2P05997 1499 aaPredicted RBP6.92□□□□□ -1.3
HMGXB4-208ENST00000498325 GAS2O43903 313 aaKnown RBP6.92□□□□□ -1.3
HMGXB4-208ENST00000498325 DIAPH1O60610 1272 aaKnown RBP6.92□□□□□ -1.3
HMGXB4-208ENST00000498325 FOSL1P15407 271 aa6.92□□□□□ -1.3
HMGXB4-208ENST00000498325 PTPRAP18433 802 aa6.92□□□□□ -1.3
HMGXB4-208ENST00000498325 MSMPQ1L6U9 139 aa6.92□□□□□ -1.3
HMGXB4-208ENST00000498325 TTC39BQ5VTQ0 682 aaPredicted RBP6.92□□□□□ -1.3
HMGXB4-208ENST00000498325 NME9Q86XW9 330 aa6.92□□□□□ -1.3
HMGXB4-208ENST00000498325 TP53INP2Q8IXH6 220 aa6.92□□□□□ -1.3
HMGXB4-208ENST00000498325 ETFBKMTQ8IXQ9 262 aa6.92□□□□□ -1.3
HMGXB4-208ENST00000498325 FBXL6Q8N531 539 aa6.92□□□□□ -1.3
HMGXB4-208ENST00000498325 ACSBG1Q96GR2 724 aa6.92□□□□□ -1.3
HMGXB4-208ENST00000498325 OSBPL1AQ9BXW6 950 aa6.92□□□□□ -1.3
HMGXB4-208ENST00000498325 KRTAP4-2Q9BYR5 136 aa6.92□□□□□ -1.3
HMGXB4-208ENST00000498325 VRTNQ9H8Y1 702 aa6.92□□□□□ -1.3
HMGXB4-208ENST00000498325 CD2APQ9Y5K6 639 aa6.92□□□□□ -1.3
HMGXB4-208ENST00000498325 NEFMP07197 916 aa6.91□□□□□ -1.3
HMGXB4-208ENST00000498325 JUNBP17275 347 aaPredicted RBP6.91□□□□□ -1.3
HMGXB4-208ENST00000498325 MAP4P27816 1152 aaKnown RBP6.91□□□□□ -1.3
HMGXB4-208ENST00000498325 PIK3R5Q8WYR1 880 aa6.91□□□□□ -1.3
HMGXB4-208ENST00000498325 RUNDC1Q96C34 613 aa6.91□□□□□ -1.3
HMGXB4-208ENST00000498325 RUSC1Q9BVN2 902 aa6.91□□□□□ -1.3
HMGXB4-208ENST00000498325 PBX4Q9BYU1 374 aa6.91□□□□□ -1.3
HMGXB4-208ENST00000498325 POLKQ9UBT6 870 aa6.91□□□□□ -1.3
HMGXB4-208ENST00000498325 USP19O94966 1318 aa6.91□□□□□ -1.3
HMGXB4-208ENST00000498325 A6NJR5 290 aa6.9□□□□□ -1.3
HMGXB4-208ENST00000498325 U2SURPO15042 1029 aaKnown RBP6.9□□□□□ -1.3
HMGXB4-208ENST00000498325 PRNPP04156 253 aa6.9□□□□□ -1.3
HMGXB4-208ENST00000498325 F13BP05160 661 aa6.9□□□□□ -1.3
HMGXB4-208ENST00000498325 U2AF1L5P0DN76 240 aaPredicted RBP6.9□□□□□ -1.3
HMGXB4-208ENST00000498325 BRD2P25440 801 aaKnown RBP6.9□□□□□ -1.3
HMGXB4-208ENST00000498325 CABP4P57796 275 aa6.9□□□□□ -1.3
HMGXB4-208ENST00000498325 U2AF1Q01081 240 aaKnown RBP eCLIP6.9□□□□□ -1.3
HMGXB4-208ENST00000498325 FLIIQ13045 1269 aa6.9□□□□□ -1.3
HMGXB4-208ENST00000498325 CPSF6Q16630 551 aaKnown RBP eCLIP6.9□□□□□ -1.3
HMGXB4-208ENST00000498325 VSIG10LQ86VR7 867 aa6.9□□□□□ -1.3
HMGXB4-208ENST00000498325 COL23A1Q86Y22 540 aaPredicted RBP6.9□□□□□ -1.3
HMGXB4-208ENST00000498325 C16orf71Q8IYS4 520 aaPredicted RBP6.9□□□□□ -1.3
HMGXB4-208ENST00000498325 WNT8BQ93098 351 aa6.9□□□□□ -1.3
HMGXB4-208ENST00000498325 PRDM10Q9NQV6 1147 aa6.9□□□□□ -1.3
HMGXB4-208ENST00000498325 FAM13BQ9NYF5 915 aa6.9□□□□□ -1.3
HMGXB4-208ENST00000498325 TFCP2L1Q9NZI6 479 aa6.9□□□□□ -1.3
HMGXB4-208ENST00000498325 IGSF1Q8N6C5 1336 aa6.9□□□□□ -1.3
HMGXB4-208ENST00000498325 CPDO75976 1380 aa6.9□□□□□ -1.31
HMGXB4-208ENST00000498325 USP31Q70CQ4 1352 aa6.9□□□□□ -1.31
HMGXB4-208ENST00000498325 SMG6Q86US8 1419 aaKnown RBP6.9□□□□□ -1.31
HMGXB4-208ENST00000498325 MAP2P11137 1827 aaKnown RBP6.9□□□□□ -1.31
HMGXB4-208ENST00000498325 H3BRJ5 948 aa6.89□□□□□ -1.31
HMGXB4-208ENST00000498325 APAF1O14727 1248 aa6.89□□□□□ -1.31
HMGXB4-208ENST00000498325 PPM1GO15355 546 aaPredicted RBP6.89□□□□□ -1.31
HMGXB4-208ENST00000498325 KIF4AO95239 1232 aa6.89□□□□□ -1.31
HMGXB4-208ENST00000498325 ITGB5P18084 799 aa6.89□□□□□ -1.31
HMGXB4-208ENST00000498325 NLRP12P59046 1061 aa6.89□□□□□ -1.31
HMGXB4-208ENST00000498325 SGO2Q562F6 1265 aa6.89□□□□□ -1.31
HMGXB4-208ENST00000498325 NCAPG2Q86XI2 1143 aa6.89□□□□□ -1.31
HMGXB4-208ENST00000498325 CCDC146Q8IYE0 955 aa6.89□□□□□ -1.31
HMGXB4-208ENST00000498325 POP1Q99575 1024 aaKnown RBP6.89□□□□□ -1.31
HMGXB4-208ENST00000498325 PPP1R12CQ9BZL4 782 aa6.89□□□□□ -1.31
HMGXB4-208ENST00000498325 ADAM19Q9H013 955 aa6.89□□□□□ -1.31
HMGXB4-208ENST00000498325 OSGEPQ9NPF4 335 aa6.89□□□□□ -1.31
HMGXB4-208ENST00000498325 FNDC3AQ9Y2H6 1198 aaKnown RBP6.89□□□□□ -1.31
HMGXB4-208ENST00000498325 MAPK8IP3Q9UPT6 1336 aa6.88□□□□□ -1.31
HMGXB4-208ENST00000498325 CCDC85CA6NKD9 419 aa6.88□□□□□ -1.31
HMGXB4-208ENST00000498325 FKBP5Q13451 457 aaPredicted RBP6.88□□□□□ -1.31
HMGXB4-208ENST00000498325 NFXL1Q6ZNB6 911 aa6.88□□□□□ -1.31
HMGXB4-208ENST00000498325 TOM1L2Q6ZVM7 507 aa6.88□□□□□ -1.31
HMGXB4-208ENST00000498325 ABTB2Q8N961 1025 aa6.88□□□□□ -1.31
HMGXB4-208ENST00000498325 SUPT16HQ9Y5B9 1047 aaKnown RBP6.88□□□□□ -1.31
HMGXB4-208ENST00000498325 CICQ96RK0 1608 aaPredicted RBP6.87□□□□□ -1.31
HMGXB4-208ENST00000498325 FAM26DQ5JW98 314 aa6.87□□□□□ -1.31
HMGXB4-208ENST00000498325 CEP120Q8N960 986 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms