RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 ZNF804AQ7Z570 1209 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 CMTR2Q8IYT2 770 aaKnown RBP1.73□□□□□ -2.13
XRN1-214ENST00000498077 UBR7Q8N806 425 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 ZNF511Q8NB15 262 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 ZNF333Q96JL9 665 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 SMC6Q96SB8 1091 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 C7orf25Q9BPX7 421 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 RBSNQ9H1K0 784 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 TOP2AP11388 1531 aaKnown RBP1.73□□□□□ -2.13
XRN1-214ENST00000498077 SORL1Q92673 2214 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 CLGNO14967 610 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 CYP3A5P20815 502 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 NOS3P29474 1203 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 ABL2P42684 1182 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 CBX1P83916 185 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 SH3D19Q5HYK7 790 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 CAVIN1Q6NZI2 390 aaKnown RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 RSBN1LQ6PCB5 846 aaPredicted RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 PROSER2Q86WR7 435 aaPredicted RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 TRMT44Q8IYL2 757 aaKnown RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 NKX2-3Q8TAU0 364 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 RAB24Q969Q5 203 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 ZNF594Q96JF6 807 aaPredicted RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 ZSCAN31Q96LW9 406 aaPredicted RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 PLA2G2FQ9BZM2 168 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 BTBD1Q9H0C5 482 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 ABCG4Q9H172 646 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 DEF6Q9H4E7 631 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 CHST11Q9NPF2 352 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 RAB6BQ9NRW1 208 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 ARHGEF38Q9NXL2 777 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 GDF2Q9UK05 429 aaPredicted RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 ADAM21Q9UKJ8 722 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 RUVBL1Q9Y265 456 aaKnown RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 MED13Q9UHV7 2174 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 TTC21AQ8NDW8 1320 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 TMEM88BA6NKF7 163 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 ATP5J2-PTCD1G3V325 749 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 GOLGA6L22H0YM25 854 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 DVL1O14640 695 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 PTCD1O75127 700 aaKnown RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 RHOBTB3O94955 611 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 ZIC2O95409 532 aaPredicted RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 ARSAP15289 507 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 SSTR4P31391 388 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 CLCN5P51795 746 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 DVL1P1P54792 670 aaPredicted RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 BRPF1P55201 1214 aaPredicted RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 CRMP1Q14194 572 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 LRRC36Q1X8D7 754 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 UVSSAQ2YD98 709 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 CEP85Q6P2H3 762 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 PRR23BQ6ZRT6 265 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 DHX30Q7L2E3 1194 aaKnown RBP eCLIP1.72□□□□□ -2.13
XRN1-214ENST00000498077 ADAT2Q7Z6V5 191 aaKnown RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 ZZZ3Q8IYH5 903 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 GOLGA6L1Q8N7Z2 621 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 HHIPL1Q96JK4 782 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 GRIP2Q9C0E4 1043 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 ZCCHC4Q9H5U6 513 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 NPDC1Q9NQX5 325 aaPredicted RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 TOR4AQ9NXH8 423 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 EVLQ9UI08 416 aaPredicted RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 PRO0461Q9UI25 63 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 RAI2Q9Y5P3 530 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 SPATA31E1Q6ZUB1 1445 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 FAM229AH3BQW9 127 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 PPP1R12AO14974 1030 aaPredicted RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 TLL1O43897 1013 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 RAD17O75943 681 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 GFPT2O94808 682 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 PCSK2P16519 638 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 GPX3P22352 226 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 AP3B2Q13367 1082 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 FAM50AQ14320 339 aaKnown RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 PUM1Q14671 1186 aaKnown RBP eCLIP1.72□□□□□ -2.13
XRN1-214ENST00000498077 PUS10Q3MIT2 529 aaKnown RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 CC2D2BQ6DHV5 1058 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 SHISA2Q6UWI4 295 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 DHX37Q8IY37 1157 aaKnown RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 FBXO15Q8NCQ5 510 aaPredicted RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 OR5B17Q8NGF7 314 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 C1orf216Q8TAB5 229 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 RERGQ96A58 199 aaPredicted RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 MRGPRX2Q96LB1 330 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 LRRC37BQ96QE4 947 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 CFHR5Q9BXR6 569 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 MAGEL2Q9UJ55 1249 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 MKL2Q9ULH7 1088 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 ISY1Q9ULR0 285 aaKnown RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 SPG7Q9UQ90 795 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 NOTCH2Q04721 2471 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 ERBINQ96RT1 1412 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 PIK3R4Q99570 1358 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 WDR33Q9C0J8 1336 aaKnown RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 ANTXRLA6NF34 631 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 KHNYNO15037 678 aaKnown RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 WIPF1O43516 503 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 HEXIM1O94992 359 aaKnown RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 TBC1D8O95759 1140 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms