RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 DNAJC2Q99543 621 aaKnown RBP22.51■■□□□ 1.19
PRKCB-209ENST00000498058 BCL11AQ9H165 835 aa22.51■■□□□ 1.19
PRKCB-209ENST00000498058 ZNF532Q9HCE3 1301 aa22.51■■□□□ 1.19
PRKCB-209ENST00000498058 CHGBP05060 677 aa22.5■■□□□ 1.19
PRKCB-209ENST00000498058 CCL14Q16627 93 aa22.5■■□□□ 1.19
PRKCB-209ENST00000498058 MORN1Q5T089 497 aa22.5■■□□□ 1.19
PRKCB-209ENST00000498058 CLASRPQ8N2M8 674 aaKnown RBP22.5■■□□□ 1.19
PRKCB-209ENST00000498058 LCORLQ8N3X6 602 aa22.5■■□□□ 1.19
PRKCB-209ENST00000498058 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.5■■□□□ 1.19
PRKCB-209ENST00000498058 SDR42E1Q8WUS8 393 aa22.5■■□□□ 1.19
PRKCB-209ENST00000498058 NUDT12Q9BQG2 462 aa22.5■■□□□ 1.19
PRKCB-209ENST00000498058 HMX1Q9NP08 348 aaPredicted RBP22.5■■□□□ 1.19
PRKCB-209ENST00000498058 SZT2Q5T011 3432 aa22.5■■□□□ 1.19
PRKCB-209ENST00000498058 SMIM22K7EJ46 135 aa22.49■■□□□ 1.19
PRKCB-209ENST00000498058 CYP2D6P10635 497 aa22.49■■□□□ 1.19
PRKCB-209ENST00000498058 TTF1Q15361 905 aaPredicted RBP22.49■■□□□ 1.19
PRKCB-209ENST00000498058 TMED8Q6PL24 325 aaPredicted RBP22.49■■□□□ 1.19
PRKCB-209ENST00000498058 CATSPERGQ6ZRH7 1159 aa22.49■■□□□ 1.19
PRKCB-209ENST00000498058 GPR142Q7Z601 462 aa22.49■■□□□ 1.19
PRKCB-209ENST00000498058 FEZ1Q99689 392 aa22.49■■□□□ 1.19
PRKCB-209ENST00000498058 KIAA1683Q9H0B3 1180 aa22.49■■□□□ 1.19
PRKCB-209ENST00000498058 USP17L15C9J2P7 530 aa22.48■■□□□ 1.19
PRKCB-209ENST00000498058 USP17L13C9JLJ4 530 aa22.48■■□□□ 1.19
PRKCB-209ENST00000498058 USP17L11C9JVI0 530 aa22.48■■□□□ 1.19
PRKCB-209ENST00000498058 USP17L18D6R9N7 530 aa22.48■■□□□ 1.19
PRKCB-209ENST00000498058 USP17L22D6RA61 530 aa22.48■■□□□ 1.19
PRKCB-209ENST00000498058 USP17L17D6RBQ6 530 aa22.48■■□□□ 1.19
PRKCB-209ENST00000498058 USP17L19D6RCP7 530 aa22.48■■□□□ 1.19
PRKCB-209ENST00000498058 USP17L20D6RJB6 530 aa22.48■■□□□ 1.19
PRKCB-209ENST00000498058 POLR3DP05423 398 aaPredicted RBP22.48■■□□□ 1.19
PRKCB-209ENST00000498058 XRCC5P13010 732 aaKnown RBP22.48■■□□□ 1.19
PRKCB-209ENST00000498058 PRKAR2AP13861 404 aaKnown RBP22.48■■□□□ 1.19
PRKCB-209ENST00000498058 VCAM1P19320 739 aa22.48■■□□□ 1.19
PRKCB-209ENST00000498058 MAPK4P31152 587 aa22.48■■□□□ 1.19
PRKCB-209ENST00000498058 USP17L24Q0WX57 530 aa22.48■■□□□ 1.19
PRKCB-209ENST00000498058 SEPT2Q15019 361 aa22.48■■□□□ 1.19
PRKCB-209ENST00000498058 DDX19BQ9UMR2 479 aa22.48■■□□□ 1.19
PRKCB-209ENST00000498058 NR2E3Q9Y5X4 410 aa22.48■■□□□ 1.19
PRKCB-209ENST00000498058 BAZ2AQ9UIF9 1905 aaKnown RBP22.47■■□□□ 1.19
PRKCB-209ENST00000498058 A0A1W2PRG0 241 aa22.47■■□□□ 1.19
PRKCB-209ENST00000498058 PRKAB2O43741 272 aa22.47■■□□□ 1.19
PRKCB-209ENST00000498058 EVI5O60447 810 aa22.47■■□□□ 1.19
PRKCB-209ENST00000498058 IFIT2P09913 472 aaKnown RBP22.47■■□□□ 1.19
PRKCB-209ENST00000498058 MS4A1P11836 297 aa22.47■■□□□ 1.19
PRKCB-209ENST00000498058 CAPN2P17655 700 aa22.47■■□□□ 1.19
PRKCB-209ENST00000498058 CACNB2Q08289 660 aaPredicted RBP22.47■■□□□ 1.19
PRKCB-209ENST00000498058 C20orf194Q5TEA3 1177 aa22.47■■□□□ 1.19
PRKCB-209ENST00000498058 SLC44A5Q8NCS7 719 aa22.47■■□□□ 1.19
PRKCB-209ENST00000498058 SOCS4Q8WXH5 440 aa22.47■■□□□ 1.19
PRKCB-209ENST00000498058 BOLA2Q9H3K6 86 aa22.47■■□□□ 1.19
PRKCB-209ENST00000498058 DCP1AQ9NPI6 582 aaPredicted RBP22.47■■□□□ 1.19
PRKCB-209ENST00000498058 MCM9Q9NXL9 1143 aa22.47■■□□□ 1.19
PRKCB-209ENST00000498058 BTBD7Q9P203 1132 aa22.47■■□□□ 1.19
PRKCB-209ENST00000498058 NECAB2Q7Z6G3 386 aa22.46■■□□□ 1.19
PRKCB-209ENST00000498058 PLEKHH3Q7Z736 793 aa22.46■■□□□ 1.19
PRKCB-209ENST00000498058 CRNKL1Q9BZJ0 848 aaKnown RBP22.46■■□□□ 1.19
PRKCB-209ENST00000498058 ARMT1Q9H993 441 aa22.46■■□□□ 1.19
PRKCB-209ENST00000498058 OGDHLQ9ULD0 1010 aa22.46■■□□□ 1.19
PRKCB-209ENST00000498058 RABGAP1Q9Y3P9 1069 aa22.46■■□□□ 1.19
PRKCB-209ENST00000498058 RLFQ13129 1914 aa22.46■■□□□ 1.19
PRKCB-209ENST00000498058 HMMRO75330 724 aa22.45■■□□□ 1.18
PRKCB-209ENST00000498058 CCND3P30281 292 aaPredicted RBP22.45■■□□□ 1.18
PRKCB-209ENST00000498058 USP14P54578 494 aa22.45■■□□□ 1.18
PRKCB-209ENST00000498058 KIAA1755Q5JYT7 1200 aa22.45■■□□□ 1.18
PRKCB-209ENST00000498058 ANKLE1Q8NAG6 615 aa22.45■■□□□ 1.18
PRKCB-209ENST00000498058 GTF3C2Q8WUA4 911 aaPredicted RBP22.45■■□□□ 1.18
PRKCB-209ENST00000498058 DYNLL2Q96FJ2 89 aa22.45■■□□□ 1.18
PRKCB-209ENST00000498058 CABP5Q9NP86 173 aa22.45■■□□□ 1.18
PRKCB-209ENST00000498058 FLRT1Q9NZU1 646 aa22.45■■□□□ 1.18
PRKCB-209ENST00000498058 SPDYE16A6NNV3 312 aaPredicted RBP22.44■■□□□ 1.18
PRKCB-209ENST00000498058 RAB11FIP3O75154 756 aa22.44■■□□□ 1.18
PRKCB-209ENST00000498058 CENPBP07199 599 aaPredicted RBP22.44■■□□□ 1.18
PRKCB-209ENST00000498058 ADD2P35612 726 aa22.44■■□□□ 1.18
PRKCB-209ENST00000498058 PDE3AQ14432 1141 aa22.44■■□□□ 1.18
PRKCB-209ENST00000498058 LBX2Q6XYB7 198 aa22.44■■□□□ 1.18
PRKCB-209ENST00000498058 RPAP3Q9H6T3 665 aaPredicted RBP22.44■■□□□ 1.18
PRKCB-209ENST00000498058 PAG1Q9NWQ8 432 aa22.44■■□□□ 1.18
PRKCB-209ENST00000498058 STAP2Q9UGK3 403 aa22.44■■□□□ 1.18
PRKCB-209ENST00000498058 MYH7P12883 1935 aa22.43■■□□□ 1.18
PRKCB-209ENST00000498058 MYH8P13535 1937 aa22.43■■□□□ 1.18
PRKCB-209ENST00000498058 PFASO15067 1338 aa22.43■■□□□ 1.18
PRKCB-209ENST00000498058 ZKSCAN1P17029 563 aaPredicted RBP22.43■■□□□ 1.18
PRKCB-209ENST00000498058 ATP5JP18859 108 aa22.43■■□□□ 1.18
PRKCB-209ENST00000498058 RGS2P41220 211 aa22.43■■□□□ 1.18
PRKCB-209ENST00000498058 CLEC10AQ8IUN9 316 aa22.43■■□□□ 1.18
PRKCB-209ENST00000498058 SIAH1Q8IUQ4 282 aa22.43■■□□□ 1.18
PRKCB-209ENST00000498058 RCAN3Q9UKA8 241 aa22.43■■□□□ 1.18
PRKCB-209ENST00000498058 FRMPD3Q5JV73 1810 aa22.43■■□□□ 1.18
PRKCB-209ENST00000498058 CYP2D7A0A087X1C5 515 aa22.42■■□□□ 1.18
PRKCB-209ENST00000498058 MBD4O95243 580 aa22.42■■□□□ 1.18
PRKCB-209ENST00000498058 MAP2K5Q13163 448 aa22.42■■□□□ 1.18
PRKCB-209ENST00000498058 LHX8Q68G74 356 aa22.42■■□□□ 1.18
PRKCB-209ENST00000498058 C7orf61Q8IZ16 206 aa22.42■■□□□ 1.18
PRKCB-209ENST00000498058 APBA2Q99767 749 aa22.42■■□□□ 1.18
PRKCB-209ENST00000498058 HAUS7Q99871 368 aa22.42■■□□□ 1.18
PRKCB-209ENST00000498058 NBPF3Q9H094 633 aa22.42■■□□□ 1.18
PRKCB-209ENST00000498058 MPHOSPH10O00566 681 aaKnown RBP22.41■■□□□ 1.18
PRKCB-209ENST00000498058 SMARCA5O60264 1052 aaPredicted RBP22.41■■□□□ 1.18
PRKCB-209ENST00000498058 PTPREP23469 700 aa22.41■■□□□ 1.18
PRKCB-209ENST00000498058 CCAR1Q8IX12 1150 aaKnown RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms