RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 MSMPQ1L6U9 139 aa4.74□□□□□ -1.65
RIF1-212ENST00000498041 ZNF648Q5T619 568 aaPredicted RBP4.74□□□□□ -1.65
RIF1-212ENST00000498041 GK5Q6ZS86 529 aa4.74□□□□□ -1.65
RIF1-212ENST00000498041 SLFN12Q8IYM2 578 aa4.74□□□□□ -1.65
RIF1-212ENST00000498041 RIN3Q8TB24 985 aa4.74□□□□□ -1.65
RIF1-212ENST00000498041 CYB5D2Q8WUJ1 264 aa4.74□□□□□ -1.65
RIF1-212ENST00000498041 SPATA32Q96LK8 384 aa4.74□□□□□ -1.65
RIF1-212ENST00000498041 HEXIM2Q96MH2 286 aaKnown RBP4.74□□□□□ -1.65
RIF1-212ENST00000498041 CCSER2Q9H7U1 834 aa4.74□□□□□ -1.65
RIF1-212ENST00000498041 PRDM5Q9NQX1 630 aaPredicted RBP4.74□□□□□ -1.65
RIF1-212ENST00000498041 ZC3H7BQ9UGR2 993 aaKnown RBP4.74□□□□□ -1.65
RIF1-212ENST00000498041 KLHL3Q9UH77 587 aa4.74□□□□□ -1.65
RIF1-212ENST00000498041 TPX2Q9ULW0 747 aaKnown RBP4.74□□□□□ -1.65
RIF1-212ENST00000498041 MAPK8IP1Q9UQF2 711 aa4.74□□□□□ -1.65
RIF1-212ENST00000498041 ARID1BQ8NFD5 2236 aaPredicted RBP4.73□□□□□ -1.65
RIF1-212ENST00000498041 SLC22A31A6NKX4 558 aa4.73□□□□□ -1.65
RIF1-212ENST00000498041 CYP7A1P22680 504 aa4.73□□□□□ -1.65
RIF1-212ENST00000498041 ERCC5P28715 1186 aaPredicted RBP4.73□□□□□ -1.65
RIF1-212ENST00000498041 ETV3P41162 512 aa4.73□□□□□ -1.65
RIF1-212ENST00000498041 OXCT1P55809 520 aa4.73□□□□□ -1.65
RIF1-212ENST00000498041 COL9A2Q14055 689 aaPredicted RBP4.73□□□□□ -1.65
RIF1-212ENST00000498041 LRRFIP1Q32MZ4 808 aaKnown RBP4.73□□□□□ -1.65
RIF1-212ENST00000498041 SFRP5Q5T4F7 317 aa4.73□□□□□ -1.65
RIF1-212ENST00000498041 CDH24Q86UP0 819 aa4.73□□□□□ -1.65
RIF1-212ENST00000498041 VSIG10LQ86VR7 867 aa4.73□□□□□ -1.65
RIF1-212ENST00000498041 FAM181AQ8N9Y4 354 aa4.73□□□□□ -1.65
RIF1-212ENST00000498041 NETO1Q8TDF5 533 aa4.73□□□□□ -1.65
RIF1-212ENST00000498041 GPRASP2Q96D09 838 aa4.73□□□□□ -1.65
RIF1-212ENST00000498041 COX4I2Q96KJ9 171 aa4.73□□□□□ -1.65
RIF1-212ENST00000498041 FBXL18Q96ME1 805 aa4.73□□□□□ -1.65
RIF1-212ENST00000498041 BSDC1Q9NW68 430 aaPredicted RBP4.73□□□□□ -1.65
RIF1-212ENST00000498041 GMIPQ9P107 970 aa4.73□□□□□ -1.65
RIF1-212ENST00000498041 CEP131Q9UPN4 1083 aa4.73□□□□□ -1.65
RIF1-212ENST00000498041 GNAT3A8MTJ3 354 aa4.72□□□□□ -1.65
RIF1-212ENST00000498041 DNAJA2O60884 412 aa4.72□□□□□ -1.65
RIF1-212ENST00000498041 CEACAM5P06731 702 aa4.72□□□□□ -1.65
RIF1-212ENST00000498041 IMPDH2P12268 514 aa4.72□□□□□ -1.65
RIF1-212ENST00000498041 GJA8P48165 433 aa4.72□□□□□ -1.65
RIF1-212ENST00000498041 IFI16Q16666 785 aaKnown RBP4.72□□□□□ -1.65
RIF1-212ENST00000498041 C22orf34Q6ZV56 151 aa4.72□□□□□ -1.65
RIF1-212ENST00000498041 PHACTR4Q8IZ21 702 aa4.72□□□□□ -1.65
RIF1-212ENST00000498041 DNAJB8Q8NHS0 232 aa4.72□□□□□ -1.65
RIF1-212ENST00000498041 RASGRP4Q8TDF6 673 aa4.72□□□□□ -1.65
RIF1-212ENST00000498041 CCDC74BQ96LY2 380 aa4.72□□□□□ -1.65
RIF1-212ENST00000498041 ACBD3Q9H3P7 528 aa4.72□□□□□ -1.65
RIF1-212ENST00000498041 INPP5FQ9Y2H2 1132 aa4.72□□□□□ -1.65
RIF1-212ENST00000498041 TMEM265A0A087WTH1 108 aa4.71□□□□□ -1.66
RIF1-212ENST00000498041 PRNPP04156 253 aa4.71□□□□□ -1.66
RIF1-212ENST00000498041 RAG1P15918 1043 aa4.71□□□□□ -1.66
RIF1-212ENST00000498041 ITIH2P19823 946 aa4.71□□□□□ -1.66
RIF1-212ENST00000498041 TNNI2P48788 182 aa4.71□□□□□ -1.66
RIF1-212ENST00000498041 ARSHQ5FYA8 562 aa4.71□□□□□ -1.66
RIF1-212ENST00000498041 CDCP2Q5VXM1 449 aa4.71□□□□□ -1.66
RIF1-212ENST00000498041 PLD6Q8N2A8 252 aaKnown RBP4.71□□□□□ -1.66
RIF1-212ENST00000498041 PPP1R13LQ8WUF5 828 aa4.71□□□□□ -1.66
RIF1-212ENST00000498041 MISP3Q96FF7 219 aa4.71□□□□□ -1.66
RIF1-212ENST00000498041 FERD3LQ96RJ6 166 aa4.71□□□□□ -1.66
RIF1-212ENST00000498041 KIF2CQ99661 725 aa4.71□□□□□ -1.66
RIF1-212ENST00000498041 IGSF5Q9NSI5 407 aa4.71□□□□□ -1.66
RIF1-212ENST00000498041 GINM1Q9NU53 330 aa4.71□□□□□ -1.66
RIF1-212ENST00000498041 ZNRF3Q9ULT6 936 aa4.71□□□□□ -1.66
RIF1-212ENST00000498041 PLAGL2Q9UPG8 496 aa4.71□□□□□ -1.66
RIF1-212ENST00000498041 SNX11Q9Y5W9 270 aa4.71□□□□□ -1.66
RIF1-212ENST00000498041 U3KQE9 123 aa4.71□□□□□ -1.66
RIF1-212ENST00000498041 CNTNAP4Q9C0A0 1308 aa4.71□□□□□ -1.66
RIF1-212ENST00000498041 MEIS3P2A8K0S8 358 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 RGS13O14921 159 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 CBX7O95931 251 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 ZNF865P0CJ78 1059 aaPredicted RBP4.7□□□□□ -1.66
RIF1-212ENST00000498041 GBP1P32455 592 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 KIR3DL1P43629 444 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 SOX9P48436 509 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 CHMP4BP1P59074 171 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 PLCL1Q15111 1095 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 NKPD1Q17RQ9 610 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 OVOS1Q6IE37 1185 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 ZNF574Q6ZN55 896 aaPredicted RBP4.7□□□□□ -1.66
RIF1-212ENST00000498041 NFXL1Q6ZNB6 911 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 NLRC3Q7RTR2 1065 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 STK11IPQ8N1F8 1099 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 MFSD4AQ8N468 514 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 POU5F2Q8N7G0 328 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 BAHD1Q8TBE0 780 aaPredicted RBP4.7□□□□□ -1.66
RIF1-212ENST00000498041 TMEM40Q8WWA1 233 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 ATG4CQ96DT6 458 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 TNKS2Q9H2K2 1166 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 CNNM2Q9H8M5 875 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 VAV3Q9UKW4 847 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 EFR3BQ9Y2G0 817 aa4.7□□□□□ -1.66
RIF1-212ENST00000498041 PRR33A8MZF0 331 aa4.69□□□□□ -1.66
RIF1-212ENST00000498041 FAM155AB1AL88 458 aaPredicted RBP4.69□□□□□ -1.66
RIF1-212ENST00000498041 NME1P15531 152 aaKnown RBP4.69□□□□□ -1.66
RIF1-212ENST00000498041 CLCN7P51798 805 aa4.69□□□□□ -1.66
RIF1-212ENST00000498041 PRKCQQ04759 706 aa4.69□□□□□ -1.66
RIF1-212ENST00000498041 GNL2Q13823 731 aaKnown RBP4.69□□□□□ -1.66
RIF1-212ENST00000498041 FBXW10Q5XX13 1052 aa4.69□□□□□ -1.66
RIF1-212ENST00000498041 CBLL1Q75N03 491 aa4.69□□□□□ -1.66
RIF1-212ENST00000498041 SPACA3Q8IXA5 215 aa4.69□□□□□ -1.66
RIF1-212ENST00000498041 SEC16BQ96JE7 1060 aa4.69□□□□□ -1.66
RIF1-212ENST00000498041 HRASLS5Q96KN8 279 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms