RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 RPL6Q02878 288 aaKnown RBP7.54□□□□□ -1.2
SMC4-227ENST00000497984 PPP1R13LQ8WUF5 828 aa7.54□□□□□ -1.2
SMC4-227ENST00000497984 TOX2Q96NM4 488 aa7.54□□□□□ -1.2
SMC4-227ENST00000497984 DIRC2Q96SL1 478 aa7.54□□□□□ -1.2
SMC4-227ENST00000497984 DUSP15Q9H1R2 295 aaPredicted RBP7.54□□□□□ -1.2
SMC4-227ENST00000497984 ADAM30Q9UKF2 790 aa7.54□□□□□ -1.2
SMC4-227ENST00000497984 C1QTNF9P0C862 333 aa7.53□□□□□ -1.2
SMC4-227ENST00000497984 ERVFC1P60507 584 aa7.53□□□□□ -1.2
SMC4-227ENST00000497984 PDE4BQ07343 736 aa7.53□□□□□ -1.2
SMC4-227ENST00000497984 TSNAXIP1Q2TAA8 658 aa7.53□□□□□ -1.2
SMC4-227ENST00000497984 GAB4Q2WGN9 574 aa7.53□□□□□ -1.2
SMC4-227ENST00000497984 LCE5AQ5TCM9 118 aa7.53□□□□□ -1.2
SMC4-227ENST00000497984 LCNL1Q6ZST4 164 aa7.53□□□□□ -1.2
SMC4-227ENST00000497984 FBXO15Q8NCQ5 510 aaPredicted RBP7.53□□□□□ -1.2
SMC4-227ENST00000497984 NSUN3Q9H649 340 aaKnown RBP7.53□□□□□ -1.2
SMC4-227ENST00000497984 TMEM59LQ9UK28 342 aa7.53□□□□□ -1.2
SMC4-227ENST00000497984 TLR6Q9Y2C9 796 aa7.53□□□□□ -1.2
SMC4-227ENST00000497984 SRFP11831 508 aa7.52□□□□□ -1.21
SMC4-227ENST00000497984 LRRC56Q8IYG6 542 aaPredicted RBP7.52□□□□□ -1.21
SMC4-227ENST00000497984 ABHD4Q8TB40 342 aa7.52□□□□□ -1.21
SMC4-227ENST00000497984 TRAIPQ9BWF2 469 aa7.52□□□□□ -1.21
SMC4-227ENST00000497984 KCNK12Q9HB15 430 aa7.52□□□□□ -1.21
SMC4-227ENST00000497984 CEP131Q9UPN4 1083 aa7.52□□□□□ -1.21
SMC4-227ENST00000497984 CORINQ9Y5Q5 1042 aa7.52□□□□□ -1.21
SMC4-227ENST00000497984 HPXP02790 462 aa7.51□□□□□ -1.21
SMC4-227ENST00000497984 RAC2P15153 192 aa7.51□□□□□ -1.21
SMC4-227ENST00000497984 EAPPQ56P03 285 aaPredicted RBP7.51□□□□□ -1.21
SMC4-227ENST00000497984 ANKLE2Q86XL3 938 aa7.51□□□□□ -1.21
SMC4-227ENST00000497984 CREG2Q8IUH2 290 aa7.51□□□□□ -1.21
SMC4-227ENST00000497984 PHC3Q8NDX5 983 aa7.51□□□□□ -1.21
SMC4-227ENST00000497984 ADAMTS10Q9H324 1103 aa7.51□□□□□ -1.21
SMC4-227ENST00000497984 SP110Q9HB58 689 aa7.51□□□□□ -1.21
SMC4-227ENST00000497984 ANKRD33BA6NCL7 494 aa7.5□□□□□ -1.21
SMC4-227ENST00000497984 TPP2P29144 1249 aaPredicted RBP7.5□□□□□ -1.21
SMC4-227ENST00000497984 HK2P52789 917 aa7.5□□□□□ -1.21
SMC4-227ENST00000497984 MYLIPQ8WY64 445 aa7.5□□□□□ -1.21
SMC4-227ENST00000497984 JARID2Q92833 1246 aaPredicted RBP7.5□□□□□ -1.21
SMC4-227ENST00000497984 NOC4LQ9BVI4 516 aaKnown RBP7.5□□□□□ -1.21
SMC4-227ENST00000497984 GPR62Q9BZJ7 368 aa7.5□□□□□ -1.21
SMC4-227ENST00000497984 PARP2Q9UGN5 583 aa7.5□□□□□ -1.21
SMC4-227ENST00000497984 UPK3BL1B0FP48 263 aa7.49□□□□□ -1.21
SMC4-227ENST00000497984 UPK3BL2E5RIL1 263 aa7.49□□□□□ -1.21
SMC4-227ENST00000497984 NFIBO00712 420 aa7.49□□□□□ -1.21
SMC4-227ENST00000497984 CTSHP09668 335 aa7.49□□□□□ -1.21
SMC4-227ENST00000497984 RLBP1P12271 317 aa7.49□□□□□ -1.21
SMC4-227ENST00000497984 DTWD2Q8NBA8 298 aa7.49□□□□□ -1.21
SMC4-227ENST00000497984 ZSCAN18Q8TBC5 510 aaPredicted RBP7.49□□□□□ -1.21
SMC4-227ENST00000497984 CYB5D2Q8WUJ1 264 aa7.49□□□□□ -1.21
SMC4-227ENST00000497984 EPB41L4BQ9H329 900 aa7.49□□□□□ -1.21
SMC4-227ENST00000497984 TRIT1Q9H3H1 467 aaKnown RBP7.49□□□□□ -1.21
SMC4-227ENST00000497984 ST13P50502 369 aaKnown RBP7.48□□□□□ -1.21
SMC4-227ENST00000497984 DAB2P98082 770 aa7.48□□□□□ -1.21
SMC4-227ENST00000497984 TAF1CQ15572 869 aaPredicted RBP7.48□□□□□ -1.21
SMC4-227ENST00000497984 TMEM201Q5SNT2 666 aa7.48□□□□□ -1.21
SMC4-227ENST00000497984 CCDC84Q86UT8 332 aaPredicted RBP7.48□□□□□ -1.21
SMC4-227ENST00000497984 SIAH1Q8IUQ4 282 aa7.48□□□□□ -1.21
SMC4-227ENST00000497984 DCP1AQ9NPI6 582 aaPredicted RBP7.48□□□□□ -1.21
SMC4-227ENST00000497984 USP31Q70CQ4 1352 aa7.47□□□□□ -1.21
SMC4-227ENST00000497984 FAM221AA4D161 298 aa7.47□□□□□ -1.21
SMC4-227ENST00000497984 PATL2C9JE40 543 aaKnown RBP7.47□□□□□ -1.21
SMC4-227ENST00000497984 CILPO75339 1184 aa7.47□□□□□ -1.21
SMC4-227ENST00000497984 MED14OSP0DP75 135 aa7.47□□□□□ -1.21
SMC4-227ENST00000497984 PLCG1P19174 1290 aa7.47□□□□□ -1.21
SMC4-227ENST00000497984 TRHRP34981 398 aaPredicted RBP7.47□□□□□ -1.21
SMC4-227ENST00000497984 BNC2Q6ZN30 1099 aaPredicted RBP7.47□□□□□ -1.21
SMC4-227ENST00000497984 TSPYL5Q86VY4 417 aaPredicted RBP7.47□□□□□ -1.21
SMC4-227ENST00000497984 CD320Q9NPF0 282 aa7.47□□□□□ -1.21
SMC4-227ENST00000497984 DUSP13Q9UII6 198 aa7.47□□□□□ -1.21
SMC4-227ENST00000497984 NPIPB6E9PJ23 425 aa7.46□□□□□ -1.22
SMC4-227ENST00000497984 ZGLP1P0C6A0 271 aa7.46□□□□□ -1.22
SMC4-227ENST00000497984 ZSCAN22P10073 491 aaPredicted RBP7.46□□□□□ -1.22
SMC4-227ENST00000497984 FAM13CQ8NE31 585 aa7.46□□□□□ -1.22
SMC4-227ENST00000497984 RNF32Q9H0A6 362 aa7.46□□□□□ -1.22
SMC4-227ENST00000497984 GPATCH2Q9NW75 528 aa7.46□□□□□ -1.22
SMC4-227ENST00000497984 LRRN2O75325 713 aa7.45□□□□□ -1.22
SMC4-227ENST00000497984 LMNB2Q03252 620 aa7.45□□□□□ -1.22
SMC4-227ENST00000497984 EGR3Q06889 387 aa7.45□□□□□ -1.22
SMC4-227ENST00000497984 PSMD2Q13200 908 aa7.45□□□□□ -1.22
SMC4-227ENST00000497984 SND1Q7KZF4 910 aaKnown RBP eCLIP7.45□□□□□ -1.226e-9■■■■■ 32.8
SMC4-227ENST00000497984 SLFN12Q8IYM2 578 aa7.45□□□□□ -1.22
SMC4-227ENST00000497984 PDZD8Q8NEN9 1154 aa7.45□□□□□ -1.22
SMC4-227ENST00000497984 RNF141Q8WVD5 230 aa7.45□□□□□ -1.22
SMC4-227ENST00000497984 PRR36Q9H6K5 1346 aa7.45□□□□□ -1.22
SMC4-227ENST00000497984 ETV2O00321 342 aaPredicted RBP7.44□□□□□ -1.22
SMC4-227ENST00000497984 F13A1P00488 732 aa7.44□□□□□ -1.22
SMC4-227ENST00000497984 TMEM253P0C7T8 217 aa7.44□□□□□ -1.22
SMC4-227ENST00000497984 GLDCP23378 1020 aa7.44□□□□□ -1.22
SMC4-227ENST00000497984 CAMK2GQ13555 558 aaPredicted RBP7.44□□□□□ -1.22
SMC4-227ENST00000497984 ATG14Q6ZNE5 492 aa7.44□□□□□ -1.22
SMC4-227ENST00000497984 TMC4Q7Z404 712 aa7.44□□□□□ -1.22
SMC4-227ENST00000497984 GATAD2BQ8WXI9 593 aa7.44□□□□□ -1.22
SMC4-227ENST00000497984 RHOVQ96L33 236 aa7.44□□□□□ -1.22
SMC4-227ENST00000497984 C19orf44Q9H6X5 657 aa7.44□□□□□ -1.22
SMC4-227ENST00000497984 KCNH3Q9ULD8 1083 aa7.44□□□□□ -1.22
SMC4-227ENST00000497984 PCDHA11Q9Y5I1 949 aa7.44□□□□□ -1.22
SMC4-227ENST00000497984 F6X3S4 739 aa7.43□□□□□ -1.22
SMC4-227ENST00000497984 PF4P02776 101 aa7.43□□□□□ -1.22
SMC4-227ENST00000497984 YARSP54577 528 aaKnown RBP7.43□□□□□ -1.22
SMC4-227ENST00000497984 KCNA10Q16322 511 aa7.43□□□□□ -1.22
SMC4-227ENST00000497984 TIGD5Q53EQ6 642 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms