RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 USP17L15C9J2P7 530 aa14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 USP17L13C9JLJ4 530 aa14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 USP17L11C9JVI0 530 aa14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 USP17L18D6R9N7 530 aa14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 USP17L22D6RA61 530 aa14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 USP17L17D6RBQ6 530 aa14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 USP17L19D6RCP7 530 aa14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 USP17L20D6RJB6 530 aa14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 H0YGN5 161 aa14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 MAPK4P31152 587 aa14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 PLCD1P51178 756 aa14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 USP17L24Q0WX57 530 aa14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 ZYXQ15942 572 aaKnown RBP14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 UBE2Q1Q7Z7E8 422 aa14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 SOCS4Q8WXH5 440 aa14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 C12orf42Q96LP6 360 aa14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 NUDT12Q9BQG2 462 aa14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 CWC22Q9HCG8 908 aaKnown RBP14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 PAK6Q9NQU5 681 aaPredicted RBP14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 PAG1Q9NWQ8 432 aa14.22□□□□□ -0.13
NUDCD3-211ENST00000497978 NAV1Q8NEY1 1877 aa14.21□□□□□ -0.13
NUDCD3-211ENST00000497978 ATP5JP18859 108 aa14.21□□□□□ -0.13
NUDCD3-211ENST00000497978 SHMT1P34896 483 aa14.21□□□□□ -0.13
NUDCD3-211ENST00000497978 ERVK-9P63128 1117 aa14.21□□□□□ -0.13
NUDCD3-211ENST00000497978 ERVK-24P63145 666 aa14.21□□□□□ -0.13
NUDCD3-211ENST00000497978 PAGR1Q9BTK6 254 aa14.21□□□□□ -0.13
NUDCD3-211ENST00000497978 LRRCC1Q9C099 1032 aa14.21□□□□□ -0.13
NUDCD3-211ENST00000497978 KIAA1683Q9H0B3 1180 aa14.21□□□□□ -0.13
NUDCD3-211ENST00000497978 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.21□□□□□ -0.13
NUDCD3-211ENST00000497978 BOLA2Q9H3K6 86 aa14.21□□□□□ -0.13
NUDCD3-211ENST00000497978 TXNRD2Q9NNW7 524 aa14.21□□□□□ -0.13
NUDCD3-211ENST00000497978 RBPJLQ9UBG7 517 aa14.21□□□□□ -0.13
NUDCD3-211ENST00000497978 NR2E3Q9Y5X4 410 aa14.21□□□□□ -0.13
NUDCD3-211ENST00000497978 MKI67P46013 3256 aaKnown RBP14.21□□□□□ -0.14
NUDCD3-211ENST00000497978 RPTORQ8N122 1335 aa14.2□□□□□ -0.14
NUDCD3-211ENST00000497978 BRCA2P51587 3418 aa14.2□□□□□ -0.14
NUDCD3-211ENST00000497978 TCRBV5S4A2TA0A5A2 114 aa14.2□□□□□ -0.14
NUDCD3-211ENST00000497978 MPHOSPH10O00566 681 aaKnown RBP14.2□□□□□ -0.14
NUDCD3-211ENST00000497978 CYP2B6P20813 491 aa14.2□□□□□ -0.14
NUDCD3-211ENST00000497978 CCNA1P78396 465 aa14.2□□□□□ -0.14
NUDCD3-211ENST00000497978 TRMT44Q8IYL2 757 aaKnown RBP14.2□□□□□ -0.14
NUDCD3-211ENST00000497978 LCORLQ8N3X6 602 aa14.2□□□□□ -0.14
NUDCD3-211ENST00000497978 SDR42E1Q8WUS8 393 aa14.2□□□□□ -0.14
NUDCD3-211ENST00000497978 SPOCK2Q92563 424 aa14.2□□□□□ -0.14
NUDCD3-211ENST00000497978 EDC3Q96F86 508 aaKnown RBP14.2□□□□□ -0.14
NUDCD3-211ENST00000497978 HAUS7Q99871 368 aa14.2□□□□□ -0.14
NUDCD3-211ENST00000497978 HMX1Q9NP08 348 aaPredicted RBP14.2□□□□□ -0.14
NUDCD3-211ENST00000497978 COLQQ9Y215 455 aaPredicted RBP14.2□□□□□ -0.14
NUDCD3-211ENST00000497978 RABGAP1Q9Y3P9 1069 aa14.2□□□□□ -0.14
NUDCD3-211ENST00000497978 GLRX3O76003 335 aaKnown RBP14.19□□□□□ -0.14
NUDCD3-211ENST00000497978 PRR29P0C7W0 189 aa14.19□□□□□ -0.14
NUDCD3-211ENST00000497978 XRCC5P13010 732 aaKnown RBP14.19□□□□□ -0.14
NUDCD3-211ENST00000497978 ADD2P35612 726 aa14.19□□□□□ -0.14
NUDCD3-211ENST00000497978 GABPAQ06546 454 aa14.19□□□□□ -0.14
NUDCD3-211ENST00000497978 Q3C1V9 767 aa14.19□□□□□ -0.14
NUDCD3-211ENST00000497978 CATSPERGQ6ZRH7 1159 aa14.19□□□□□ -0.14
NUDCD3-211ENST00000497978 PLEKHH3Q7Z736 793 aa14.19□□□□□ -0.14
NUDCD3-211ENST00000497978 AMOTL1Q8IY63 956 aa14.19□□□□□ -0.14
NUDCD3-211ENST00000497978 ACER1Q8TDN7 264 aa14.19□□□□□ -0.14
NUDCD3-211ENST00000497978 DDRGK1Q96HY6 314 aa14.19□□□□□ -0.14
NUDCD3-211ENST00000497978 CRISPLD2Q9H0B8 497 aa14.19□□□□□ -0.14
NUDCD3-211ENST00000497978 ARMT1Q9H993 441 aa14.19□□□□□ -0.14
NUDCD3-211ENST00000497978 DCP1AQ9NPI6 582 aaPredicted RBP14.19□□□□□ -0.14
NUDCD3-211ENST00000497978 SWAP70Q9UH65 585 aa14.19□□□□□ -0.14
NUDCD3-211ENST00000497978 DDX60LQ5H9U9 1706 aaKnown RBP14.18□□□□□ -0.14
NUDCD3-211ENST00000497978 PITPNM1O00562 1244 aa14.18□□□□□ -0.14
NUDCD3-211ENST00000497978 PEX10O60683 326 aa14.18□□□□□ -0.14
NUDCD3-211ENST00000497978 MBD4O95243 580 aa14.18□□□□□ -0.14
NUDCD3-211ENST00000497978 VCAM1P19320 739 aa14.18□□□□□ -0.14
NUDCD3-211ENST00000497978 RGS2P41220 211 aa14.18□□□□□ -0.14
NUDCD3-211ENST00000497978 SEPT2Q15019 361 aa14.18□□□□□ -0.14
NUDCD3-211ENST00000497978 C20orf194Q5TEA3 1177 aa14.18□□□□□ -0.14
NUDCD3-211ENST00000497978 ZSCAN25Q6NSZ9 544 aa14.18□□□□□ -0.14
NUDCD3-211ENST00000497978 GPR142Q7Z601 462 aa14.18□□□□□ -0.14
NUDCD3-211ENST00000497978 ANKLE1Q8NAG6 615 aa14.18□□□□□ -0.14
NUDCD3-211ENST00000497978 TRIB2Q92519 343 aa14.18□□□□□ -0.14
NUDCD3-211ENST00000497978 ATP8A2Q9NTI2 1148 aa14.18□□□□□ -0.14
NUDCD3-211ENST00000497978 EVI5O60447 810 aa14.17□□□□□ -0.14
NUDCD3-211ENST00000497978 ZKSCAN1P17029 563 aaPredicted RBP14.17□□□□□ -0.14
NUDCD3-211ENST00000497978 GUCY1A2P33402 732 aa14.17□□□□□ -0.14
NUDCD3-211ENST00000497978 UBE3CQ15386 1083 aa14.17□□□□□ -0.14
NUDCD3-211ENST00000497978 TMEM179Q6ZVK1 233 aa14.17□□□□□ -0.14
NUDCD3-211ENST00000497978 NECAB2Q7Z6G3 386 aa14.17□□□□□ -0.14
NUDCD3-211ENST00000497978 PORCNQ9H237 461 aa14.17□□□□□ -0.14
NUDCD3-211ENST00000497978 RPAP3Q9H6T3 665 aaPredicted RBP14.17□□□□□ -0.14
NUDCD3-211ENST00000497978 PLXNB2O15031 1838 aa14.17□□□□□ -0.14
NUDCD3-211ENST00000497978 CYP2D6P10635 497 aa14.16□□□□□ -0.14
NUDCD3-211ENST00000497978 PRKAR2AP13861 404 aaKnown RBP14.16□□□□□ -0.14
NUDCD3-211ENST00000497978 TRIM32Q13049 653 aa14.16□□□□□ -0.14
NUDCD3-211ENST00000497978 MORN1Q5T089 497 aa14.16□□□□□ -0.14
NUDCD3-211ENST00000497978 WDR78Q5VTH9 848 aa14.16□□□□□ -0.14
NUDCD3-211ENST00000497978 CHRDL2Q6WN34 429 aa14.16□□□□□ -0.14
NUDCD3-211ENST00000497978 LBX2Q6XYB7 198 aa14.16□□□□□ -0.14
NUDCD3-211ENST00000497978 GPATCH3Q96I76 525 aa14.16□□□□□ -0.14
NUDCD3-211ENST00000497978 PAWRQ96IZ0 340 aaKnown RBP14.16□□□□□ -0.14
NUDCD3-211ENST00000497978 APBA2Q99767 749 aa14.16□□□□□ -0.14
NUDCD3-211ENST00000497978 ZBTB47Q9UFB7 747 aaPredicted RBP14.16□□□□□ -0.14
NUDCD3-211ENST00000497978 PRKAB2O43741 272 aa14.15□□□□□ -0.14
NUDCD3-211ENST00000497978 SMARCA5O60264 1052 aaPredicted RBP14.15□□□□□ -0.14
NUDCD3-211ENST00000497978 CNMDO75829 334 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms