RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 KIAA1683Q9H0B3 1180 aa18.38■□□□□ 0.53
NUP50-219ENST00000497960 CYP2D7A0A087X1C5 515 aa18.37■□□□□ 0.53
NUP50-219ENST00000497960 GPAA1O43292 621 aa18.37■□□□□ 0.53
NUP50-219ENST00000497960 GNAT2P19087 354 aa18.37■□□□□ 0.53
NUP50-219ENST00000497960 GUCY1A2P33402 732 aa18.37■□□□□ 0.53
NUP50-219ENST00000497960 SEPT2Q15019 361 aa18.37■□□□□ 0.53
NUP50-219ENST00000497960 GIMAP6Q6P9H5 292 aa18.37■□□□□ 0.53
NUP50-219ENST00000497960 CTR9Q6PD62 1173 aa18.37■□□□□ 0.53
NUP50-219ENST00000497960 TMEM179Q6ZVK1 233 aa18.37■□□□□ 0.53
NUP50-219ENST00000497960 ACER1Q8TDN7 264 aa18.37■□□□□ 0.53
NUP50-219ENST00000497960 COA7Q96BR5 231 aa18.37■□□□□ 0.53
NUP50-219ENST00000497960 C12orf42Q96LP6 360 aa18.37■□□□□ 0.53
NUP50-219ENST00000497960 CCDC17Q96LX7 622 aa18.37■□□□□ 0.53
NUP50-219ENST00000497960 P2RX7Q99572 595 aaKnown RBP18.37■□□□□ 0.53
NUP50-219ENST00000497960 ARPP21Q9UBL0 812 aaPredicted RBP18.37■□□□□ 0.53
NUP50-219ENST00000497960 ZSWIM8A7E2V4 1837 aa18.36■□□□□ 0.53
NUP50-219ENST00000497960 CDK8P49336 464 aa18.36■□□□□ 0.53
NUP50-219ENST00000497960 PRKCZQ05513 592 aa18.36■□□□□ 0.53
NUP50-219ENST00000497960 SH3TC2Q8TF17 1288 aa18.36■□□□□ 0.53
NUP50-219ENST00000497960 GTF3C2Q8WUA4 911 aaPredicted RBP18.36■□□□□ 0.53
NUP50-219ENST00000497960 SALL3Q9BXA9 1300 aa18.36■□□□□ 0.53
NUP50-219ENST00000497960 STAP2Q9UGK3 403 aa18.36■□□□□ 0.53
NUP50-219ENST00000497960 BAZ2AQ9UIF9 1905 aaKnown RBP18.35■□□□□ 0.53
NUP50-219ENST00000497960 GSG1L2A8MUP6 293 aa18.35■□□□□ 0.53
NUP50-219ENST00000497960 USP17L15C9J2P7 530 aa18.35■□□□□ 0.53
NUP50-219ENST00000497960 USP17L13C9JLJ4 530 aa18.35■□□□□ 0.53
NUP50-219ENST00000497960 USP17L11C9JVI0 530 aa18.35■□□□□ 0.53
NUP50-219ENST00000497960 USP17L18D6R9N7 530 aa18.35■□□□□ 0.53
NUP50-219ENST00000497960 USP17L22D6RA61 530 aa18.35■□□□□ 0.53
NUP50-219ENST00000497960 USP17L17D6RBQ6 530 aa18.35■□□□□ 0.53
NUP50-219ENST00000497960 USP17L19D6RCP7 530 aa18.35■□□□□ 0.53
NUP50-219ENST00000497960 USP17L20D6RJB6 530 aa18.35■□□□□ 0.53
NUP50-219ENST00000497960 APPP05067 770 aa18.35■□□□□ 0.53
NUP50-219ENST00000497960 GRK4P32298 578 aa18.35■□□□□ 0.53
NUP50-219ENST00000497960 PDE1AP54750 535 aa18.35■□□□□ 0.53
NUP50-219ENST00000497960 HERVK_113P62684 666 aa18.35■□□□□ 0.53
NUP50-219ENST00000497960 USP17L24Q0WX57 530 aa18.35■□□□□ 0.53
NUP50-219ENST00000497960 C16orf86Q6ZW13 317 aa18.35■□□□□ 0.53
NUP50-219ENST00000497960 LNPKQ9C0E8 428 aa18.35■□□□□ 0.53
NUP50-219ENST00000497960 M0R2C6 588 aa18.34■□□□□ 0.53
NUP50-219ENST00000497960 AKR1B1P15121 316 aa18.34■□□□□ 0.53
NUP50-219ENST00000497960 TDO2P48775 406 aa18.34■□□□□ 0.53
NUP50-219ENST00000497960 SBK1Q52WX2 424 aa18.34■□□□□ 0.53
NUP50-219ENST00000497960 CENPQQ7L2Z9 268 aaPredicted RBP18.34■□□□□ 0.53
NUP50-219ENST00000497960 GPRC5AQ8NFJ5 357 aa18.34■□□□□ 0.53
NUP50-219ENST00000497960 EVI5LQ96CN4 794 aa18.34■□□□□ 0.53
NUP50-219ENST00000497960 MORF4L1Q9UBU8 362 aa18.34■□□□□ 0.53
NUP50-219ENST00000497960 BIN2Q9UBW5 565 aaPredicted RBP18.34■□□□□ 0.53
NUP50-219ENST00000497960 POTEFA5A3E0 1075 aa18.33■□□□□ 0.52
NUP50-219ENST00000497960 MINDY4BA8MYZ0 360 aa18.33■□□□□ 0.52
NUP50-219ENST00000497960 MYCP01106 439 aaPredicted RBP18.33■□□□□ 0.52
NUP50-219ENST00000497960 VCAM1P19320 739 aa18.33■□□□□ 0.52
NUP50-219ENST00000497960 FLT3LGP49771 235 aa18.33■□□□□ 0.52
NUP50-219ENST00000497960 ICA1Q05084 483 aa18.33■□□□□ 0.52
NUP50-219ENST00000497960 SLAIN1Q8ND83 568 aa18.33■□□□□ 0.52
NUP50-219ENST00000497960 NACAP1Q9BZK3 213 aa18.33■□□□□ 0.52
NUP50-219ENST00000497960 SH2D4AQ9H788 454 aa18.33■□□□□ 0.52
NUP50-219ENST00000497960 ARHGEF10LQ9HCE6 1279 aa18.33■□□□□ 0.52
NUP50-219ENST00000497960 PPP4R2Q9NY27 417 aa18.33■□□□□ 0.52
NUP50-219ENST00000497960 GABRQQ9UN88 632 aa18.33■□□□□ 0.52
NUP50-219ENST00000497960 PDE4DIPQ5VU43 2346 aa18.32■□□□□ 0.52
NUP50-219ENST00000497960 PATL2C9JE40 543 aaKnown RBP18.32■□□□□ 0.52
NUP50-219ENST00000497960 SMIM22K7EJ46 135 aa18.32■□□□□ 0.52
NUP50-219ENST00000497960 UBXN2AP68543 259 aa18.32■□□□□ 0.52
NUP50-219ENST00000497960 NUCB1Q02818 461 aa18.32■□□□□ 0.52
NUP50-219ENST00000497960 ZMYM1Q5SVZ6 1142 aa18.32■□□□□ 0.52
NUP50-219ENST00000497960 CATSPERGQ6ZRH7 1159 aa18.32■□□□□ 0.52
NUP50-219ENST00000497960 CHD1LQ86WJ1 897 aa18.32■□□□□ 0.52
NUP50-219ENST00000497960 CCAR1Q8IX12 1150 aaKnown RBP18.32■□□□□ 0.52
NUP50-219ENST00000497960 MKNK2Q9HBH9 465 aa18.32■□□□□ 0.52
NUP50-219ENST00000497960 HTTP42858 3142 aa18.32■□□□□ 0.52
NUP50-219ENST00000497960 MGAMO43451 1857 aa18.31■□□□□ 0.52
NUP50-219ENST00000497960 A0A1W2PRG0 241 aa18.31■□□□□ 0.52
NUP50-219ENST00000497960 ADCY3O60266 1144 aa18.31■□□□□ 0.52
NUP50-219ENST00000497960 IRF5Q13568 498 aa18.31■□□□□ 0.52
NUP50-219ENST00000497960 SEC62Q99442 399 aaKnown RBP18.31■□□□□ 0.52
NUP50-219ENST00000497960 PAGR1Q9BTK6 254 aa18.31■□□□□ 0.52
NUP50-219ENST00000497960 RPAP3Q9H6T3 665 aaPredicted RBP18.31■□□□□ 0.52
NUP50-219ENST00000497960 KANSL2Q9H9L4 492 aa18.31■□□□□ 0.52
NUP50-219ENST00000497960 ZNF287Q9HBT7 754 aa18.31■□□□□ 0.52
NUP50-219ENST00000497960 TXNRD2Q9NNW7 524 aa18.31■□□□□ 0.52
NUP50-219ENST00000497960 RBPJLQ9UBG7 517 aa18.31■□□□□ 0.52
NUP50-219ENST00000497960 ERVK-9P63128 1117 aa18.3■□□□□ 0.52
NUP50-219ENST00000497960 ERVK-24P63145 666 aa18.3■□□□□ 0.52
NUP50-219ENST00000497960 IFNL3Q8IZI9 196 aa18.3■□□□□ 0.52
NUP50-219ENST00000497960 STK11IPQ8N1F8 1099 aa18.3■□□□□ 0.52
NUP50-219ENST00000497960 PXYLP1Q8TE99 480 aa18.3■□□□□ 0.52
NUP50-219ENST00000497960 EPB41L4AQ9HCS5 686 aaPredicted RBP18.3■□□□□ 0.52
NUP50-219ENST00000497960 RABGAP1Q9Y3P9 1069 aa18.3■□□□□ 0.52
NUP50-219ENST00000497960 DOCK3Q8IZD9 2030 aa18.3■□□□□ 0.52
NUP50-219ENST00000497960 MYH8P13535 1937 aa18.29■□□□□ 0.52
NUP50-219ENST00000497960 EN2P19622 333 aaPredicted RBP18.29■□□□□ 0.52
NUP50-219ENST00000497960 MAPK4P31152 587 aa18.29■□□□□ 0.52
NUP50-219ENST00000497960 CCNA1P78396 465 aa18.29■□□□□ 0.52
NUP50-219ENST00000497960 ATP2B2Q01814 1243 aa18.29■□□□□ 0.52
NUP50-219ENST00000497960 CLEC10AQ8IUN9 316 aa18.29■□□□□ 0.52
NUP50-219ENST00000497960 LPAR1Q92633 364 aa18.29■□□□□ 0.52
NUP50-219ENST00000497960 NAPBQ9H115 298 aa18.29■□□□□ 0.52
NUP50-219ENST00000497960 TMX2Q9Y320 296 aa18.29■□□□□ 0.52
NUP50-219ENST00000497960 TRIM6-TRIM34B2RNG4 842 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms