RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 USP17L11C9JVI0 530 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 USP17L21D6R901 530 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 USP17L18D6R9N7 530 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 USP17L22D6RA61 530 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 USP17L17D6RBQ6 530 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 USP17L19D6RCP7 530 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 USP17L20D6RJB6 530 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 TRAF5O00463 557 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 EPS15P42566 896 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 USP17L24Q0WX57 530 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 MTHFSDQ2M296 383 aaKnown RBP10.22□□□□□ -0.77
VPS45-210ENST00000497638 TPTE2Q6XPS3 522 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 ANKMY2Q8IV38 441 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 Q8N3U1 123 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 NUDT8Q8WV74 236 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 FMNL2Q96PY5 1086 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 EFCC1Q9HA90 598 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 JPH1Q9HDC5 661 aaPredicted RBP10.22□□□□□ -0.77
VPS45-210ENST00000497638 SLC6A14Q9UN76 642 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.22□□□□□ -0.77
VPS45-210ENST00000497638 CELF2O95319 508 aaKnown RBP10.21□□□□□ -0.77
VPS45-210ENST00000497638 A1BGP04217 495 aa10.21□□□□□ -0.77
VPS45-210ENST00000497638 IGFBP4P22692 258 aa10.21□□□□□ -0.77
VPS45-210ENST00000497638 TEFQ10587 303 aa10.21□□□□□ -0.77
VPS45-210ENST00000497638 NOGQ13253 232 aa10.21□□□□□ -0.77
VPS45-210ENST00000497638 IER5Q5VY09 327 aa10.21□□□□□ -0.77
VPS45-210ENST00000497638 POLR3GLQ9BT43 218 aa10.21□□□□□ -0.77
VPS45-210ENST00000497638 GSX2Q9BZM3 304 aa10.21□□□□□ -0.77
VPS45-210ENST00000497638 COL4A5P29400 1685 aa10.21□□□□□ -0.78
VPS45-210ENST00000497638 FAM196BA6NMK8 535 aa10.2□□□□□ -0.78
VPS45-210ENST00000497638 TGFBR3LH3BV60 316 aa10.2□□□□□ -0.78
VPS45-210ENST00000497638 SIPA1L3O60292 1781 aaPredicted RBP10.2□□□□□ -0.78
VPS45-210ENST00000497638 HMOX1P09601 288 aa10.2□□□□□ -0.78
VPS45-210ENST00000497638 EPB42P16452 691 aa10.2□□□□□ -0.78
VPS45-210ENST00000497638 CCINQ13939 588 aa10.2□□□□□ -0.78
VPS45-210ENST00000497638 CIAPIN1Q6FI81 312 aa10.2□□□□□ -0.78
VPS45-210ENST00000497638 PANK3Q9H999 370 aa10.2□□□□□ -0.78
VPS45-210ENST00000497638 ADARB2Q9NS39 739 aaKnown RBP10.2□□□□□ -0.78
VPS45-210ENST00000497638 A6NJR5 290 aa10.19□□□□□ -0.78
VPS45-210ENST00000497638 NFKB1P19838 968 aa10.19□□□□□ -0.78
VPS45-210ENST00000497638 SOX10P56693 466 aa10.19□□□□□ -0.78
VPS45-210ENST00000497638 CRY2Q49AN0 593 aa10.19□□□□□ -0.78
VPS45-210ENST00000497638 TPSG1Q9NRR2 321 aa10.19□□□□□ -0.78
VPS45-210ENST00000497638 DNAJB12Q9NXW2 375 aaKnown RBP10.19□□□□□ -0.78
VPS45-210ENST00000497638 NIP7Q9Y221 180 aaKnown RBP eCLIP10.19□□□□□ -0.78
VPS45-210ENST00000497638 CDHR2Q9BYE9 1310 aa10.18□□□□□ -0.78
VPS45-210ENST00000497638 NIM1KQ8IY84 436 aa10.18□□□□□ -0.78
VPS45-210ENST00000497638 VTI1AQ96AJ9 217 aa10.18□□□□□ -0.78
VPS45-210ENST00000497638 SAGE1Q9NXZ1 904 aa10.18□□□□□ -0.78
VPS45-210ENST00000497638 GPRC5DQ9NZD1 345 aa10.18□□□□□ -0.78
VPS45-210ENST00000497638 KLK14Q9P0G3 267 aa10.18□□□□□ -0.78
VPS45-210ENST00000497638 RIC1Q4ADV7 1423 aa10.17□□□□□ -0.78
VPS45-210ENST00000497638 GNAT3A8MTJ3 354 aa10.17□□□□□ -0.78
VPS45-210ENST00000497638 RSPO4Q2I0M5 234 aaPredicted RBP10.17□□□□□ -0.78
VPS45-210ENST00000497638 PSAPL1Q6NUJ1 521 aa10.17□□□□□ -0.78
VPS45-210ENST00000497638 GLIS2Q9BZE0 524 aaPredicted RBP10.17□□□□□ -0.78
VPS45-210ENST00000497638 PGAP2Q9UHJ9 254 aa10.17□□□□□ -0.78
VPS45-210ENST00000497638 KIF7Q2M1P5 1343 aa10.16□□□□□ -0.78
VPS45-210ENST00000497638 A0A0A0MRY4 1105 aa10.16□□□□□ -0.78
VPS45-210ENST00000497638 C9orf172C9J069 976 aa10.16□□□□□ -0.78
VPS45-210ENST00000497638 RGS9O75916 674 aaPredicted RBP10.16□□□□□ -0.78
VPS45-210ENST00000497638 ITGB7P26010 798 aa10.16□□□□□ -0.78
VPS45-210ENST00000497638 IDH3AP50213 366 aa10.16□□□□□ -0.78
VPS45-210ENST00000497638 RAC1P63000 192 aa10.16□□□□□ -0.78
VPS45-210ENST00000497638 IL17REQ8NFR9 667 aa10.16□□□□□ -0.78
VPS45-210ENST00000497638 RPGRQ92834 1020 aaKnown RBP10.16□□□□□ -0.78
VPS45-210ENST00000497638 GCC1Q96CN9 775 aa10.16□□□□□ -0.78
VPS45-210ENST00000497638 NYXQ9GZU5 481 aa10.16□□□□□ -0.78
VPS45-210ENST00000497638 VPS33BQ9H267 617 aa10.16□□□□□ -0.78
VPS45-210ENST00000497638 DMGDHQ9UI17 866 aaKnown RBP10.16□□□□□ -0.78
VPS45-210ENST00000497638 KNSTRNQ9Y448 316 aa10.16□□□□□ -0.78
VPS45-210ENST00000497638 CEMIPQ8WUJ3 1361 aa10.15□□□□□ -0.78
VPS45-210ENST00000497638 ABCC12Q96J65 1359 aa10.15□□□□□ -0.78
VPS45-210ENST00000497638 NPC1L1Q9UHC9 1359 aa10.15□□□□□ -0.78
VPS45-210ENST00000497638 PPIP5K2O43314 1243 aa10.15□□□□□ -0.78
VPS45-210ENST00000497638 DIAPH1O60610 1272 aaKnown RBP10.15□□□□□ -0.78
VPS45-210ENST00000497638 HOXA10P31260 410 aaPredicted RBP10.15□□□□□ -0.78
VPS45-210ENST00000497638 HUNKP57058 714 aa10.15□□□□□ -0.78
VPS45-210ENST00000497638 ZMYM1Q5SVZ6 1142 aa10.15□□□□□ -0.78
VPS45-210ENST00000497638 CDC37L1Q7L3B6 337 aa10.15□□□□□ -0.78
VPS45-210ENST00000497638 KRT25Q7Z3Z0 450 aa10.15□□□□□ -0.78
VPS45-210ENST00000497638 ZNF408Q9H9D4 720 aa10.15□□□□□ -0.78
VPS45-210ENST00000497638 IBTKQ9P2D0 1353 aaPredicted RBP10.14□□□□□ -0.79
VPS45-210ENST00000497638 FAM177BA6PVY3 158 aa10.14□□□□□ -0.79
VPS45-210ENST00000497638 BTBD11A6QL63 1104 aa10.14□□□□□ -0.79
VPS45-210ENST00000497638 SNRPA1P09661 255 aaKnown RBP10.14□□□□□ -0.79
VPS45-210ENST00000497638 ELNP15502 786 aa10.14□□□□□ -0.79
VPS45-210ENST00000497638 PIP4K2AP48426 406 aaPredicted RBP10.14□□□□□ -0.79
VPS45-210ENST00000497638 GMPSP49915 693 aaPredicted RBP10.14□□□□□ -0.79
VPS45-210ENST00000497638 AFF1P51825 1210 aaKnown RBP10.14□□□□□ -0.79
VPS45-210ENST00000497638 PCSK7Q16549 785 aa10.14□□□□□ -0.79
VPS45-210ENST00000497638 NKAPLQ5M9Q1 402 aa10.14□□□□□ -0.79
VPS45-210ENST00000497638 CTU1Q7Z7A3 348 aaKnown RBP10.14□□□□□ -0.79
VPS45-210ENST00000497638 FAM35AQ86V20 835 aa10.14□□□□□ -0.79
VPS45-210ENST00000497638 USP16Q9Y5T5 823 aa10.14□□□□□ -0.79
VPS45-210ENST00000497638 AKAP11Q9UKA4 1901 aa10.13□□□□□ -0.79
VPS45-210ENST00000497638 INPP5BP32019 993 aa10.13□□□□□ -0.79
VPS45-210ENST00000497638 ARSDP51689 593 aa10.13□□□□□ -0.79
VPS45-210ENST00000497638 CXCL9Q07325 125 aa10.13□□□□□ -0.79
VPS45-210ENST00000497638 RGMBQ6NW40 437 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms