RNA–Protein interactions for RNA: ENST00000497464.5

TPRKB-210, Transcript of TP53RK binding protein, human

TSL 2

Gene TPRKB, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRKB-210	ENST00000497464	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.99	□□□□□ -0.17
TPRKB-210	ENST00000497464	NEUROD6	Q96NK8	337 aa		13.99	□□□□□ -0.17
TPRKB-210	ENST00000497464	TTC28	Q96AY4	2481 aa		13.98	□□□□□ -0.17
TPRKB-210	ENST00000497464	CDK5RAP2	Q96SN8	1893 aa		13.98	□□□□□ -0.17
TPRKB-210	ENST00000497464	ANP32C	O43423	234 aa		13.98	□□□□□ -0.17
TPRKB-210	ENST00000497464	GLRX3	O76003	335 aa	Known RBP	13.98	□□□□□ -0.17
TPRKB-210	ENST00000497464	GDF11	O95390	407 aa		13.98	□□□□□ -0.17
TPRKB-210	ENST00000497464	CNGA1	P29973	690 aa		13.98	□□□□□ -0.17
TPRKB-210	ENST00000497464	JAG1	P78504	1218 aa		13.98	□□□□□ -0.17
TPRKB-210	ENST00000497464	WDR78	Q5VTH9	848 aa		13.98	□□□□□ -0.17
TPRKB-210	ENST00000497464	FAM212A	Q96EL1	285 aa		13.98	□□□□□ -0.17
TPRKB-210	ENST00000497464	EDC3	Q96F86	508 aa	Known RBP	13.98	□□□□□ -0.17
TPRKB-210	ENST00000497464	PRDM6	Q9NQX0	595 aa		13.98	□□□□□ -0.17
TPRKB-210	ENST00000497464	SMC4	Q9NTJ3	1288 aa		13.98	□□□□□ -0.17
TPRKB-210	ENST00000497464	GINM1	Q9NU53	330 aa		13.98	□□□□□ -0.17
TPRKB-210	ENST00000497464	DDX20	Q9UHI6	824 aa	Known RBP	13.98	□□□□□ -0.17
TPRKB-210	ENST00000497464	ZBTB21	Q9ULJ3	1066 aa		13.98	□□□□□ -0.17
TPRKB-210	ENST00000497464	FOCAD	Q5VW36	1801 aa		13.97	□□□□□ -0.17
TPRKB-210	ENST00000497464	DNM1L	O00429	736 aa		13.97	□□□□□ -0.17
TPRKB-210	ENST00000497464	MSC	O60682	206 aa		13.97	□□□□□ -0.17
TPRKB-210	ENST00000497464	PLCG2	P16885	1265 aa		13.97	□□□□□ -0.17
TPRKB-210	ENST00000497464	RTP1	P59025	263 aa		13.97	□□□□□ -0.17
TPRKB-210	ENST00000497464	CCNA1	P78396	465 aa		13.97	□□□□□ -0.17
TPRKB-210	ENST00000497464	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.97	□□□□□ -0.17
TPRKB-210	ENST00000497464	ALDH1L2	Q3SY69	923 aa		13.97	□□□□□ -0.17
TPRKB-210	ENST00000497464	LPAR1	Q92633	364 aa		13.97	□□□□□ -0.17
TPRKB-210	ENST00000497464	SEMA6B	Q9H3T3	888 aa		13.97	□□□□□ -0.17
TPRKB-210	ENST00000497464	DNAJC18	Q9H819	358 aa		13.97	□□□□□ -0.17
TPRKB-210	ENST00000497464	EMILIN3	Q9NT22	766 aa		13.97	□□□□□ -0.17
TPRKB-210	ENST00000497464	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
TPRKB-210	ENST00000497464	FLRT1	Q9NZU1	646 aa		13.97	□□□□□ -0.17
TPRKB-210	ENST00000497464	LRP2BP	Q9P2M1	347 aa		13.97	□□□□□ -0.17
TPRKB-210	ENST00000497464	NDUFB9	Q9Y6M9	179 aa		13.97	□□□□□ -0.17
TPRKB-210	ENST00000497464	RLF	Q13129	1914 aa		13.96	□□□□□ -0.17
TPRKB-210	ENST00000497464		E9PSI1	815 aa		13.96	□□□□□ -0.17
TPRKB-210	ENST00000497464	BAG3	O95817	575 aa		13.96	□□□□□ -0.17
TPRKB-210	ENST00000497464	ATP2B2	Q01814	1243 aa		13.96	□□□□□ -0.17
TPRKB-210	ENST00000497464	SHH	Q15465	462 aa		13.96	□□□□□ -0.17
TPRKB-210	ENST00000497464	USP17L2	Q6R6M4	530 aa		13.96	□□□□□ -0.17
TPRKB-210	ENST00000497464	POTEE	Q6S8J3	1075 aa		13.96	□□□□□ -0.17
TPRKB-210	ENST00000497464	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.96	□□□□□ -0.17
TPRKB-210	ENST00000497464	MAPKAPK5	Q8IW41	473 aa		13.96	□□□□□ -0.17
TPRKB-210	ENST00000497464	TGFBRAP1	Q8WUH2	860 aa		13.96	□□□□□ -0.17
TPRKB-210	ENST00000497464	ATP11B	Q9Y2G3	1177 aa		13.96	□□□□□ -0.17
TPRKB-210	ENST00000497464	RABGAP1	Q9Y3P9	1069 aa		13.96	□□□□□ -0.17
TPRKB-210	ENST00000497464	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.96	□□□□□ -0.18
TPRKB-210	ENST00000497464	PRUNE2	Q8WUY3	3088 aa		13.96	□□□□□ -0.18
TPRKB-210	ENST00000497464	CDH23	Q9H251	3354 aa		13.96	□□□□□ -0.18
TPRKB-210	ENST00000497464	FLT1	P17948	1338 aa		13.95	□□□□□ -0.18
TPRKB-210	ENST00000497464	SLC15A5	A6NIM6	579 aa		13.95	□□□□□ -0.18
TPRKB-210	ENST00000497464	SRGAP3	O43295	1099 aa		13.95	□□□□□ -0.18
TPRKB-210	ENST00000497464	ARID4A	P29374	1257 aa	Predicted RBP	13.95	□□□□□ -0.18
TPRKB-210	ENST00000497464	NAA16	Q6N069	864 aa	Predicted RBP	13.95	□□□□□ -0.18
TPRKB-210	ENST00000497464	METTL16	Q86W50	562 aa	Known RBP	13.95	□□□□□ -0.18
TPRKB-210	ENST00000497464	MYLIP	Q8WY64	445 aa		13.95	□□□□□ -0.18
TPRKB-210	ENST00000497464	MEIS3	Q99687	375 aa		13.95	□□□□□ -0.18
TPRKB-210	ENST00000497464	FEZ1	Q99689	392 aa		13.95	□□□□□ -0.18
TPRKB-210	ENST00000497464	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.95	□□□□□ -0.18
TPRKB-210	ENST00000497464	PALD1	Q9ULE6	856 aa		13.95	□□□□□ -0.18
TPRKB-210	ENST00000497464	IVNS1ABP	Q9Y6Y0	642 aa		13.95	□□□□□ -0.18
TPRKB-210	ENST00000497464	USP17L15	C9J2P7	530 aa		13.94	□□□□□ -0.18
TPRKB-210	ENST00000497464	USP17L13	C9JLJ4	530 aa		13.94	□□□□□ -0.18
TPRKB-210	ENST00000497464	USP17L11	C9JVI0	530 aa		13.94	□□□□□ -0.18
TPRKB-210	ENST00000497464	USP17L18	D6R9N7	530 aa		13.94	□□□□□ -0.18
TPRKB-210	ENST00000497464	USP17L22	D6RA61	530 aa		13.94	□□□□□ -0.18
TPRKB-210	ENST00000497464	USP17L17	D6RBQ6	530 aa		13.94	□□□□□ -0.18
TPRKB-210	ENST00000497464	USP17L19	D6RCP7	530 aa		13.94	□□□□□ -0.18
TPRKB-210	ENST00000497464	USP17L20	D6RJB6	530 aa		13.94	□□□□□ -0.18
TPRKB-210	ENST00000497464	CNMD	O75829	334 aa		13.94	□□□□□ -0.18
TPRKB-210	ENST00000497464	PTPRE	P23469	700 aa		13.94	□□□□□ -0.18
TPRKB-210	ENST00000497464	CYP2C19	P33261	490 aa		13.94	□□□□□ -0.18
TPRKB-210	ENST00000497464	MCAM	P43121	646 aa		13.94	□□□□□ -0.18
TPRKB-210	ENST00000497464	USP17L24	Q0WX57	530 aa		13.94	□□□□□ -0.18
TPRKB-210	ENST00000497464	ZYX	Q15942	572 aa	Known RBP	13.94	□□□□□ -0.18
TPRKB-210	ENST00000497464	C9orf50	Q5SZB4	431 aa		13.94	□□□□□ -0.18
TPRKB-210	ENST00000497464	GJC2	Q5T442	439 aa	Predicted RBP	13.94	□□□□□ -0.18
TPRKB-210	ENST00000497464	SYMPK	Q92797	1274 aa	Known RBP	13.94	□□□□□ -0.18
TPRKB-210	ENST00000497464	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.94	□□□□□ -0.18
TPRKB-210	ENST00000497464	KBTBD13	C9JR72	458 aa		13.93	□□□□□ -0.18
TPRKB-210	ENST00000497464	GH2	P01242	217 aa		13.93	□□□□□ -0.18
TPRKB-210	ENST00000497464	HLA-DOA	P06340	250 aa		13.93	□□□□□ -0.18
TPRKB-210	ENST00000497464	HOXC6	P09630	235 aa		13.93	□□□□□ -0.18
TPRKB-210	ENST00000497464	UQCRFS1P1	P0C7P4	283 aa		13.93	□□□□□ -0.18
TPRKB-210	ENST00000497464	FOSL2	P15408	326 aa		13.93	□□□□□ -0.18
TPRKB-210	ENST00000497464	NUBP1	P53384	320 aa		13.93	□□□□□ -0.18
TPRKB-210	ENST00000497464	SMAD3	P84022	425 aa	Known RBP	13.93	□□□□□ -0.18
TPRKB-210	ENST00000497464	ATF7IP	Q6VMQ6	1270 aa		13.93	□□□□□ -0.18
TPRKB-210	ENST00000497464	ARRDC4	Q8NCT1	418 aa		13.93	□□□□□ -0.18
TPRKB-210	ENST00000497464	BAD	Q92934	168 aa		13.93	□□□□□ -0.18
TPRKB-210	ENST00000497464	C12orf42	Q96LP6	360 aa		13.93	□□□□□ -0.18
TPRKB-210	ENST00000497464	API5	Q9BZZ5	524 aa	Known RBP	13.93	□□□□□ -0.18
TPRKB-210	ENST00000497464	TTYH1	Q9H313	450 aa	Predicted RBP	13.93	□□□□□ -0.18
TPRKB-210	ENST00000497464	SAP30BP	Q9UHR5	308 aa	Known RBP	13.93	□□□□□ -0.18
TPRKB-210	ENST00000497464	NOB1	Q9ULX3	412 aa	Known RBP	13.93	□□□□□ -0.18
TPRKB-210	ENST00000497464	MYH1	P12882	1939 aa		13.92	□□□□□ -0.18
TPRKB-210	ENST00000497464	CYBA	P13498	195 aa		13.92	□□□□□ -0.18
TPRKB-210	ENST00000497464	PPP4C	P60510	307 aa		13.92	□□□□□ -0.18
TPRKB-210	ENST00000497464	GRB14	Q14449	540 aa		13.92	□□□□□ -0.18
TPRKB-210	ENST00000497464	SLC39A5	Q6ZMH5	540 aa		13.92	□□□□□ -0.18
TPRKB-210	ENST00000497464	TRPV1	Q8NER1	839 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms