RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 CCNA1P78396 465 aa12.95□□□□□ -0.34
TOM1-217ENST00000497448 TLE2Q04725 743 aa12.95□□□□□ -0.34
TOM1-217ENST00000497448 AKNAD1Q5T1N1 836 aa12.95□□□□□ -0.34
TOM1-217ENST00000497448 SPTY2D1Q68D10 685 aaPredicted RBP12.95□□□□□ -0.34
TOM1-217ENST00000497448 ERICH6Q7L0X2 663 aa12.95□□□□□ -0.34
TOM1-217ENST00000497448 FERMT2Q96AC1 680 aa12.95□□□□□ -0.34
TOM1-217ENST00000497448 NECAB3Q96P71 396 aaPredicted RBP12.95□□□□□ -0.34
TOM1-217ENST00000497448 C1QTNF1Q9BXJ1 281 aa12.95□□□□□ -0.34
TOM1-217ENST00000497448 USP44Q9H0E7 712 aa12.95□□□□□ -0.34
TOM1-217ENST00000497448 CEP126Q9P2H0 1117 aa12.95□□□□□ -0.34
TOM1-217ENST00000497448 ZBTB21Q9ULJ3 1066 aa12.95□□□□□ -0.34
TOM1-217ENST00000497448 IVNS1ABPQ9Y6Y0 642 aa12.95□□□□□ -0.34
TOM1-217ENST00000497448 ANP32CO43423 234 aa12.94□□□□□ -0.34
TOM1-217ENST00000497448 MAP4K4O95819 1239 aaPredicted RBP12.94□□□□□ -0.34
TOM1-217ENST00000497448 FPGSQ05932 587 aa12.94□□□□□ -0.34
TOM1-217ENST00000497448 WDR63Q8IWG1 891 aa12.94□□□□□ -0.34
TOM1-217ENST00000497448 PRDM12Q9H4Q4 367 aa12.94□□□□□ -0.34
TOM1-217ENST00000497448 PI4KBQ9UBF8 816 aa12.94□□□□□ -0.34
TOM1-217ENST00000497448 FBXO3Q9UK99 471 aa12.94□□□□□ -0.34
TOM1-217ENST00000497448 KIAA0355O15063 1070 aa12.93□□□□□ -0.34
TOM1-217ENST00000497448 SEPT4O43236 478 aa12.93□□□□□ -0.34
TOM1-217ENST00000497448 LRRC41Q15345 812 aa12.93□□□□□ -0.34
TOM1-217ENST00000497448 CCDC184Q52MB2 194 aa12.93□□□□□ -0.34
TOM1-217ENST00000497448 FAM47AQ5JRC9 791 aa12.93□□□□□ -0.34
TOM1-217ENST00000497448 OLFML2BQ68BL8 750 aa12.93□□□□□ -0.34
TOM1-217ENST00000497448 USP17L2Q6R6M4 530 aa12.93□□□□□ -0.34
TOM1-217ENST00000497448 TEX11Q8IYF3 940 aa12.93□□□□□ -0.34
TOM1-217ENST00000497448 IL27Q8NEV9 243 aa12.93□□□□□ -0.34
TOM1-217ENST00000497448 NSUN4Q96CB9 384 aaKnown RBP12.93□□□□□ -0.34
TOM1-217ENST00000497448 C12orf42Q96LP6 360 aa12.93□□□□□ -0.34
TOM1-217ENST00000497448 BTBD7Q9P203 1132 aa12.93□□□□□ -0.34
TOM1-217ENST00000497448 HCN4Q9Y3Q4 1203 aa12.93□□□□□ -0.34
TOM1-217ENST00000497448 ARIH1Q9Y4X5 557 aaPredicted RBP12.93□□□□□ -0.34
TOM1-217ENST00000497448 TACC3Q9Y6A5 838 aa12.93□□□□□ -0.34
TOM1-217ENST00000497448 RAG1P15918 1043 aa12.92□□□□□ -0.34
TOM1-217ENST00000497448 PBX2P40425 430 aa12.92□□□□□ -0.34
TOM1-217ENST00000497448 MYO9BQ13459 2157 aa12.92□□□□□ -0.34
TOM1-217ENST00000497448 ADGRE1Q14246 886 aa12.92□□□□□ -0.34
TOM1-217ENST00000497448 CCDC85BQ15834 202 aaPredicted RBP12.92□□□□□ -0.34
TOM1-217ENST00000497448 ZYXQ15942 572 aaKnown RBP12.92□□□□□ -0.34
TOM1-217ENST00000497448 SH3RF3Q8TEJ3 882 aaPredicted RBP12.92□□□□□ -0.34
TOM1-217ENST00000497448 PBX4Q9BYU1 374 aa12.92□□□□□ -0.34
TOM1-217ENST00000497448 DHX36Q9H2U1 1008 aaKnown RBP12.92□□□□□ -0.34
TOM1-217ENST00000497448 GINM1Q9NU53 330 aa12.92□□□□□ -0.34
TOM1-217ENST00000497448 SALL2Q9Y467 1007 aaPredicted RBP12.92□□□□□ -0.34
TOM1-217ENST00000497448 USP17L15C9J2P7 530 aa12.91□□□□□ -0.34
TOM1-217ENST00000497448 USP17L13C9JLJ4 530 aa12.91□□□□□ -0.34
TOM1-217ENST00000497448 USP17L11C9JVI0 530 aa12.91□□□□□ -0.34
TOM1-217ENST00000497448 USP17L18D6R9N7 530 aa12.91□□□□□ -0.34
TOM1-217ENST00000497448 USP17L22D6RA61 530 aa12.91□□□□□ -0.34
TOM1-217ENST00000497448 USP17L17D6RBQ6 530 aa12.91□□□□□ -0.34
TOM1-217ENST00000497448 USP17L19D6RCP7 530 aa12.91□□□□□ -0.34
TOM1-217ENST00000497448 USP17L20D6RJB6 530 aa12.91□□□□□ -0.34
TOM1-217ENST00000497448 PQBP1O60828 265 aaKnown RBP12.91□□□□□ -0.34
TOM1-217ENST00000497448 ADORA2AP29274 412 aa12.91□□□□□ -0.34
TOM1-217ENST00000497448 IL15P40933 162 aaPredicted RBP12.91□□□□□ -0.34
TOM1-217ENST00000497448 GSTO1P78417 241 aa12.91□□□□□ -0.34
TOM1-217ENST00000497448 USP17L24Q0WX57 530 aa12.91□□□□□ -0.34
TOM1-217ENST00000497448 PI16Q6UXB8 463 aa12.91□□□□□ -0.34
TOM1-217ENST00000497448 LBX2Q6XYB7 198 aa12.91□□□□□ -0.34
TOM1-217ENST00000497448 METTL16Q86W50 562 aaKnown RBP12.91□□□□□ -0.34
TOM1-217ENST00000497448 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.91□□□□□ -0.345e-11■□□□□ 10.1
TOM1-217ENST00000497448 PHF24Q9UPV7 400 aa12.91□□□□□ -0.34
TOM1-217ENST00000497448 PA2G4Q9UQ80 394 aaKnown RBP12.91□□□□□ -0.34
TOM1-217ENST00000497448 FLT1P17948 1338 aa12.9□□□□□ -0.34
TOM1-217ENST00000497448 MYH1P12882 1939 aa12.9□□□□□ -0.34
TOM1-217ENST00000497448 SMCHD1A6NHR9 2005 aa12.9□□□□□ -0.34
TOM1-217ENST00000497448 SPDYE16A6NNV3 312 aaPredicted RBP12.9□□□□□ -0.34
TOM1-217ENST00000497448 GRXCR1A8MXD5 290 aa12.9□□□□□ -0.34
TOM1-217ENST00000497448 LDHCP07864 332 aa12.9□□□□□ -0.34
TOM1-217ENST00000497448 VCAM1P19320 739 aa12.9□□□□□ -0.34
TOM1-217ENST00000497448 CATSPERGQ6ZRH7 1159 aa12.9□□□□□ -0.34
TOM1-217ENST00000497448 DPP9Q86TI2 863 aa12.9□□□□□ -0.34
TOM1-217ENST00000497448 CRACR2BQ8N4Y2 399 aaPredicted RBP12.9□□□□□ -0.34
TOM1-217ENST00000497448 FEZ1Q99689 392 aa12.9□□□□□ -0.34
TOM1-217ENST00000497448 LRFN3Q9BTN0 628 aa12.9□□□□□ -0.34
TOM1-217ENST00000497448 LRRC37A2A6NM11 1700 aa12.9□□□□□ -0.34
TOM1-217ENST00000497448 PTPRCP08575 1304 aa12.89□□□□□ -0.35
TOM1-217ENST00000497448 A0A1B0GUL7 405 aa12.89□□□□□ -0.35
TOM1-217ENST00000497448 A0A1W2PQ45 241 aaPredicted RBP12.89□□□□□ -0.35
TOM1-217ENST00000497448 A0A1W2PQY0 241 aa12.89□□□□□ -0.35
TOM1-217ENST00000497448 TIMM10P62072 90 aa12.89□□□□□ -0.35
TOM1-217ENST00000497448 PRAMEF19Q5SWL8 479 aa12.89□□□□□ -0.35
TOM1-217ENST00000497448 CCDC129Q6ZRS4 1044 aa12.89□□□□□ -0.35
TOM1-217ENST00000497448 TBC1D9Q6ZT07 1266 aa12.89□□□□□ -0.35
TOM1-217ENST00000497448 MAPKAPK5Q8IW41 473 aa12.89□□□□□ -0.35
TOM1-217ENST00000497448 MRPL50Q8N5N7 158 aaKnown RBP12.89□□□□□ -0.35
TOM1-217ENST00000497448 XAGE2Q96GT9 111 aa12.89□□□□□ -0.35
TOM1-217ENST00000497448 TRIM34Q9BYJ4 488 aa12.89□□□□□ -0.35
TOM1-217ENST00000497448 TMEM39AQ9NV64 488 aa12.89□□□□□ -0.35
TOM1-217ENST00000497448 RAI14Q9P0K7 980 aa12.89□□□□□ -0.35
TOM1-217ENST00000497448 CXXC1Q9P0U4 656 aaPredicted RBP12.89□□□□□ -0.35
TOM1-217ENST00000497448 HMG20BQ9P0W2 317 aa12.89□□□□□ -0.35
TOM1-217ENST00000497448 ROBO3Q96MS0 1386 aa12.89□□□□□ -0.35
TOM1-217ENST00000497448 MYO5AQ9Y4I1 1855 aaKnown RBP12.89□□□□□ -0.35
TOM1-217ENST00000497448 PARP14Q460N5 1801 aa12.88□□□□□ -0.35
TOM1-217ENST00000497448 COBLO75128 1261 aa12.88□□□□□ -0.35
TOM1-217ENST00000497448 GH2P01242 217 aa12.88□□□□□ -0.35
TOM1-217ENST00000497448 BMP1P13497 986 aa12.88□□□□□ -0.35
TOM1-217ENST00000497448 IGFBP4P22692 258 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms