RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 CTR9Q6PD62 1173 aa13.71□□□□□ -0.21
HLA-B-254ENST00000497377 PRRT2Q7Z6L0 340 aaPredicted RBP13.71□□□□□ -0.21
HLA-B-254ENST00000497377 ANKRD23Q86SG2 305 aa13.71□□□□□ -0.21
HLA-B-254ENST00000497377 ZNF280CQ8ND82 737 aa13.71□□□□□ -0.21
HLA-B-254ENST00000497377 CABP5Q9NP86 173 aa13.71□□□□□ -0.21
HLA-B-254ENST00000497377 ZBTB21Q9ULJ3 1066 aa13.71□□□□□ -0.21
HLA-B-254ENST00000497377 BTBD19C9JJ37 291 aa13.7□□□□□ -0.22
HLA-B-254ENST00000497377 SNPHO15079 494 aa13.7□□□□□ -0.22
HLA-B-254ENST00000497377 TBC1D8O95759 1140 aa13.7□□□□□ -0.22
HLA-B-254ENST00000497377 APPP05067 770 aa13.7□□□□□ -0.22
HLA-B-254ENST00000497377 SHMT1P34896 483 aa13.7□□□□□ -0.22
HLA-B-254ENST00000497377 TDO2P48775 406 aa13.7□□□□□ -0.22
HLA-B-254ENST00000497377 MFAP1P55081 439 aaKnown RBP13.7□□□□□ -0.22
HLA-B-254ENST00000497377 ABCB5Q2M3G0 1257 aa13.7□□□□□ -0.22
HLA-B-254ENST00000497377 MCMDC2Q4G0Z9 681 aa13.7□□□□□ -0.22
HLA-B-254ENST00000497377 TTC22Q5TAA0 569 aa13.7□□□□□ -0.22
HLA-B-254ENST00000497377 ERICH6BQ5W0A0 696 aa13.7□□□□□ -0.22
HLA-B-254ENST00000497377 C16orf86Q6ZW13 317 aa13.7□□□□□ -0.22
HLA-B-254ENST00000497377 CCDC17Q96LX7 622 aa13.7□□□□□ -0.22
HLA-B-254ENST00000497377 SEC62Q99442 399 aaKnown RBP13.7□□□□□ -0.22
HLA-B-254ENST00000497377 ZFYVE28Q9HCC9 887 aa13.7□□□□□ -0.22
HLA-B-254ENST00000497377 SLC45A1Q9Y2W3 748 aa13.7□□□□□ -0.22
HLA-B-254ENST00000497377 CASP8AP2Q9UKL3 1982 aa13.69□□□□□ -0.22
HLA-B-254ENST00000497377 TRIM75PA6NK02 468 aa13.69□□□□□ -0.22
HLA-B-254ENST00000497377 C19orf81C9J6K1 198 aa13.69□□□□□ -0.22
HLA-B-254ENST00000497377 GPR25O00155 361 aa13.69□□□□□ -0.22
HLA-B-254ENST00000497377 GDF11O95390 407 aa13.69□□□□□ -0.22
HLA-B-254ENST00000497377 GH2P01242 217 aa13.69□□□□□ -0.22
HLA-B-254ENST00000497377 CYP2D6P10635 497 aa13.69□□□□□ -0.22
HLA-B-254ENST00000497377 SDSP20132 328 aa13.69□□□□□ -0.22
HLA-B-254ENST00000497377 SPP2Q13103 211 aa13.69□□□□□ -0.22
HLA-B-254ENST00000497377 MOGSQ13724 837 aa13.69□□□□□ -0.22
HLA-B-254ENST00000497377 TAF1CQ15572 869 aaPredicted RBP13.69□□□□□ -0.22
HLA-B-254ENST00000497377 IFNL3Q8IZI9 196 aa13.69□□□□□ -0.22
HLA-B-254ENST00000497377 FAM43AQ8N2R8 423 aa13.69□□□□□ -0.22
HLA-B-254ENST00000497377 PROCA1Q8NCQ7 364 aaPredicted RBP13.69□□□□□ -0.22
HLA-B-254ENST00000497377 CCDC136Q96JN2 1154 aa13.69□□□□□ -0.22
HLA-B-254ENST00000497377 NAPBQ9H115 298 aa13.69□□□□□ -0.22
HLA-B-254ENST00000497377 ZNF287Q9HBT7 754 aa13.69□□□□□ -0.22
HLA-B-254ENST00000497377 DIAPH3Q9NSV4 1193 aa13.69□□□□□ -0.22
HLA-B-254ENST00000497377 ROBO3Q96MS0 1386 aa13.69□□□□□ -0.22
HLA-B-254ENST00000497377 PDHXO00330 501 aa13.68□□□□□ -0.22
HLA-B-254ENST00000497377 ST18O60284 1047 aa13.68□□□□□ -0.22
HLA-B-254ENST00000497377 CDK8P49336 464 aa13.68□□□□□ -0.22
HLA-B-254ENST00000497377 CRHR2Q13324 411 aa13.68□□□□□ -0.22
HLA-B-254ENST00000497377 SH3D19Q5HYK7 790 aa13.68□□□□□ -0.22
HLA-B-254ENST00000497377 COL13A1Q5TAT6 717 aaPredicted RBP13.68□□□□□ -0.22
HLA-B-254ENST00000497377 TMEM179Q6ZVK1 233 aa13.68□□□□□ -0.22
HLA-B-254ENST00000497377 FAM227BQ96M60 508 aa13.68□□□□□ -0.22
HLA-B-254ENST00000497377 EPB41L4AQ9HCS5 686 aaPredicted RBP13.68□□□□□ -0.22
HLA-B-254ENST00000497377 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.68□□□□□ -0.22
HLA-B-254ENST00000497377 LOC285556D6RIA3 1793 aa13.68□□□□□ -0.22
HLA-B-254ENST00000497377 CYP2D7A0A087X1C5 515 aa13.67□□□□□ -0.22
HLA-B-254ENST00000497377 A0A0D9SFI3 127 aa13.67□□□□□ -0.22
HLA-B-254ENST00000497377 USP17L10C9JJH3 530 aa13.67□□□□□ -0.22
HLA-B-254ENST00000497377 FKTNO75072 461 aa13.67□□□□□ -0.22
HLA-B-254ENST00000497377 SLC3A2P08195 630 aaKnown RBP13.67□□□□□ -0.22
HLA-B-254ENST00000497377 BACE1P56817 501 aa13.67□□□□□ -0.22
HLA-B-254ENST00000497377 JAG1P78504 1218 aa13.67□□□□□ -0.22
HLA-B-254ENST00000497377 NMIQ13287 307 aaPredicted RBP13.67□□□□□ -0.22
HLA-B-254ENST00000497377 PABPC4Q13310 644 aaKnown RBP eCLIP13.67□□□□□ -0.22
HLA-B-254ENST00000497377 ALX1Q15699 326 aa13.67□□□□□ -0.22
HLA-B-254ENST00000497377 GPAT2Q6NUI2 795 aa13.67□□□□□ -0.22
HLA-B-254ENST00000497377 GADL1Q6ZQY3 521 aa13.67□□□□□ -0.22
HLA-B-254ENST00000497377 CCDC84Q86UT8 332 aaPredicted RBP13.67□□□□□ -0.22
HLA-B-254ENST00000497377 DYNLL2Q96FJ2 89 aa13.67□□□□□ -0.22
HLA-B-254ENST00000497377 PARK7Q99497 189 aaKnown RBP13.67□□□□□ -0.22
HLA-B-254ENST00000497377 TMOD4Q9NZQ9 345 aa13.67□□□□□ -0.22
HLA-B-254ENST00000497377 AGTPBP1Q9UPW5 1226 aa13.67□□□□□ -0.22
HLA-B-254ENST00000497377 CCDC171Q6TFL3 1326 aa13.66□□□□□ -0.22
HLA-B-254ENST00000497377 MINDY4BA8MYZ0 360 aa13.66□□□□□ -0.22
HLA-B-254ENST00000497377 MPHOSPH10O00566 681 aaKnown RBP13.66□□□□□ -0.22
HLA-B-254ENST00000497377 TLR2O60603 784 aa13.66□□□□□ -0.22
HLA-B-254ENST00000497377 GSPT1P15170 499 aaKnown RBP13.66□□□□□ -0.22
HLA-B-254ENST00000497377 MTMR2Q13614 643 aa13.66□□□□□ -0.22
HLA-B-254ENST00000497377 RAB3GAP1Q15042 981 aa13.66□□□□□ -0.22
HLA-B-254ENST00000497377 CCDC129Q6ZRS4 1044 aa13.66□□□□□ -0.22
HLA-B-254ENST00000497377 SLC44A5Q8NCS7 719 aa13.66□□□□□ -0.22
HLA-B-254ENST00000497377 ZNF296Q8WUU4 475 aaPredicted RBP13.66□□□□□ -0.22
HLA-B-254ENST00000497377 PNMA3Q9UL41 463 aa13.66□□□□□ -0.22
HLA-B-254ENST00000497377 ZMYM6O95789 1325 aa13.65□□□□□ -0.22
HLA-B-254ENST00000497377 RIOK3O14730 519 aaKnown RBP13.65□□□□□ -0.22
HLA-B-254ENST00000497377 USP14P54578 494 aa13.65□□□□□ -0.22
HLA-B-254ENST00000497377 HMGCS2P54868 508 aa13.65□□□□□ -0.22
HLA-B-254ENST00000497377 PDE4BQ07343 736 aa13.65□□□□□ -0.22
HLA-B-254ENST00000497377 SHROOM1Q2M3G4 852 aaPredicted RBP13.65□□□□□ -0.22
HLA-B-254ENST00000497377 USP17L2Q6R6M4 530 aa13.65□□□□□ -0.22
HLA-B-254ENST00000497377 RUFY2Q8WXA3 655 aa13.65□□□□□ -0.22
HLA-B-254ENST00000497377 ERO1AQ96HE7 468 aa13.65□□□□□ -0.22
HLA-B-254ENST00000497377 FEZ1Q99689 392 aa13.65□□□□□ -0.22
HLA-B-254ENST00000497377 KIAA1683Q9H0B3 1180 aa13.65□□□□□ -0.22
HLA-B-254ENST00000497377 R3HDMLQ9H3Y0 253 aa13.65□□□□□ -0.22
HLA-B-254ENST00000497377 MKNK2Q9HBH9 465 aa13.65□□□□□ -0.22
HLA-B-254ENST00000497377 FOXP2O15409 715 aa13.64□□□□□ -0.23
HLA-B-254ENST00000497377 HSPD1P10809 573 aaKnown RBP13.64□□□□□ -0.23
HLA-B-254ENST00000497377 GUCY1A2P33402 732 aa13.64□□□□□ -0.23
HLA-B-254ENST00000497377 SP3Q02447 781 aa13.64□□□□□ -0.23
HLA-B-254ENST00000497377 PPARAQ07869 468 aa13.64□□□□□ -0.23
HLA-B-254ENST00000497377 SEPT2Q15019 361 aa13.64□□□□□ -0.23
HLA-B-254ENST00000497377 ARHGEF6Q15052 776 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms