RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 F8W735 103 aaPredicted RBP8.63□□□□□ -1.03
MSH5-219ENST00000497269 LIG1P18858 919 aa8.63□□□□□ -1.03
MSH5-219ENST00000497269 NOS3P29474 1203 aa8.63□□□□□ -1.03
MSH5-219ENST00000497269 AP3B2Q13367 1082 aa8.63□□□□□ -1.03
MSH5-219ENST00000497269 PLA2G4EQ3MJ16 856 aa8.63□□□□□ -1.03
MSH5-219ENST00000497269 RASIP1Q5U651 963 aa8.63□□□□□ -1.03
MSH5-219ENST00000497269 ALYREFQ86V81 257 aaKnown RBP8.63□□□□□ -1.03
MSH5-219ENST00000497269 UNC5CLQ8IV45 518 aa8.63□□□□□ -1.03
MSH5-219ENST00000497269 WFDC12Q8WWY7 111 aa8.63□□□□□ -1.03
MSH5-219ENST00000497269 NRSN2Q9GZP1 204 aa8.63□□□□□ -1.03
MSH5-219ENST00000497269 MYOM2P54296 1465 aa8.63□□□□□ -1.03
MSH5-219ENST00000497269 IFT172Q9UG01 1749 aa8.63□□□□□ -1.03
MSH5-219ENST00000497269 DHX57Q6P158 1386 aaKnown RBP8.62□□□□□ -1.03
MSH5-219ENST00000497269 USP31Q70CQ4 1352 aa8.62□□□□□ -1.03
MSH5-219ENST00000497269 LAMC1P11047 1609 aa8.62□□□□□ -1.03
MSH5-219ENST00000497269 CDC42BPGQ6DT37 1551 aa8.62□□□□□ -1.03
MSH5-219ENST00000497269 FAM83GA6ND36 823 aa8.62□□□□□ -1.03
MSH5-219ENST00000497269 GSTP1P09211 210 aaKnown RBP8.62□□□□□ -1.03
MSH5-219ENST00000497269 NME2P22392 152 aa8.62□□□□□ -1.03
MSH5-219ENST00000497269 NRG1Q02297 640 aaPredicted RBP8.62□□□□□ -1.03
MSH5-219ENST00000497269 NUTM2GQ5VZR2 741 aa8.62□□□□□ -1.03
MSH5-219ENST00000497269 TTBK2Q6IQ55 1244 aa8.62□□□□□ -1.03
MSH5-219ENST00000497269 SV2BQ7L1I2 683 aa8.62□□□□□ -1.03
MSH5-219ENST00000497269 RAD18Q9NS91 495 aa8.62□□□□□ -1.03
MSH5-219ENST00000497269 FMN2Q9NZ56 1722 aa8.62□□□□□ -1.03
MSH5-219ENST00000497269 PIK3C2GO75747 1445 aa8.62□□□□□ -1.03
MSH5-219ENST00000497269 COL22A1Q8NFW1 1626 aaPredicted RBP8.62□□□□□ -1.03
MSH5-219ENST00000497269 RAB3GAP2Q9H2M9 1393 aa8.61□□□□□ -1.03
MSH5-219ENST00000497269 MARF1Q9Y4F3 1742 aaKnown RBP8.61□□□□□ -1.03
MSH5-219ENST00000497269 ARNTP27540 789 aa8.61□□□□□ -1.03
MSH5-219ENST00000497269 ADGRE1Q14246 886 aa8.61□□□□□ -1.03
MSH5-219ENST00000497269 AKAP4Q5JQC9 854 aa8.61□□□□□ -1.03
MSH5-219ENST00000497269 WDR89Q96FK6 387 aaPredicted RBP8.61□□□□□ -1.03
MSH5-219ENST00000497269 ACSBG1Q96GR2 724 aa8.61□□□□□ -1.03
MSH5-219ENST00000497269 RNF208Q9H0X6 261 aa8.61□□□□□ -1.03
MSH5-219ENST00000497269 CCDC86Q9H6F5 360 aaKnown RBP8.61□□□□□ -1.03
MSH5-219ENST00000497269 TLR6Q9Y2C9 796 aa8.61□□□□□ -1.03
MSH5-219ENST00000497269 SAMM50Q9Y512 469 aa8.61□□□□□ -1.03
MSH5-219ENST00000497269 RALGAPBQ86X10 1494 aa8.6□□□□□ -1.03
MSH5-219ENST00000497269 ITGB2P05107 769 aa8.6□□□□□ -1.03
MSH5-219ENST00000497269 LMNB1P20700 586 aa8.6□□□□□ -1.03
MSH5-219ENST00000497269 BMP6P22004 513 aa8.6□□□□□ -1.03
MSH5-219ENST00000497269 ST13P50502 369 aaKnown RBP8.6□□□□□ -1.03
MSH5-219ENST00000497269 LDLRAD1Q5T700 205 aa8.6□□□□□ -1.03
MSH5-219ENST00000497269 GPAT2Q6NUI2 795 aa8.6□□□□□ -1.03
MSH5-219ENST00000497269 FDX2Q6P4F2 183 aa8.6□□□□□ -1.03
MSH5-219ENST00000497269 TXNRD3Q86VQ6 643 aa8.6□□□□□ -1.03
MSH5-219ENST00000497269 GLI3P10071 1580 aa8.6□□□□□ -1.03
MSH5-219ENST00000497269 BRWD3Q6RI45 1802 aa8.59□□□□□ -1.03
MSH5-219ENST00000497269 PRR36Q9H6K5 1346 aa8.59□□□□□ -1.03
MSH5-219ENST00000497269 MINDY4BA8MYZ0 360 aa8.59□□□□□ -1.03
MSH5-219ENST00000497269 DRD2P14416 443 aa8.59□□□□□ -1.03
MSH5-219ENST00000497269 GATA4P43694 442 aa8.59□□□□□ -1.03
MSH5-219ENST00000497269 LIG3P49916 1009 aa8.59□□□□□ -1.03
MSH5-219ENST00000497269 C9orf131Q5VYM1 1079 aa8.59□□□□□ -1.03
MSH5-219ENST00000497269 LLGL2Q6P1M3 1020 aa8.59□□□□□ -1.03
MSH5-219ENST00000497269 PDZD3Q86UT5 571 aa8.59□□□□□ -1.03
MSH5-219ENST00000497269 C12orf50Q8NA57 414 aaPredicted RBP8.59□□□□□ -1.03
MSH5-219ENST00000497269 NGDNQ8NEJ9 315 aaKnown RBP8.59□□□□□ -1.03
MSH5-219ENST00000497269 MEGF10Q96KG7 1140 aa8.59□□□□□ -1.03
MSH5-219ENST00000497269 EMILIN2Q9BXX0 1053 aa8.59□□□□□ -1.03
MSH5-219ENST00000497269 COPRSQ9NQ92 184 aa8.59□□□□□ -1.03
MSH5-219ENST00000497269 BTG4Q9NY30 223 aa8.59□□□□□ -1.03
MSH5-219ENST00000497269 GGT7Q9UJ14 662 aa8.59□□□□□ -1.03
MSH5-219ENST00000497269 AP4E1Q9UPM8 1137 aa8.59□□□□□ -1.03
MSH5-219ENST00000497269 PCDHB5Q9Y5E4 795 aa8.59□□□□□ -1.03
MSH5-219ENST00000497269 TECPR2O15040 1411 aa8.59□□□□□ -1.03
MSH5-219ENST00000497269 TNS3Q68CZ2 1445 aa8.58□□□□□ -1.04
MSH5-219ENST00000497269 PRAG1Q86YV5 1406 aa8.58□□□□□ -1.04
MSH5-219ENST00000497269 SART1O43290 800 aaKnown RBP8.58□□□□□ -1.04
MSH5-219ENST00000497269 ZNF862O60290 1169 aa8.58□□□□□ -1.04
MSH5-219ENST00000497269 SEPT6Q14141 434 aa8.58□□□□□ -1.04
MSH5-219ENST00000497269 CHRNA2Q15822 529 aa8.58□□□□□ -1.04
MSH5-219ENST00000497269 EXOSC6Q5RKV6 272 aaKnown RBP8.58□□□□□ -1.04
MSH5-219ENST00000497269 GPBAR1Q8TDU6 330 aa8.58□□□□□ -1.04
MSH5-219ENST00000497269 KNDC1Q76NI1 1749 aa8.57□□□□□ -1.04
MSH5-219ENST00000497269 GBP2P32456 591 aaPredicted RBP8.57□□□□□ -1.04
MSH5-219ENST00000497269 ZNF76P36508 570 aa8.57□□□□□ -1.04
MSH5-219ENST00000497269 ZC3H6P61129 1189 aaKnown RBP8.57□□□□□ -1.04
MSH5-219ENST00000497269 FAM160A1Q05DH4 1040 aa8.57□□□□□ -1.04
MSH5-219ENST00000497269 VPS72Q15906 364 aa8.57□□□□□ -1.04
MSH5-219ENST00000497269 KRT27Q7Z3Y8 459 aa8.57□□□□□ -1.04
MSH5-219ENST00000497269 TMEM130Q8N3G9 435 aa8.57□□□□□ -1.04
MSH5-219ENST00000497269 WDR18Q9BV38 432 aa8.57□□□□□ -1.04
MSH5-219ENST00000497269 TMPRSS13Q9BYE2 586 aa8.57□□□□□ -1.04
MSH5-219ENST00000497269 CYP4F12Q9HCS2 524 aa8.57□□□□□ -1.04
MSH5-219ENST00000497269 USP35Q9P2H5 1018 aa8.57□□□□□ -1.04
MSH5-219ENST00000497269 CSADQ9Y600 493 aa8.57□□□□□ -1.04
MSH5-219ENST00000497269 SLIT2O94813 1529 aa8.57□□□□□ -1.04
MSH5-219ENST00000497269 EP400Q96L91 3159 aa8.57□□□□□ -1.04
MSH5-219ENST00000497269 USP32Q8NFA0 1604 aa8.57□□□□□ -1.04
MSH5-219ENST00000497269 KIF1AQ12756 1690 aa8.56□□□□□ -1.04
MSH5-219ENST00000497269 AOC2O75106 756 aa8.56□□□□□ -1.04
MSH5-219ENST00000497269 PREPP48147 710 aa8.56□□□□□ -1.04
MSH5-219ENST00000497269 DOC2BQ14184 412 aa8.56□□□□□ -1.04
MSH5-219ENST00000497269 LRRC14Q15048 493 aa8.56□□□□□ -1.04
MSH5-219ENST00000497269 HS2ST1Q7LGA3 356 aa8.56□□□□□ -1.04
MSH5-219ENST00000497269 RELL1Q8IUW5 271 aa8.56□□□□□ -1.04
MSH5-219ENST00000497269 ANKRD24Q8TF21 1146 aa8.56□□□□□ -1.04
MSH5-219ENST00000497269 JARID2Q92833 1246 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms