RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 CCDC27Q2M243 656 aa6□□□□□ -1.45
VPS26A-208ENST00000497022 MEI1Q5TIA1 1274 aa6□□□□□ -1.45
VPS26A-208ENST00000497022 TMC4Q7Z404 712 aa6□□□□□ -1.45
VPS26A-208ENST00000497022 MYLIPQ8WY64 445 aa6□□□□□ -1.45
VPS26A-208ENST00000497022 ELMO3Q96BJ8 720 aa6□□□□□ -1.45
VPS26A-208ENST00000497022 KCNK12Q9HB15 430 aa6□□□□□ -1.45
VPS26A-208ENST00000497022 TMEM59LQ9UK28 342 aa6□□□□□ -1.45
VPS26A-208ENST00000497022 HPXP02790 462 aa5.99□□□□□ -1.45
VPS26A-208ENST00000497022 ERCC3P19447 782 aa5.99□□□□□ -1.45
VPS26A-208ENST00000497022 RPS26P62854 115 aaKnown RBP5.99□□□□□ -1.45
VPS26A-208ENST00000497022 LRFN4Q6PJG9 635 aa5.99□□□□□ -1.45
VPS26A-208ENST00000497022 DBX2Q6ZNG2 339 aa5.99□□□□□ -1.45
VPS26A-208ENST00000497022 TMPRSS7Q7RTY8 843 aa5.99□□□□□ -1.45
VPS26A-208ENST00000497022 MFSD2AQ8NA29 543 aa5.99□□□□□ -1.45
VPS26A-208ENST00000497022 GAL3ST3Q96A11 431 aa5.99□□□□□ -1.45
VPS26A-208ENST00000497022 FAM161BQ96MY7 647 aa5.99□□□□□ -1.45
VPS26A-208ENST00000497022 CTSHP09668 335 aa5.98□□□□□ -1.45
VPS26A-208ENST00000497022 KIR3DL1P43629 444 aa5.98□□□□□ -1.45
VPS26A-208ENST00000497022 TAGLNQ01995 201 aaKnown RBP5.98□□□□□ -1.45
VPS26A-208ENST00000497022 TAF1CQ15572 869 aaPredicted RBP5.98□□□□□ -1.45
VPS26A-208ENST00000497022 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.98□□□□□ -1.45
VPS26A-208ENST00000497022 AGMOQ6ZNB7 445 aa5.98□□□□□ -1.45
VPS26A-208ENST00000497022 HDXQ7Z353 690 aa5.98□□□□□ -1.45
VPS26A-208ENST00000497022 UBE2FQ969M7 185 aa5.98□□□□□ -1.45
VPS26A-208ENST00000497022 PLPPR2Q96GM1 343 aa5.98□□□□□ -1.45
VPS26A-208ENST00000497022 MIPEPQ99797 713 aa5.98□□□□□ -1.45
VPS26A-208ENST00000497022 IRF2BPLQ9H1B7 796 aa5.98□□□□□ -1.45
VPS26A-208ENST00000497022 PCDHB5Q9Y5E4 795 aa5.98□□□□□ -1.45
VPS26A-208ENST00000497022 USP31Q70CQ4 1352 aa5.97□□□□□ -1.45
VPS26A-208ENST00000497022 CDK8P49336 464 aa5.97□□□□□ -1.45
VPS26A-208ENST00000497022 LIG3P49916 1009 aa5.97□□□□□ -1.45
VPS26A-208ENST00000497022 SLBPQ14493 270 aaKnown RBP eCLIP5.97□□□□□ -1.45
VPS26A-208ENST00000497022 MAP3K11Q16584 847 aa5.97□□□□□ -1.45
VPS26A-208ENST00000497022 IRF2BP1Q8IU81 584 aa5.97□□□□□ -1.45
VPS26A-208ENST00000497022 ZCCHC4Q9H5U6 513 aa5.97□□□□□ -1.45
VPS26A-208ENST00000497022 SNCAIPQ9Y6H5 919 aa5.97□□□□□ -1.45
VPS26A-208ENST00000497022 CNTNAP4Q9C0A0 1308 aa5.97□□□□□ -1.45
VPS26A-208ENST00000497022 DNAJC25-GNG10A0A024R161 153 aa5.96□□□□□ -1.46
VPS26A-208ENST00000497022 PRAMEF27A3QJZ7 478 aa5.96□□□□□ -1.46
VPS26A-208ENST00000497022 FOXD2O60548 495 aaPredicted RBP5.96□□□□□ -1.46
VPS26A-208ENST00000497022 SEMA7AO75326 666 aa5.96□□□□□ -1.46
VPS26A-208ENST00000497022 LMNB1P20700 586 aa5.96□□□□□ -1.46
VPS26A-208ENST00000497022 CYP7A1P22680 504 aa5.96□□□□□ -1.46
VPS26A-208ENST00000497022 ST13P50502 369 aaKnown RBP5.96□□□□□ -1.46
VPS26A-208ENST00000497022 SEPT6Q14141 434 aa5.96□□□□□ -1.46
VPS26A-208ENST00000497022 RALGPS1Q5JS13 557 aa5.96□□□□□ -1.46
VPS26A-208ENST00000497022 WIPI1Q5MNZ9 446 aaPredicted RBP5.96□□□□□ -1.46
VPS26A-208ENST00000497022 BAHD1Q8TBE0 780 aaPredicted RBP5.96□□□□□ -1.46
VPS26A-208ENST00000497022 PIWIL2Q8TC59 973 aaKnown RBP5.96□□□□□ -1.46
VPS26A-208ENST00000497022 NOC4LQ9BVI4 516 aaKnown RBP5.96□□□□□ -1.46
VPS26A-208ENST00000497022 WNT10AQ9GZT5 417 aa5.96□□□□□ -1.46
VPS26A-208ENST00000497022 ZSWIM5Q9P217 1185 aa5.96□□□□□ -1.46
VPS26A-208ENST00000497022 A0A0G2JLL6 359 aaPredicted RBP5.95□□□□□ -1.46
VPS26A-208ENST00000497022 SORBS3O60504 671 aa5.95□□□□□ -1.46
VPS26A-208ENST00000497022 PEX10O60683 326 aa5.95□□□□□ -1.46
VPS26A-208ENST00000497022 ESR1P03372 595 aa5.95□□□□□ -1.46
VPS26A-208ENST00000497022 RLBP1P12271 317 aa5.95□□□□□ -1.46
VPS26A-208ENST00000497022 SYN1P17600 705 aa5.95□□□□□ -1.46
VPS26A-208ENST00000497022 TFE3P19532 575 aaPredicted RBP5.95□□□□□ -1.46
VPS26A-208ENST00000497022 HK2P52789 917 aa5.95□□□□□ -1.46
VPS26A-208ENST00000497022 LETMD1Q6P1Q0 360 aa5.95□□□□□ -1.46
VPS26A-208ENST00000497022 LILRA2Q8N149 483 aa5.95□□□□□ -1.46
VPS26A-208ENST00000497022 KCNC2Q96PR1 638 aa5.95□□□□□ -1.46
VPS26A-208ENST00000497022 SLC6A17Q9H1V8 727 aa5.95□□□□□ -1.46
VPS26A-208ENST00000497022 GFRA2O00451 464 aa5.94□□□□□ -1.46
VPS26A-208ENST00000497022 BMP7P18075 431 aa5.94□□□□□ -1.46
VPS26A-208ENST00000497022 ERVFC1P60507 584 aa5.94□□□□□ -1.46
VPS26A-208ENST00000497022 ETF1P62495 437 aaKnown RBP5.94□□□□□ -1.46
VPS26A-208ENST00000497022 DLG4P78352 724 aa5.94□□□□□ -1.46
VPS26A-208ENST00000497022 KRTAP5-3Q6L8H2 238 aa5.94□□□□□ -1.46
VPS26A-208ENST00000497022 CRELD1Q96HD1 420 aa5.94□□□□□ -1.46
VPS26A-208ENST00000497022 RNF32Q9H0A6 362 aa5.94□□□□□ -1.46
VPS26A-208ENST00000497022 MIR1-1HGQ9H1L0 117 aa5.94□□□□□ -1.46
VPS26A-208ENST00000497022 FBRSQ9HAH7 460 aa5.94□□□□□ -1.46
VPS26A-208ENST00000497022 TLR6Q9Y2C9 796 aa5.94□□□□□ -1.46
VPS26A-208ENST00000497022 CBX7O95931 251 aa5.93□□□□□ -1.46
VPS26A-208ENST00000497022 TNK2Q07912 1038 aa5.93□□□□□ -1.46
VPS26A-208ENST00000497022 NFIXQ14938 502 aa5.93□□□□□ -1.46
VPS26A-208ENST00000497022 NKG7Q16617 165 aa5.93□□□□□ -1.46
VPS26A-208ENST00000497022 TCERG1LQ5VWI1 586 aa5.93□□□□□ -1.46
VPS26A-208ENST00000497022 HID1Q8IV36 788 aa5.93□□□□□ -1.46
VPS26A-208ENST00000497022 PHC3Q8NDX5 983 aa5.93□□□□□ -1.46
VPS26A-208ENST00000497022 PDZD8Q8NEN9 1154 aa5.93□□□□□ -1.46
VPS26A-208ENST00000497022 MCOLN1Q9GZU1 580 aa5.93□□□□□ -1.46
VPS26A-208ENST00000497022 MRS2Q9HD23 443 aa5.93□□□□□ -1.46
VPS26A-208ENST00000497022 RTEL1Q9NZ71 1219 aa5.93□□□□□ -1.46
VPS26A-208ENST00000497022 TACC3Q9Y6A5 838 aa5.93□□□□□ -1.46
VPS26A-208ENST00000497022 RFXAPO00287 272 aa5.92□□□□□ -1.46
VPS26A-208ENST00000497022 CST3P01034 146 aaPredicted RBP5.92□□□□□ -1.46
VPS26A-208ENST00000497022 GRK4P32298 578 aa5.92□□□□□ -1.46
VPS26A-208ENST00000497022 TSNAXIP1Q2TAA8 658 aa5.92□□□□□ -1.46
VPS26A-208ENST00000497022 TMEM151BQ8IW70 566 aa5.92□□□□□ -1.46
VPS26A-208ENST00000497022 JARID2Q92833 1246 aaPredicted RBP5.92□□□□□ -1.46
VPS26A-208ENST00000497022 VTI1BQ9UEU0 232 aa5.92□□□□□ -1.46
VPS26A-208ENST00000497022 TEX51A0A1B0GUA7 166 aa5.91□□□□□ -1.46
VPS26A-208ENST00000497022 RPL6Q02878 288 aaKnown RBP5.91□□□□□ -1.46
VPS26A-208ENST00000497022 NR0B2Q15466 257 aa5.91□□□□□ -1.46
VPS26A-208ENST00000497022 ZNF385BQ569K4 471 aa5.91□□□□□ -1.46
VPS26A-208ENST00000497022 CCDC84Q86UT8 332 aaPredicted RBP5.91□□□□□ -1.46
VPS26A-208ENST00000497022 OXR1Q8N573 874 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms