RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 KCNC4Q03721 635 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 ITKQ08881 620 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 STRN3Q13033 797 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 TCIRG1Q13488 830 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 GRM3Q14832 879 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 PCBP1Q15365 356 aaKnown RBP eCLIP2.41□□□□□ -2.02
UBR4-217ENST00000497018 SPRED3Q2MJR0 410 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 FAM209AQ5JX71 171 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 TMEM240Q5SV17 173 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 COL13A1Q5TAT6 717 aaPredicted RBP2.41□□□□□ -2.02
UBR4-217ENST00000497018 MEX3CQ5U5Q3 659 aaKnown RBP2.41□□□□□ -2.02
UBR4-217ENST00000497018 SYDE2Q5VT97 1194 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 YOD1Q5VVQ6 348 aaPredicted RBP2.41□□□□□ -2.02
UBR4-217ENST00000497018 CNNM4Q6P4Q7 775 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 IGF2-ASQ6U949 168 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 Q6ZVU0 165 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 EPM2AIP1Q7L775 607 aaPredicted RBP2.41□□□□□ -2.02
UBR4-217ENST00000497018 TPH2Q8IWU9 490 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 LRRC47Q8N1G4 583 aaKnown RBP2.41□□□□□ -2.02
UBR4-217ENST00000497018 CNTD1Q8N815 330 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 GSTCDQ8NEC7 633 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 OR13H1Q8NG92 308 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 ENOX1Q8TC92 643 aaKnown RBP2.41□□□□□ -2.02
UBR4-217ENST00000497018 STK35Q8TDR2 534 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 TMEM40Q8WWA1 233 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 ZSCAN10Q96SZ4 725 aaPredicted RBP2.41□□□□□ -2.02
UBR4-217ENST00000497018 ELAC2Q9BQ52 826 aaKnown RBP2.41□□□□□ -2.02
UBR4-217ENST00000497018 ZKSCAN3Q9BRR0 538 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 DHRS4Q9BTZ2 278 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 GRIP2Q9C0E4 1043 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 MTFR1LQ9H019 292 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 MIR1-1HGQ9H1L0 117 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 PRDM11Q9NQV5 511 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 STRN4Q9NRL3 753 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 AASDHPPTQ9NRN7 309 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 PPP4R2Q9NY27 417 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 GOLGA6AQ9NYA3 693 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 USP25Q9UHP3 1055 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 DAAM1Q9Y4D1 1078 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 SPEF1Q9Y4P9 236 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 PCDHB14Q9Y5E9 798 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 NCOA1Q15788 1441 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 PRR36Q9H6K5 1346 aa2.41□□□□□ -2.02
UBR4-217ENST00000497018 WDR7Q9Y4E6 1490 aa2.4□□□□□ -2.02
UBR4-217ENST00000497018 CAMSAP1Q5T5Y3 1602 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 A0A087WZG4 1122 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 A0A1W2PQU0 124 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 IQCA1LA6NCM1 817 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 PRSS47A8MTI9 375 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 METTL12A8MUP2 240 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 SPATA31C2B4DYI2 1134 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 PRRT4C9JH25 899 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 NFKBIEO00221 500 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 NEMP1O14524 444 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 TNFRSF10CO14798 259 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 EPB41L2O43491 1005 aaKnown RBP2.4□□□□□ -2.03
UBR4-217ENST00000497018 BRINP1O60477 761 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 DNAJA2O60884 412 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 RNASEH2AO75792 299 aaKnown RBP2.4□□□□□ -2.03
UBR4-217ENST00000497018 FBXO21O94952 628 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 CPEP16870 476 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 GPC1P35052 558 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 HALP42357 657 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 ID4P47928 161 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 ERVK-21P61565 698 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 PTPN11Q06124 597 aaPredicted RBP2.4□□□□□ -2.03
UBR4-217ENST00000497018 ZNF252P-AS1Q0IIN9 211 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 PICALMQ13492 652 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 ZNF460Q14592 562 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 KCTD2Q14681 263 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 NBPF1Q3BBV0 1214 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 ALFQ53S48 1182 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 GNASQ5JWF2 1037 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 RC3H1Q5TC82 1133 aaKnown RBP2.4□□□□□ -2.03
UBR4-217ENST00000497018 ANO1Q5XXA6 986 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 ICE2Q659A1 982 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 DIEXFQ68CQ4 756 aaKnown RBP2.4□□□□□ -2.03
UBR4-217ENST00000497018 LHX8Q68G74 356 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 TMEM214Q6NUQ4 689 aaKnown RBP2.4□□□□□ -2.03
UBR4-217ENST00000497018 XRRA1Q6P2D8 792 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 CCDC174Q6PII3 467 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 LVRNQ6Q4G3 990 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 VHLLQ6RSH7 139 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 UNC5AQ6ZN44 842 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 DDX46Q7L014 1031 aaKnown RBP2.4□□□□□ -2.03
UBR4-217ENST00000497018 BRAPQ7Z569 592 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 NKAPQ8N5F7 415 aaKnown RBP2.4□□□□□ -2.03
UBR4-217ENST00000497018 ZNF513Q8N8E2 541 aaPredicted RBP2.4□□□□□ -2.03
UBR4-217ENST00000497018 ENAHQ8N8S7 591 aaPredicted RBP2.4□□□□□ -2.03
UBR4-217ENST00000497018 ANKRD42Q8N9B4 389 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 ZSCAN1Q8NBB4 408 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 C1orf131Q8NDD1 294 aaKnown RBP2.4□□□□□ -2.03
UBR4-217ENST00000497018 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.4□□□□□ -2.03
UBR4-217ENST00000497018 SLC7A14Q8TBB6 771 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 LEO1Q8WVC0 666 aaPredicted RBP2.4□□□□□ -2.03
UBR4-217ENST00000497018 OSBP2Q969R2 916 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 HHIPQ96QV1 700 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 ZIC5Q96T25 663 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 ORAI3Q9BRQ5 295 aa2.4□□□□□ -2.03
UBR4-217ENST00000497018 HERPUD2Q9BSE4 406 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms