RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 M0R2C6 588 aa23.5■■□□□ 1.35
COL20A1-208ENST00000496810 MPHOSPH10O00566 681 aaKnown RBP23.5■■□□□ 1.35
COL20A1-208ENST00000496810 ELNP15502 786 aa23.5■■□□□ 1.35
COL20A1-208ENST00000496810 HOXD10P28358 340 aa23.5■■□□□ 1.35
COL20A1-208ENST00000496810 GRK4P32298 578 aa23.5■■□□□ 1.35
COL20A1-208ENST00000496810 C12orf60Q5U649 245 aa23.5■■□□□ 1.35
COL20A1-208ENST00000496810 ZSCAN25Q6NSZ9 544 aa23.5■■□□□ 1.35
COL20A1-208ENST00000496810 USP17L2Q6R6M4 530 aa23.5■■□□□ 1.35
COL20A1-208ENST00000496810 C12orf42Q96LP6 360 aa23.5■■□□□ 1.35
COL20A1-208ENST00000496810 STRBPQ96SI9 672 aaKnown RBP23.5■■□□□ 1.35
COL20A1-208ENST00000496810 TTC41PQ6P2S7 1318 aa23.5■■□□□ 1.35
COL20A1-208ENST00000496810 AKR1B1P15121 316 aa23.49■■□□□ 1.35
COL20A1-208ENST00000496810 VCAM1P19320 739 aa23.49■■□□□ 1.35
COL20A1-208ENST00000496810 MX1P20591 662 aa23.49■■□□□ 1.35
COL20A1-208ENST00000496810 APPBP2Q92624 585 aa23.49■■□□□ 1.35
COL20A1-208ENST00000496810 KIAA1683Q9H0B3 1180 aa23.49■■□□□ 1.35
COL20A1-208ENST00000496810 MORF4L1Q9UBU8 362 aa23.49■■□□□ 1.35
COL20A1-208ENST00000496810 RNF113AO15541 343 aaKnown RBP23.48■■□□□ 1.35
COL20A1-208ENST00000496810 HDAC1Q13547 482 aaPredicted RBP23.48■■□□□ 1.35
COL20A1-208ENST00000496810 CTR9Q6PD62 1173 aa23.48■■□□□ 1.35
COL20A1-208ENST00000496810 SHISA4Q96DD7 197 aa23.48■■□□□ 1.35
COL20A1-208ENST00000496810 TMEM106CQ9BVX2 250 aa23.48■■□□□ 1.35
COL20A1-208ENST00000496810 EPB41L4AQ9HCS5 686 aaPredicted RBP23.48■■□□□ 1.35
COL20A1-208ENST00000496810 CABP5Q9NP86 173 aa23.48■■□□□ 1.35
COL20A1-208ENST00000496810 KIAA1755Q5JYT7 1200 aa23.47■■□□□ 1.35
COL20A1-208ENST00000496810 ANKRD45Q5TZF3 282 aa23.47■■□□□ 1.35
COL20A1-208ENST00000496810 SEC62Q99442 399 aaKnown RBP23.47■■□□□ 1.35
COL20A1-208ENST00000496810 RBPJLQ9UBG7 517 aa23.47■■□□□ 1.35
COL20A1-208ENST00000496810 GSG1L2A8MUP6 293 aa23.46■■□□□ 1.35
COL20A1-208ENST00000496810 CEP290O15078 2479 aa23.46■■□□□ 1.35
COL20A1-208ENST00000496810 GPAA1O43292 621 aa23.46■■□□□ 1.35
COL20A1-208ENST00000496810 ADCY3O60266 1144 aa23.46■■□□□ 1.35
COL20A1-208ENST00000496810 CDK8P49336 464 aa23.46■■□□□ 1.35
COL20A1-208ENST00000496810 C16orf86Q6ZW13 317 aa23.46■■□□□ 1.35
COL20A1-208ENST00000496810 PAGR1Q9BTK6 254 aa23.46■■□□□ 1.35
COL20A1-208ENST00000496810 SWAP70Q9UH65 585 aa23.46■■□□□ 1.35
COL20A1-208ENST00000496810 TAOK2Q9UL54 1235 aa23.46■■□□□ 1.35
COL20A1-208ENST00000496810 GLRX3O76003 335 aaKnown RBP23.45■■□□□ 1.34
COL20A1-208ENST00000496810 SIAH1Q8IUQ4 282 aa23.45■■□□□ 1.34
COL20A1-208ENST00000496810 SLAIN1Q8ND83 568 aa23.45■■□□□ 1.34
COL20A1-208ENST00000496810 EXOC6Q8TAG9 804 aa23.45■■□□□ 1.34
COL20A1-208ENST00000496810 PORCNQ9H237 461 aa23.45■■□□□ 1.34
COL20A1-208ENST00000496810 COL11A1P12107 1806 aaPredicted RBP23.45■■□□□ 1.34
COL20A1-208ENST00000496810 CNMDO75829 334 aa23.44■■□□□ 1.34
COL20A1-208ENST00000496810 INHAP05111 366 aa23.44■■□□□ 1.34
COL20A1-208ENST00000496810 CCL5P13501 91 aa23.44■■□□□ 1.34
COL20A1-208ENST00000496810 USP14P54578 494 aa23.44■■□□□ 1.34
COL20A1-208ENST00000496810 IRF5Q13568 498 aa23.44■■□□□ 1.34
COL20A1-208ENST00000496810 Q3C1V9 767 aa23.44■■□□□ 1.34
COL20A1-208ENST00000496810 TMEM179Q6ZVK1 233 aa23.44■■□□□ 1.34
COL20A1-208ENST00000496810 STK11IPQ8N1F8 1099 aa23.44■■□□□ 1.34
COL20A1-208ENST00000496810 COA7Q96BR5 231 aa23.44■■□□□ 1.34
COL20A1-208ENST00000496810 FSD1Q9BTV5 496 aa23.44■■□□□ 1.34
COL20A1-208ENST00000496810 RPAP3Q9H6T3 665 aaPredicted RBP23.44■■□□□ 1.34
COL20A1-208ENST00000496810 BIN2Q9UBW5 565 aaPredicted RBP23.44■■□□□ 1.34
COL20A1-208ENST00000496810 MYH4Q9Y623 1939 aa23.43■■□□□ 1.34
COL20A1-208ENST00000496810 ROBO3Q96MS0 1386 aa23.43■■□□□ 1.34
COL20A1-208ENST00000496810 ERC2O15083 957 aa23.43■■□□□ 1.34
COL20A1-208ENST00000496810 ERVK-9P63128 1117 aa23.43■■□□□ 1.34
COL20A1-208ENST00000496810 ERVK-24P63145 666 aa23.43■■□□□ 1.34
COL20A1-208ENST00000496810 UNC93B1Q9H1C4 597 aa23.43■■□□□ 1.34
COL20A1-208ENST00000496810 ARPP21Q9UBL0 812 aaPredicted RBP23.43■■□□□ 1.34
COL20A1-208ENST00000496810 GJD2Q9UKL4 321 aa23.43■■□□□ 1.34
COL20A1-208ENST00000496810 USP17L15C9J2P7 530 aa23.42■■□□□ 1.34
COL20A1-208ENST00000496810 USP17L13C9JLJ4 530 aa23.42■■□□□ 1.34
COL20A1-208ENST00000496810 USP17L11C9JVI0 530 aa23.42■■□□□ 1.34
COL20A1-208ENST00000496810 USP17L18D6R9N7 530 aa23.42■■□□□ 1.34
COL20A1-208ENST00000496810 USP17L22D6RA61 530 aa23.42■■□□□ 1.34
COL20A1-208ENST00000496810 USP17L17D6RBQ6 530 aa23.42■■□□□ 1.34
COL20A1-208ENST00000496810 USP17L19D6RCP7 530 aa23.42■■□□□ 1.34
COL20A1-208ENST00000496810 USP17L20D6RJB6 530 aa23.42■■□□□ 1.34
COL20A1-208ENST00000496810 ZFYP08048 801 aaPredicted RBP23.42■■□□□ 1.34
COL20A1-208ENST00000496810 ICA1Q05084 483 aa23.42■■□□□ 1.34
COL20A1-208ENST00000496810 USP17L24Q0WX57 530 aa23.42■■□□□ 1.34
COL20A1-208ENST00000496810 CATSPERGQ6ZRH7 1159 aa23.42■■□□□ 1.34
COL20A1-208ENST00000496810 GPRC5AQ8NFJ5 357 aa23.42■■□□□ 1.34
COL20A1-208ENST00000496810 GCC1Q96CN9 775 aa23.42■■□□□ 1.34
COL20A1-208ENST00000496810 DDRGK1Q96HY6 314 aa23.42■■□□□ 1.34
COL20A1-208ENST00000496810 SPDYE16A6NNV3 312 aaPredicted RBP23.41■■□□□ 1.34
COL20A1-208ENST00000496810 AMOTL1Q8IY63 956 aa23.41■■□□□ 1.34
COL20A1-208ENST00000496810 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.41■■□□□ 1.34
COL20A1-208ENST00000496810 LNPKQ9C0E8 428 aa23.41■■□□□ 1.34
COL20A1-208ENST00000496810 PDE1AP54750 535 aa23.4■■□□□ 1.34
COL20A1-208ENST00000496810 TRIM32Q13049 653 aa23.4■■□□□ 1.34
COL20A1-208ENST00000496810 SBK1Q52WX2 424 aa23.4■■□□□ 1.34
COL20A1-208ENST00000496810 ZMYM1Q5SVZ6 1142 aa23.4■■□□□ 1.34
COL20A1-208ENST00000496810 CCDC129Q6ZRS4 1044 aa23.4■■□□□ 1.34
COL20A1-208ENST00000496810 SPICE1Q8N0Z3 855 aa23.4■■□□□ 1.34
COL20A1-208ENST00000496810 PXYLP1Q8TE99 480 aa23.4■■□□□ 1.34
COL20A1-208ENST00000496810 RNF208Q9H0X6 261 aa23.4■■□□□ 1.34
COL20A1-208ENST00000496810 BTBD7Q9P203 1132 aa23.4■■□□□ 1.34
COL20A1-208ENST00000496810 MINDY4BA8MYZ0 360 aa23.39■■□□□ 1.33
COL20A1-208ENST00000496810 FOXP2O15409 715 aa23.39■■□□□ 1.33
COL20A1-208ENST00000496810 IGHDP01880 384 aa23.39■■□□□ 1.33
COL20A1-208ENST00000496810 STAP2Q9UGK3 403 aa23.39■■□□□ 1.33
COL20A1-208ENST00000496810 RASA1P20936 1047 aa23.38■■□□□ 1.33
COL20A1-208ENST00000496810 UBXN2AP68543 259 aa23.38■■□□□ 1.33
COL20A1-208ENST00000496810 B4GALNT3Q6L9W6 998 aa23.38■■□□□ 1.33
COL20A1-208ENST00000496810 SMC5Q8IY18 1101 aa23.38■■□□□ 1.33
COL20A1-208ENST00000496810 TRIB2Q92519 343 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms