RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 KRTAP4-2Q9BYR5 136 aa6.6□□□□□ -1.35
CD46-218ENST00000496723 NSUN3Q9H649 340 aaKnown RBP6.6□□□□□ -1.35
CD46-218ENST00000496723 CBX7O95931 251 aa6.59□□□□□ -1.35
CD46-218ENST00000496723 TMEM253P0C7T8 217 aa6.59□□□□□ -1.35
CD46-218ENST00000496723 TAF1CQ15572 869 aaPredicted RBP6.59□□□□□ -1.35
CD46-218ENST00000496723 PRAMEF13Q5VWM6 474 aa6.59□□□□□ -1.35
CD46-218ENST00000496723 TTBK2Q6IQ55 1244 aa6.59□□□□□ -1.35
CD46-218ENST00000496723 ABHD4Q8TB40 342 aa6.59□□□□□ -1.35
CD46-218ENST00000496723 DIRC2Q96SL1 478 aa6.59□□□□□ -1.35
CD46-218ENST00000496723 RAPGEFL1Q9UHV5 662 aa6.59□□□□□ -1.35
CD46-218ENST00000496723 ZNF16P17020 682 aaPredicted RBP6.58□□□□□ -1.36
CD46-218ENST00000496723 GRK4P32298 578 aa6.58□□□□□ -1.36
CD46-218ENST00000496723 ITGAEP38570 1179 aa6.58□□□□□ -1.36
CD46-218ENST00000496723 ETV3P41162 512 aa6.58□□□□□ -1.36
CD46-218ENST00000496723 TNK2Q07912 1038 aa6.58□□□□□ -1.36
CD46-218ENST00000496723 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.58□□□□□ -1.36
CD46-218ENST00000496723 TTC6Q86TZ1 520 aa6.58□□□□□ -1.36
CD46-218ENST00000496723 CRELD1Q96HD1 420 aa6.58□□□□□ -1.36
CD46-218ENST00000496723 EPB41L4BQ9H329 900 aa6.58□□□□□ -1.36
CD46-218ENST00000496723 DCP1AQ9NPI6 582 aaPredicted RBP6.58□□□□□ -1.36
CD46-218ENST00000496723 SLAMF8Q9P0V8 285 aa6.58□□□□□ -1.36
CD46-218ENST00000496723 ZSWIM5Q9P217 1185 aa6.58□□□□□ -1.36
CD46-218ENST00000496723 USP31Q70CQ4 1352 aa6.57□□□□□ -1.36
CD46-218ENST00000496723 KRTAP9-7A8MTY7 169 aa6.57□□□□□ -1.36
CD46-218ENST00000496723 GFRA2O00451 464 aa6.57□□□□□ -1.36
CD46-218ENST00000496723 MED14OSP0DP75 135 aa6.57□□□□□ -1.36
CD46-218ENST00000496723 MAP3K11Q16584 847 aa6.57□□□□□ -1.36
CD46-218ENST00000496723 LILRA6Q6PI73 481 aa6.57□□□□□ -1.36
CD46-218ENST00000496723 MRPL41Q8IXM3 137 aaKnown RBP6.57□□□□□ -1.36
CD46-218ENST00000496723 MYLIPQ8WY64 445 aa6.57□□□□□ -1.36
CD46-218ENST00000496723 BCL11AQ9H165 835 aa6.57□□□□□ -1.36
CD46-218ENST00000496723 TMEM59LQ9UK28 342 aa6.57□□□□□ -1.36
CD46-218ENST00000496723 LMNB1P20700 586 aa6.56□□□□□ -1.36
CD46-218ENST00000496723 GLDCP23378 1020 aa6.56□□□□□ -1.36
CD46-218ENST00000496723 ST13P50502 369 aaKnown RBP6.56□□□□□ -1.36
CD46-218ENST00000496723 SLC6A19Q695T7 634 aa6.56□□□□□ -1.36
CD46-218ENST00000496723 SLC26A8Q96RN1 970 aa6.56□□□□□ -1.36
CD46-218ENST00000496723 CD320Q9NPF0 282 aa6.56□□□□□ -1.36
CD46-218ENST00000496723 ESR1P03372 595 aa6.55□□□□□ -1.36
CD46-218ENST00000496723 SRFP11831 508 aa6.55□□□□□ -1.36
CD46-218ENST00000496723 KCNA10Q16322 511 aa6.55□□□□□ -1.36
CD46-218ENST00000496723 CDH24Q86UP0 819 aa6.55□□□□□ -1.36
CD46-218ENST00000496723 NOC4LQ9BVI4 516 aaKnown RBP6.55□□□□□ -1.36
CD46-218ENST00000496723 TRIT1Q9H3H1 467 aaKnown RBP6.55□□□□□ -1.36
CD46-218ENST00000496723 DNAJC25-GNG10A0A024R161 153 aa6.54□□□□□ -1.36
CD46-218ENST00000496723 TCAF2A6NFQ2 919 aa6.54□□□□□ -1.36
CD46-218ENST00000496723 NPIPB6E9PJ23 425 aa6.54□□□□□ -1.36
CD46-218ENST00000496723 HPXP02790 462 aa6.54□□□□□ -1.36
CD46-218ENST00000496723 CDK8P49336 464 aa6.54□□□□□ -1.36
CD46-218ENST00000496723 LIG3P49916 1009 aa6.54□□□□□ -1.36
CD46-218ENST00000496723 MRPL58Q14197 206 aaKnown RBP6.54□□□□□ -1.36
CD46-218ENST00000496723 RALGPS1Q5JS13 557 aa6.54□□□□□ -1.36
CD46-218ENST00000496723 CIAPIN1Q6FI81 312 aa6.54□□□□□ -1.36
CD46-218ENST00000496723 ATG14Q6ZNE5 492 aa6.54□□□□□ -1.36
CD46-218ENST00000496723 TTLL10Q6ZVT0 673 aa6.54□□□□□ -1.36
CD46-218ENST00000496723 XAGE3Q8WTP9 111 aa6.54□□□□□ -1.36
CD46-218ENST00000496723 RBM47A0AV96 593 aaKnown RBP6.53□□□□□ -1.36
CD46-218ENST00000496723 PDE4BQ07343 736 aa6.53□□□□□ -1.36
CD46-218ENST00000496723 GAB4Q2WGN9 574 aa6.53□□□□□ -1.36
CD46-218ENST00000496723 AGMOQ6ZNB7 445 aa6.53□□□□□ -1.36
CD46-218ENST00000496723 MCATQ8IVS2 390 aaKnown RBP6.53□□□□□ -1.36
CD46-218ENST00000496723 TMEM87BQ96K49 555 aa6.53□□□□□ -1.36
CD46-218ENST00000496723 KRTAP4-11Q9BYQ6 195 aa6.53□□□□□ -1.36
CD46-218ENST00000496723 DUSP15Q9H1R2 295 aaPredicted RBP6.53□□□□□ -1.36
CD46-218ENST00000496723 TJP2Q9UDY2 1190 aa6.53□□□□□ -1.36
CD46-218ENST00000496723 ADAM30Q9UKF2 790 aa6.53□□□□□ -1.36
CD46-218ENST00000496723 F6X3S4 739 aa6.52□□□□□ -1.37
CD46-218ENST00000496723 ETV2O00321 342 aaPredicted RBP6.52□□□□□ -1.37
CD46-218ENST00000496723 PGRP06401 933 aa6.52□□□□□ -1.37
CD46-218ENST00000496723 RLBP1P12271 317 aa6.52□□□□□ -1.37
CD46-218ENST00000496723 HK2P52789 917 aa6.52□□□□□ -1.37
CD46-218ENST00000496723 TSNAXIP1Q2TAA8 658 aa6.52□□□□□ -1.37
CD46-218ENST00000496723 CREG2Q8IUH2 290 aa6.52□□□□□ -1.37
CD46-218ENST00000496723 KCNN1Q92952 543 aa6.52□□□□□ -1.37
CD46-218ENST00000496723 MIR1-1HGQ9H1L0 117 aa6.52□□□□□ -1.37
CD46-218ENST00000496723 ADAMTS10Q9H324 1103 aa6.52□□□□□ -1.37
CD46-218ENST00000496723 GPATCH2Q9NW75 528 aa6.52□□□□□ -1.37
CD46-218ENST00000496723 CEP131Q9UPN4 1083 aa6.52□□□□□ -1.37
CD46-218ENST00000496723 TLR6Q9Y2C9 796 aa6.52□□□□□ -1.37
CD46-218ENST00000496723 CCDC9Q9Y3X0 531 aaKnown RBP6.52□□□□□ -1.37
CD46-218ENST00000496723 PCDHB5Q9Y5E4 795 aa6.52□□□□□ -1.37
CD46-218ENST00000496723 PRRG2O14669 202 aa6.51□□□□□ -1.37
CD46-218ENST00000496723 TFE3P19532 575 aaPredicted RBP6.51□□□□□ -1.37
CD46-218ENST00000496723 TPP2P29144 1249 aaPredicted RBP6.51□□□□□ -1.37
CD46-218ENST00000496723 SEPT6Q14141 434 aa6.51□□□□□ -1.37
CD46-218ENST00000496723 DIEXFQ68CQ4 756 aaKnown RBP6.51□□□□□ -1.37
CD46-218ENST00000496723 LILRA2Q8N149 483 aa6.51□□□□□ -1.37
CD46-218ENST00000496723 RGS22Q8NE09 1264 aa6.51□□□□□ -1.37
CD46-218ENST00000496723 PDZD8Q8NEN9 1154 aa6.51□□□□□ -1.37
CD46-218ENST00000496723 DNAJB8Q8NHS0 232 aa6.51□□□□□ -1.37
CD46-218ENST00000496723 Q96M66 194 aa6.51□□□□□ -1.37
CD46-218ENST00000496723 GPR62Q9BZJ7 368 aa6.51□□□□□ -1.37
CD46-218ENST00000496723 SMG5Q9UPR3 1016 aaKnown RBP6.51□□□□□ -1.37
CD46-218ENST00000496723 ERVFC1P60507 584 aa6.5□□□□□ -1.37
CD46-218ENST00000496723 IRF2BP1Q8IU81 584 aa6.5□□□□□ -1.37
CD46-218ENST00000496723 OXR1Q8N573 874 aa6.5□□□□□ -1.37
CD46-218ENST00000496723 PHC3Q8NDX5 983 aa6.5□□□□□ -1.37
CD46-218ENST00000496723 DPH2Q9BQC3 489 aaPredicted RBP6.5□□□□□ -1.37
CD46-218ENST00000496723 KCNH3Q9ULD8 1083 aa6.5□□□□□ -1.37
CD46-218ENST00000496723 NCANO14594 1321 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms