RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 C12orf42Q96LP6 360 aa9.06□□□□□ -0.96
CDHR3-214ENST00000496633 MCOLN1Q9GZU1 580 aa9.06□□□□□ -0.96
CDHR3-214ENST00000496633 DNAJC18Q9H819 358 aa9.06□□□□□ -0.96
CDHR3-214ENST00000496633 TRIM17Q9Y577 477 aa9.06□□□□□ -0.96
CDHR3-214ENST00000496633 ROBO3Q96MS0 1386 aa9.06□□□□□ -0.96
CDHR3-214ENST00000496633 DDX60LQ5H9U9 1706 aaKnown RBP9.05□□□□□ -0.96
CDHR3-214ENST00000496633 MYH8P13535 1937 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 FAM196BA6NMK8 535 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 GSG1L2A8MUP6 293 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 USP17L15C9J2P7 530 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 USP17L13C9JLJ4 530 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 USP17L11C9JVI0 530 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 USP17L18D6R9N7 530 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 USP17L22D6RA61 530 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 USP17L17D6RBQ6 530 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 USP17L19D6RCP7 530 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 USP17L20D6RJB6 530 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 IGHDP01880 384 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 SHMT1P34896 483 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 CDK8P49336 464 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 HMGCS2P54868 508 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 CCNA1P78396 465 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 USP17L24Q0WX57 530 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 MTMR2Q13614 643 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 FAM110CQ1W6H9 321 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 TSHZ3Q63HK5 1081 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 GPAT2Q6NUI2 795 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 CTR9Q6PD62 1173 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 CENPQQ7L2Z9 268 aaPredicted RBP9.05□□□□□ -0.96
CDHR3-214ENST00000496633 PLEKHM2Q8IWE5 1019 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 CCAR1Q8IX12 1150 aaKnown RBP9.05□□□□□ -0.96
CDHR3-214ENST00000496633 RILPL2Q969X0 211 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 GOPCQ9HD26 462 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 DIAPH3Q9NSV4 1193 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 HOXC10Q9NYD6 342 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 PTPRFP10586 1907 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 PHIPQ8WWQ0 1821 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 ZMYM6O95789 1325 aa9.05□□□□□ -0.96
CDHR3-214ENST00000496633 LOC285556D6RIA3 1793 aa9.04□□□□□ -0.96
CDHR3-214ENST00000496633 SIPA1L1O43166 1804 aa9.04□□□□□ -0.96
CDHR3-214ENST00000496633 MINDY4BA8MYZ0 360 aa9.04□□□□□ -0.96
CDHR3-214ENST00000496633 GDF11O95390 407 aa9.04□□□□□ -0.96
CDHR3-214ENST00000496633 BCRP11274 1271 aa9.04□□□□□ -0.96
CDHR3-214ENST00000496633 ICA1Q05084 483 aa9.04□□□□□ -0.96
CDHR3-214ENST00000496633 MOGSQ13724 837 aa9.04□□□□□ -0.96
CDHR3-214ENST00000496633 ALX1Q15699 326 aa9.04□□□□□ -0.96
CDHR3-214ENST00000496633 ERICH6BQ5W0A0 696 aa9.04□□□□□ -0.96
CDHR3-214ENST00000496633 IFNL3Q8IZI9 196 aa9.04□□□□□ -0.96
CDHR3-214ENST00000496633 MB21D1Q8N884 522 aa9.04□□□□□ -0.96
CDHR3-214ENST00000496633 COA7Q96BR5 231 aa9.04□□□□□ -0.96
CDHR3-214ENST00000496633 RNF41Q9H4P4 317 aaPredicted RBP9.04□□□□□ -0.96
CDHR3-214ENST00000496633 CTNNA3Q9UI47 895 aa9.04□□□□□ -0.96
CDHR3-214ENST00000496633 MYPNQ86TC9 1320 aa9.04□□□□□ -0.96
CDHR3-214ENST00000496633 WDR46O15213 610 aaKnown RBP9.03□□□□□ -0.96
CDHR3-214ENST00000496633 PRKAB2O43741 272 aa9.03□□□□□ -0.96
CDHR3-214ENST00000496633 FMNL1O95466 1100 aaPredicted RBP9.03□□□□□ -0.96
CDHR3-214ENST00000496633 SDSP20132 328 aa9.03□□□□□ -0.96
CDHR3-214ENST00000496633 PSMC4P43686 418 aa9.03□□□□□ -0.96
CDHR3-214ENST00000496633 SLC4A8Q2Y0W8 1093 aa9.03□□□□□ -0.96
CDHR3-214ENST00000496633 CCDC178Q5BJE1 867 aa9.03□□□□□ -0.96
CDHR3-214ENST00000496633 LBX2Q6XYB7 198 aa9.03□□□□□ -0.96
CDHR3-214ENST00000496633 OTOP1Q7RTM1 612 aa9.03□□□□□ -0.96
CDHR3-214ENST00000496633 OTUD7AQ8TE49 926 aaPredicted RBP9.03□□□□□ -0.96
CDHR3-214ENST00000496633 SPOCK2Q92563 424 aa9.03□□□□□ -0.96
CDHR3-214ENST00000496633 ASCC2Q9H1I8 757 aaPredicted RBP9.03□□□□□ -0.96
CDHR3-214ENST00000496633 MORF4L1Q9UBU8 362 aa9.03□□□□□ -0.96
CDHR3-214ENST00000496633 PTPN22Q9Y2R2 807 aa9.03□□□□□ -0.96
CDHR3-214ENST00000496633 TMX2Q9Y320 296 aa9.03□□□□□ -0.96
CDHR3-214ENST00000496633 CCDC171Q6TFL3 1326 aa9.03□□□□□ -0.96
CDHR3-214ENST00000496633 RAD50Q92878 1312 aa9.03□□□□□ -0.96
CDHR3-214ENST00000496633 ADGRA2Q96PE1 1338 aa9.03□□□□□ -0.96
CDHR3-214ENST00000496633 BAZ2AQ9UIF9 1905 aaKnown RBP9.02□□□□□ -0.97
CDHR3-214ENST00000496633 CCDC85CA6NKD9 419 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 M0R2C6 588 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 TNPO2O14787 897 aaKnown RBP9.02□□□□□ -0.97
CDHR3-214ENST00000496633 TSPY3P0CV98 308 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 TSPY8P0CW00 308 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 FDX1P10109 184 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 CYP2C8P10632 490 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 MAPK4P31152 587 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 COPB2P35606 906 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 PPARAQ07869 468 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 RRP1BQ14684 758 aaKnown RBP9.02□□□□□ -0.97
CDHR3-214ENST00000496633 COG2Q14746 738 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 SEPT2Q15019 361 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 TRMT44Q8IYL2 757 aaKnown RBP9.02□□□□□ -0.97
CDHR3-214ENST00000496633 GPRC5AQ8NFJ5 357 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 CD99L2Q8TCZ2 262 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 RAET1EQ8TD07 263 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 SOCS4Q8WXH5 440 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 TRIM47Q96LD4 638 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 TMEM106CQ9BVX2 250 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 CWC22Q9HCG8 908 aaKnown RBP9.02□□□□□ -0.97
CDHR3-214ENST00000496633 NYAP2Q9P242 653 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 SRRDQ9UH36 339 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 CPA4Q9UI42 421 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 ANAPC4Q9UJX5 808 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 RABGAP1Q9Y3P9 1069 aa9.02□□□□□ -0.97
CDHR3-214ENST00000496633 TTLL1O95922 423 aa9.01□□□□□ -0.97
CDHR3-214ENST00000496633 VCAM1P19320 739 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms