RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 RILPL2Q969X0 211 aa19.3■□□□□ 0.68
DNMT3A-215ENST00000496570 C12orf42Q96LP6 360 aa19.3■□□□□ 0.68
DNMT3A-215ENST00000496570 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.3■□□□□ 0.68
DNMT3A-215ENST00000496570 KIAA1683Q9H0B3 1180 aa19.3■□□□□ 0.68
DNMT3A-215ENST00000496570 ASCC2Q9H1I8 757 aaPredicted RBP19.3■□□□□ 0.68
DNMT3A-215ENST00000496570 TRIM17Q9Y577 477 aa19.3■□□□□ 0.68
DNMT3A-215ENST00000496570 SDSP20132 328 aa19.29■□□□□ 0.68
DNMT3A-215ENST00000496570 RASA1P20936 1047 aa19.29■□□□□ 0.68
DNMT3A-215ENST00000496570 HOXA7P31268 230 aaPredicted RBP19.29■□□□□ 0.68
DNMT3A-215ENST00000496570 TDO2P48775 406 aa19.29■□□□□ 0.68
DNMT3A-215ENST00000496570 USP17L2Q6R6M4 530 aa19.29■□□□□ 0.68
DNMT3A-215ENST00000496570 POTEEQ6S8J3 1075 aa19.29■□□□□ 0.68
DNMT3A-215ENST00000496570 TMEM179Q6ZVK1 233 aa19.29■□□□□ 0.68
DNMT3A-215ENST00000496570 MINDY4BA8MYZ0 360 aa19.28■□□□□ 0.68
DNMT3A-215ENST00000496570 MPHOSPH10O00566 681 aaKnown RBP19.28■□□□□ 0.68
DNMT3A-215ENST00000496570 CAPN15O75808 1086 aa19.28■□□□□ 0.68
DNMT3A-215ENST00000496570 APPP05067 770 aa19.28■□□□□ 0.68
DNMT3A-215ENST00000496570 MCMDC2Q4G0Z9 681 aa19.28■□□□□ 0.68
DNMT3A-215ENST00000496570 TTC22Q5TAA0 569 aa19.28■□□□□ 0.68
DNMT3A-215ENST00000496570 FBXO46Q6PJ61 603 aaPredicted RBP19.28■□□□□ 0.68
DNMT3A-215ENST00000496570 CCDC17Q96LX7 622 aa19.28■□□□□ 0.68
DNMT3A-215ENST00000496570 EFCC1Q9HA90 598 aa19.28■□□□□ 0.68
DNMT3A-215ENST00000496570 TMOD4Q9NZQ9 345 aa19.28■□□□□ 0.68
DNMT3A-215ENST00000496570 HPS5Q9UPZ3 1129 aa19.28■□□□□ 0.68
DNMT3A-215ENST00000496570 TACC3Q9Y6A5 838 aa19.28■□□□□ 0.68
DNMT3A-215ENST00000496570 ZYXQ15942 572 aaKnown RBP19.27■□□□□ 0.68
DNMT3A-215ENST00000496570 KIAA1755Q5JYT7 1200 aa19.27■□□□□ 0.68
DNMT3A-215ENST00000496570 STK11IPQ8N1F8 1099 aa19.27■□□□□ 0.68
DNMT3A-215ENST00000496570 TRIM47Q96LD4 638 aa19.27■□□□□ 0.68
DNMT3A-215ENST00000496570 PTPN22Q9Y2R2 807 aa19.27■□□□□ 0.68
DNMT3A-215ENST00000496570 PPARAQ07869 468 aa19.26■□□□□ 0.67
DNMT3A-215ENST00000496570 P2RX7Q99572 595 aaKnown RBP19.26■□□□□ 0.67
DNMT3A-215ENST00000496570 NACAP1Q9BZK3 213 aa19.26■□□□□ 0.67
DNMT3A-215ENST00000496570 PNMA3Q9UL41 463 aa19.26■□□□□ 0.67
DNMT3A-215ENST00000496570 MGAMO43451 1857 aa19.26■□□□□ 0.67
DNMT3A-215ENST00000496570 CENPFP49454 3210 aa19.25■□□□□ 0.67
DNMT3A-215ENST00000496570 VCAM1P19320 739 aa19.25■□□□□ 0.67
DNMT3A-215ENST00000496570 OSBPP22059 807 aa19.25■□□□□ 0.67
DNMT3A-215ENST00000496570 USP14P54578 494 aa19.25■□□□□ 0.67
DNMT3A-215ENST00000496570 PABPC4Q13310 644 aaKnown RBP eCLIP19.25■□□□□ 0.67
DNMT3A-215ENST00000496570 ALX1Q15699 326 aa19.25■□□□□ 0.67
DNMT3A-215ENST00000496570 ANKRD13CQ8N6S4 541 aa19.25■□□□□ 0.67
DNMT3A-215ENST00000496570 SMCR8Q8TEV9 937 aaPredicted RBP19.25■□□□□ 0.67
DNMT3A-215ENST00000496570 FEZ1Q99689 392 aa19.25■□□□□ 0.67
DNMT3A-215ENST00000496570 NAPBQ9H115 298 aa19.25■□□□□ 0.67
DNMT3A-215ENST00000496570 CCDC171Q6TFL3 1326 aa19.25■□□□□ 0.67
DNMT3A-215ENST00000496570 IGKV6D-41A0A0C4DH26 115 aa19.24■□□□□ 0.67
DNMT3A-215ENST00000496570 PEX10O60683 326 aa19.24■□□□□ 0.67
DNMT3A-215ENST00000496570 PRDM1O75626 825 aa19.24■□□□□ 0.67
DNMT3A-215ENST00000496570 ECM2O94769 699 aaPredicted RBP19.24■□□□□ 0.67
DNMT3A-215ENST00000496570 HSPD1P10809 573 aaKnown RBP19.24■□□□□ 0.67
DNMT3A-215ENST00000496570 PSMC4P43686 418 aa19.24■□□□□ 0.67
DNMT3A-215ENST00000496570 ICA1Q05084 483 aa19.24■□□□□ 0.67
DNMT3A-215ENST00000496570 FAM110CQ1W6H9 321 aa19.24■□□□□ 0.67
DNMT3A-215ENST00000496570 IL25Q9H293 177 aa19.24■□□□□ 0.67
DNMT3A-215ENST00000496570 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.24■□□□□ 0.67
DNMT3A-215ENST00000496570 TMX2Q9Y320 296 aa19.24■□□□□ 0.67
DNMT3A-215ENST00000496570 RLFQ13129 1914 aa19.23■□□□□ 0.67
DNMT3A-215ENST00000496570 FGAP02671 866 aa19.23■□□□□ 0.67
DNMT3A-215ENST00000496570 EEF2P13639 858 aaKnown RBP19.23■□□□□ 0.67
DNMT3A-215ENST00000496570 HERVK_113P62684 666 aa19.23■□□□□ 0.67
DNMT3A-215ENST00000496570 CATSPERGQ6ZRH7 1159 aa19.23■□□□□ 0.67
DNMT3A-215ENST00000496570 TXNRD2Q9NNW7 524 aa19.23■□□□□ 0.67
DNMT3A-215ENST00000496570 INCENPQ9NQS7 918 aa19.23■□□□□ 0.67
DNMT3A-215ENST00000496570 MORF4L1Q9UBU8 362 aa19.23■□□□□ 0.67
DNMT3A-215ENST00000496570 ANAPC4Q9UJX5 808 aa19.23■□□□□ 0.67
DNMT3A-215ENST00000496570 CCDC85CA6NKD9 419 aa19.22■□□□□ 0.67
DNMT3A-215ENST00000496570 GCLCP48506 637 aaPredicted RBP19.22■□□□□ 0.67
DNMT3A-215ENST00000496570 IRX3P78415 501 aaPredicted RBP19.22■□□□□ 0.67
DNMT3A-215ENST00000496570 CTDSPL2Q05D32 466 aa19.22■□□□□ 0.67
DNMT3A-215ENST00000496570 KIF22Q14807 665 aa19.22■□□□□ 0.67
DNMT3A-215ENST00000496570 CWC27Q6UX04 472 aaKnown RBP19.22■□□□□ 0.67
DNMT3A-215ENST00000496570 SKAP1Q86WV1 359 aa19.22■□□□□ 0.67
DNMT3A-215ENST00000496570 KANSL2Q9H9L4 492 aa19.22■□□□□ 0.67
DNMT3A-215ENST00000496570 MKNK2Q9HBH9 465 aa19.22■□□□□ 0.67
DNMT3A-215ENST00000496570 RBPJLQ9UBG7 517 aa19.22■□□□□ 0.67
DNMT3A-215ENST00000496570 PTCH2Q9Y6C5 1203 aa19.22■□□□□ 0.67
DNMT3A-215ENST00000496570 ZMYM6O95789 1325 aa19.22■□□□□ 0.67
DNMT3A-215ENST00000496570 PLIN4Q96Q06 1357 aa19.21■□□□□ 0.67
DNMT3A-215ENST00000496570 USP17L15C9J2P7 530 aa19.21■□□□□ 0.67
DNMT3A-215ENST00000496570 USP17L13C9JLJ4 530 aa19.21■□□□□ 0.67
DNMT3A-215ENST00000496570 USP17L11C9JVI0 530 aa19.21■□□□□ 0.67
DNMT3A-215ENST00000496570 USP17L18D6R9N7 530 aa19.21■□□□□ 0.67
DNMT3A-215ENST00000496570 USP17L22D6RA61 530 aa19.21■□□□□ 0.67
DNMT3A-215ENST00000496570 USP17L17D6RBQ6 530 aa19.21■□□□□ 0.67
DNMT3A-215ENST00000496570 USP17L19D6RCP7 530 aa19.21■□□□□ 0.67
DNMT3A-215ENST00000496570 USP17L20D6RJB6 530 aa19.21■□□□□ 0.67
DNMT3A-215ENST00000496570 CNMDO75829 334 aa19.21■□□□□ 0.67
DNMT3A-215ENST00000496570 GNRH1P01148 92 aa19.21■□□□□ 0.67
DNMT3A-215ENST00000496570 FGRP09769 529 aa19.21■□□□□ 0.67
DNMT3A-215ENST00000496570 USP17L24Q0WX57 530 aa19.21■□□□□ 0.67
DNMT3A-215ENST00000496570 NBPF3Q9H094 633 aa19.21■□□□□ 0.67
DNMT3A-215ENST00000496570 RPAP3Q9H6T3 665 aaPredicted RBP19.21■□□□□ 0.67
DNMT3A-215ENST00000496570 ARHGEF6Q15052 776 aa19.2■□□□□ 0.66
DNMT3A-215ENST00000496570 CENPQQ7L2Z9 268 aaPredicted RBP19.2■□□□□ 0.66
DNMT3A-215ENST00000496570 VCPKMTQ9H867 229 aa19.2■□□□□ 0.66
DNMT3A-215ENST00000496570 ARHGEF10LQ9HCE6 1279 aa19.2■□□□□ 0.66
DNMT3A-215ENST00000496570 DIAPH3Q9NSV4 1193 aa19.2■□□□□ 0.66
DNMT3A-215ENST00000496570 SRRDQ9UH36 339 aa19.2■□□□□ 0.66
DNMT3A-215ENST00000496570 PARP14Q460N5 1801 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms