RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 CRISPLD2Q9H0B8 497 aa17.41■□□□□ 0.38
CXCL12-208ENST00000496375 DCTPP1Q9H773 170 aa17.41■□□□□ 0.38
CXCL12-208ENST00000496375 ZNF532Q9HCE3 1301 aa17.41■□□□□ 0.38
CXCL12-208ENST00000496375 TRIOBPQ9H2D6 2365 aa17.4■□□□□ 0.38
CXCL12-208ENST00000496375 SHMT1P34896 483 aa17.4■□□□□ 0.38
CXCL12-208ENST00000496375 Q3C1V9 767 aa17.4■□□□□ 0.38
CXCL12-208ENST00000496375 SOCS4Q8WXH5 440 aa17.4■□□□□ 0.38
CXCL12-208ENST00000496375 TRIB2Q92519 343 aa17.4■□□□□ 0.38
CXCL12-208ENST00000496375 EDC3Q96F86 508 aaKnown RBP17.4■□□□□ 0.38
CXCL12-208ENST00000496375 NUDT12Q9BQG2 462 aa17.4■□□□□ 0.38
CXCL12-208ENST00000496375 CRNKL1Q9BZJ0 848 aaKnown RBP17.4■□□□□ 0.38
CXCL12-208ENST00000496375 CABP5Q9NP86 173 aa17.4■□□□□ 0.38
CXCL12-208ENST00000496375 NR2E3Q9Y5X4 410 aa17.4■□□□□ 0.38
CXCL12-208ENST00000496375 RANBP2P49792 3224 aaKnown RBP17.4■□□□□ 0.38
CXCL12-208ENST00000496375 TCRBV5S4A2TA0A5A2 114 aa17.39■□□□□ 0.37
CXCL12-208ENST00000496375 USP17L15C9J2P7 530 aa17.39■□□□□ 0.37
CXCL12-208ENST00000496375 USP17L13C9JLJ4 530 aa17.39■□□□□ 0.37
CXCL12-208ENST00000496375 USP17L11C9JVI0 530 aa17.39■□□□□ 0.37
CXCL12-208ENST00000496375 USP17L18D6R9N7 530 aa17.39■□□□□ 0.37
CXCL12-208ENST00000496375 USP17L22D6RA61 530 aa17.39■□□□□ 0.37
CXCL12-208ENST00000496375 USP17L17D6RBQ6 530 aa17.39■□□□□ 0.37
CXCL12-208ENST00000496375 USP17L19D6RCP7 530 aa17.39■□□□□ 0.37
CXCL12-208ENST00000496375 USP17L20D6RJB6 530 aa17.39■□□□□ 0.37
CXCL12-208ENST00000496375 MAPK4P31152 587 aa17.39■□□□□ 0.37
CXCL12-208ENST00000496375 USP14P54578 494 aa17.39■□□□□ 0.37
CXCL12-208ENST00000496375 USP17L24Q0WX57 530 aa17.39■□□□□ 0.37
CXCL12-208ENST00000496375 HDAC1Q13547 482 aaPredicted RBP17.39■□□□□ 0.37
CXCL12-208ENST00000496375 POTEEQ6S8J3 1075 aa17.39■□□□□ 0.37
CXCL12-208ENST00000496375 CCAR1Q8IX12 1150 aaKnown RBP17.39■□□□□ 0.37
CXCL12-208ENST00000496375 EXOC6Q8TAG9 804 aa17.39■□□□□ 0.37
CXCL12-208ENST00000496375 ACER1Q8TDN7 264 aa17.39■□□□□ 0.37
CXCL12-208ENST00000496375 KIAA1683Q9H0B3 1180 aa17.39■□□□□ 0.37
CXCL12-208ENST00000496375 PORCNQ9H237 461 aa17.39■□□□□ 0.37
CXCL12-208ENST00000496375 HMX1Q9NP08 348 aaPredicted RBP17.39■□□□□ 0.37
CXCL12-208ENST00000496375 MCM9Q9NXL9 1143 aa17.39■□□□□ 0.37
CXCL12-208ENST00000496375 RPTORQ8N122 1335 aa17.39■□□□□ 0.37
CXCL12-208ENST00000496375 EVX2Q03828 476 aa17.38■□□□□ 0.37
CXCL12-208ENST00000496375 GABPAQ06546 454 aa17.38■□□□□ 0.37
CXCL12-208ENST00000496375 LCORLQ8N3X6 602 aa17.38■□□□□ 0.37
CXCL12-208ENST00000496375 DIS3LQ8TF46 1054 aaKnown RBP17.38■□□□□ 0.37
CXCL12-208ENST00000496375 SDR42E1Q8WUS8 393 aa17.38■□□□□ 0.37
CXCL12-208ENST00000496375 PAWRQ96IZ0 340 aaKnown RBP17.38■□□□□ 0.37
CXCL12-208ENST00000496375 BOLA2Q9H3K6 86 aa17.38■□□□□ 0.37
CXCL12-208ENST00000496375 EVI5O60447 810 aa17.37■□□□□ 0.37
CXCL12-208ENST00000496375 XRCC5P13010 732 aaKnown RBP17.37■□□□□ 0.37
CXCL12-208ENST00000496375 VCAM1P19320 739 aa17.37■□□□□ 0.37
CXCL12-208ENST00000496375 GUCY1A2P33402 732 aa17.37■□□□□ 0.37
CXCL12-208ENST00000496375 SEPT2Q15019 361 aa17.37■□□□□ 0.37
CXCL12-208ENST00000496375 CATSPERGQ6ZRH7 1159 aa17.37■□□□□ 0.37
CXCL12-208ENST00000496375 GPR142Q7Z601 462 aa17.37■□□□□ 0.37
CXCL12-208ENST00000496375 NECAB2Q7Z6G3 386 aa17.37■□□□□ 0.37
CXCL12-208ENST00000496375 PAG1Q9NWQ8 432 aa17.37■□□□□ 0.37
CXCL12-208ENST00000496375 RBM27Q9P2N5 1060 aaKnown RBP17.37■□□□□ 0.37
CXCL12-208ENST00000496375 CNMDO75829 334 aa17.36■□□□□ 0.37
CXCL12-208ENST00000496375 PRKAR2AP13861 404 aaKnown RBP17.36■□□□□ 0.37
CXCL12-208ENST00000496375 ZKSCAN1P17029 563 aaPredicted RBP17.36■□□□□ 0.37
CXCL12-208ENST00000496375 RGS2P41220 211 aa17.36■□□□□ 0.37
CXCL12-208ENST00000496375 MAP3K21Q5TCX8 1036 aa17.36■□□□□ 0.37
CXCL12-208ENST00000496375 PLEKHH3Q7Z736 793 aa17.36■□□□□ 0.37
CXCL12-208ENST00000496375 ANKLE1Q8NAG6 615 aa17.36■□□□□ 0.37
CXCL12-208ENST00000496375 USP6NLQ92738 828 aa17.36■□□□□ 0.37
CXCL12-208ENST00000496375 ARMT1Q9H993 441 aa17.36■□□□□ 0.37
CXCL12-208ENST00000496375 CWC22Q9HCG8 908 aaKnown RBP17.36■□□□□ 0.37
CXCL12-208ENST00000496375 DCP1AQ9NPI6 582 aaPredicted RBP17.36■□□□□ 0.37
CXCL12-208ENST00000496375 RABGAP1Q9Y3P9 1069 aa17.36■□□□□ 0.37
CXCL12-208ENST00000496375 ALPK3Q96L96 1907 aa17.36■□□□□ 0.37
CXCL12-208ENST00000496375 SZT2Q5T011 3432 aa17.36■□□□□ 0.37
CXCL12-208ENST00000496375 MPHOSPH10O00566 681 aaKnown RBP17.35■□□□□ 0.37
CXCL12-208ENST00000496375 CYP2D6P10635 497 aa17.35■□□□□ 0.37
CXCL12-208ENST00000496375 ATP5JP18859 108 aa17.35■□□□□ 0.37
CXCL12-208ENST00000496375 ADD2P35612 726 aa17.35■□□□□ 0.37
CXCL12-208ENST00000496375 SLFNL1Q499Z3 407 aa17.35■□□□□ 0.37
CXCL12-208ENST00000496375 MORN1Q5T089 497 aa17.35■□□□□ 0.37
CXCL12-208ENST00000496375 TRMT44Q8IYL2 757 aaKnown RBP17.35■□□□□ 0.37
CXCL12-208ENST00000496375 LRRCC1Q9C099 1032 aa17.35■□□□□ 0.37
CXCL12-208ENST00000496375 RPAP3Q9H6T3 665 aaPredicted RBP17.35■□□□□ 0.37
CXCL12-208ENST00000496375 PRKAB2O43741 272 aa17.34■□□□□ 0.37
CXCL12-208ENST00000496375 MBD4O95243 580 aa17.34■□□□□ 0.37
CXCL12-208ENST00000496375 CCNA1P78396 465 aa17.34■□□□□ 0.37
CXCL12-208ENST00000496375 CCL14Q16627 93 aa17.34■□□□□ 0.37
CXCL12-208ENST00000496375 SLC44A5Q8NCS7 719 aa17.34■□□□□ 0.37
CXCL12-208ENST00000496375 APBA2Q99767 749 aa17.34■□□□□ 0.37
CXCL12-208ENST00000496375 HAUS7Q99871 368 aa17.34■□□□□ 0.37
CXCL12-208ENST00000496375 MYH8P13535 1937 aa17.33■□□□□ 0.37
CXCL12-208ENST00000496375 BAZ2AQ9UIF9 1905 aaKnown RBP17.33■□□□□ 0.37
CXCL12-208ENST00000496375 A0A1W2PRG0 241 aa17.33■□□□□ 0.36
CXCL12-208ENST00000496375 CACNB2Q08289 660 aaPredicted RBP17.33■□□□□ 0.36
CXCL12-208ENST00000496375 MAP2K5Q13163 448 aa17.33■□□□□ 0.36
CXCL12-208ENST00000496375 WDR78Q5VTH9 848 aa17.33■□□□□ 0.36
CXCL12-208ENST00000496375 LBX2Q6XYB7 198 aa17.33■□□□□ 0.36
CXCL12-208ENST00000496375 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.33■□□□□ 0.36
CXCL12-208ENST00000496375 NBPF3Q9H094 633 aa17.33■□□□□ 0.36
CXCL12-208ENST00000496375 PRO3102Q9H379 93 aa17.33■□□□□ 0.36
CXCL12-208ENST00000496375 BTBD7Q9P203 1132 aa17.33■□□□□ 0.36
CXCL12-208ENST00000496375 SWAP70Q9UH65 585 aa17.33■□□□□ 0.36
CXCL12-208ENST00000496375 OGDHLQ9ULD0 1010 aa17.33■□□□□ 0.36
CXCL12-208ENST00000496375 MYH7P12883 1935 aa17.33■□□□□ 0.36
CXCL12-208ENST00000496375 SPDYE16A6NNV3 312 aaPredicted RBP17.32■□□□□ 0.36
CXCL12-208ENST00000496375 GLRX3O76003 335 aaKnown RBP17.32■□□□□ 0.36
CXCL12-208ENST00000496375 CHGBP05060 677 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms