RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 VPS53Q5VIR6 699 aa21.03■□□□□ 0.96
RHBDD3-207ENST00000496342 IFNL3Q8IZI9 196 aa21.03■□□□□ 0.96
RHBDD3-207ENST00000496342 EFCC1Q9HA90 598 aa21.03■□□□□ 0.96
RHBDD3-207ENST00000496342 TMOD4Q9NZQ9 345 aa21.03■□□□□ 0.96
RHBDD3-207ENST00000496342 SLC45A1Q9Y2W3 748 aa21.03■□□□□ 0.96
RHBDD3-207ENST00000496342 ROBO3Q96MS0 1386 aa21.02■□□□□ 0.96
RHBDD3-207ENST00000496342 GNAT2P19087 354 aa21.02■□□□□ 0.96
RHBDD3-207ENST00000496342 SBK1Q52WX2 424 aa21.02■□□□□ 0.96
RHBDD3-207ENST00000496342 FBXO46Q6PJ61 603 aaPredicted RBP21.02■□□□□ 0.96
RHBDD3-207ENST00000496342 ZNF589Q86UQ0 364 aaPredicted RBP21.02■□□□□ 0.96
RHBDD3-207ENST00000496342 SMCR8Q8TEV9 937 aaPredicted RBP21.02■□□□□ 0.96
RHBDD3-207ENST00000496342 ASCC2Q9H1I8 757 aaPredicted RBP21.02■□□□□ 0.96
RHBDD3-207ENST00000496342 RLFQ13129 1914 aa21.02■□□□□ 0.95
RHBDD3-207ENST00000496342 A0A1W2PRG0 241 aa21.01■□□□□ 0.95
RHBDD3-207ENST00000496342 PATL2C9JE40 543 aaKnown RBP21.01■□□□□ 0.95
RHBDD3-207ENST00000496342 GIMAP6Q6P9H5 292 aa21.01■□□□□ 0.95
RHBDD3-207ENST00000496342 ANKRD13CQ8N6S4 541 aa21.01■□□□□ 0.95
RHBDD3-207ENST00000496342 LAMA4Q16363 1823 aa21.01■□□□□ 0.95
RHBDD3-207ENST00000496342 C19orf81C9J6K1 198 aa21■□□□□ 0.95
RHBDD3-207ENST00000496342 PRDM1O75626 825 aa21■□□□□ 0.95
RHBDD3-207ENST00000496342 GSPT1P15170 499 aaKnown RBP21■□□□□ 0.95
RHBDD3-207ENST00000496342 USP17L2Q6R6M4 530 aa21■□□□□ 0.95
RHBDD3-207ENST00000496342 TMEM179Q6ZVK1 233 aa21■□□□□ 0.95
RHBDD3-207ENST00000496342 PTPN22Q9Y2R2 807 aa21■□□□□ 0.95
RHBDD3-207ENST00000496342 PLXNB2O15031 1838 aa20.99■□□□□ 0.95
RHBDD3-207ENST00000496342 COL11A1P12107 1806 aaPredicted RBP20.99■□□□□ 0.95
RHBDD3-207ENST00000496342 RASA1P20936 1047 aa20.99■□□□□ 0.95
RHBDD3-207ENST00000496342 PSMC4P43686 418 aa20.99■□□□□ 0.95
RHBDD3-207ENST00000496342 PKN2Q16513 984 aaKnown RBP20.99■□□□□ 0.95
RHBDD3-207ENST00000496342 KIAA1755Q5JYT7 1200 aa20.99■□□□□ 0.95
RHBDD3-207ENST00000496342 SKAP1Q86WV1 359 aa20.99■□□□□ 0.95
RHBDD3-207ENST00000496342 TRIM47Q96LD4 638 aa20.99■□□□□ 0.95
RHBDD3-207ENST00000496342 NAPBQ9H115 298 aa20.99■□□□□ 0.95
RHBDD3-207ENST00000496342 HELLSQ9NRZ9 838 aa20.99■□□□□ 0.95
RHBDD3-207ENST00000496342 PNMA3Q9UL41 463 aa20.99■□□□□ 0.95
RHBDD3-207ENST00000496342 PTCH2Q9Y6C5 1203 aa20.99■□□□□ 0.95
RHBDD3-207ENST00000496342 SDSP20132 328 aa20.98■□□□□ 0.95
RHBDD3-207ENST00000496342 OSBPP22059 807 aa20.98■□□□□ 0.95
RHBDD3-207ENST00000496342 IRX3P78415 501 aaPredicted RBP20.98■□□□□ 0.95
RHBDD3-207ENST00000496342 ICA1Q05084 483 aa20.98■□□□□ 0.95
RHBDD3-207ENST00000496342 SIAH1Q8IUQ4 282 aa20.98■□□□□ 0.95
RHBDD3-207ENST00000496342 P2RX7Q99572 595 aaKnown RBP20.98■□□□□ 0.95
RHBDD3-207ENST00000496342 KIAA1683Q9H0B3 1180 aa20.98■□□□□ 0.95
RHBDD3-207ENST00000496342 VCAM1P19320 739 aa20.97■□□□□ 0.95
RHBDD3-207ENST00000496342 SOX10P56693 466 aa20.97■□□□□ 0.95
RHBDD3-207ENST00000496342 CTDSPL2Q05D32 466 aa20.97■□□□□ 0.95
RHBDD3-207ENST00000496342 PABPC4Q13310 644 aaKnown RBP eCLIP20.97■□□□□ 0.95
RHBDD3-207ENST00000496342 KIF22Q14807 665 aa20.97■□□□□ 0.95
RHBDD3-207ENST00000496342 MCMDC2Q4G0Z9 681 aa20.97■□□□□ 0.95
RHBDD3-207ENST00000496342 TTC22Q5TAA0 569 aa20.97■□□□□ 0.95
RHBDD3-207ENST00000496342 C12orf42Q96LP6 360 aa20.97■□□□□ 0.95
RHBDD3-207ENST00000496342 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.97■□□□□ 0.95
RHBDD3-207ENST00000496342 NACAP1Q9BZK3 213 aa20.97■□□□□ 0.95
RHBDD3-207ENST00000496342 TACC3Q9Y6A5 838 aa20.97■□□□□ 0.95
RHBDD3-207ENST00000496342 A0A0G2JMZ2 1700 aa20.97■□□□□ 0.95
RHBDD3-207ENST00000496342 ATP2B2Q01814 1243 aa20.96■□□□□ 0.95
RHBDD3-207ENST00000496342 PPARAQ07869 468 aa20.96■□□□□ 0.95
RHBDD3-207ENST00000496342 POTEEQ6S8J3 1075 aa20.96■□□□□ 0.95
RHBDD3-207ENST00000496342 CCDC17Q96LX7 622 aa20.96■□□□□ 0.95
RHBDD3-207ENST00000496342 INCENPQ9NQS7 918 aa20.96■□□□□ 0.95
RHBDD3-207ENST00000496342 FMNL1O95466 1100 aaPredicted RBP20.95■□□□□ 0.94
RHBDD3-207ENST00000496342 EEF2P13639 858 aaKnown RBP20.95■□□□□ 0.94
RHBDD3-207ENST00000496342 HOXA7P31268 230 aaPredicted RBP20.95■□□□□ 0.94
RHBDD3-207ENST00000496342 HERVK_113P62684 666 aa20.95■□□□□ 0.94
RHBDD3-207ENST00000496342 CWC27Q6UX04 472 aaKnown RBP20.95■□□□□ 0.94
RHBDD3-207ENST00000496342 IL25Q9H293 177 aa20.95■□□□□ 0.94
RHBDD3-207ENST00000496342 RPAP3Q9H6T3 665 aaPredicted RBP20.95■□□□□ 0.94
RHBDD3-207ENST00000496342 MKNK2Q9HBH9 465 aa20.95■□□□□ 0.94
RHBDD3-207ENST00000496342 TXNRD2Q9NNW7 524 aa20.95■□□□□ 0.94
RHBDD3-207ENST00000496342 CCDC171Q6TFL3 1326 aa20.95■□□□□ 0.94
RHBDD3-207ENST00000496342 HTTP42858 3142 aa20.95■□□□□ 0.94
RHBDD3-207ENST00000496342 USP14P54578 494 aa20.94■□□□□ 0.94
RHBDD3-207ENST00000496342 FAM110CQ1W6H9 321 aa20.94■□□□□ 0.94
RHBDD3-207ENST00000496342 SPICE1Q8N0Z3 855 aa20.94■□□□□ 0.94
RHBDD3-207ENST00000496342 TAOK2Q9UL54 1235 aa20.94■□□□□ 0.94
RHBDD3-207ENST00000496342 GABRQQ9UN88 632 aa20.94■□□□□ 0.94
RHBDD3-207ENST00000496342 RBBP6Q7Z6E9 1792 aaKnown RBP20.94■□□□□ 0.94
RHBDD3-207ENST00000496342 HSPD1P10809 573 aaKnown RBP20.93■□□□□ 0.94
RHBDD3-207ENST00000496342 PRKCZQ05513 592 aa20.93■□□□□ 0.94
RHBDD3-207ENST00000496342 PAGR1Q9BTK6 254 aa20.93■□□□□ 0.94
RHBDD3-207ENST00000496342 ARHGEF10LQ9HCE6 1279 aa20.93■□□□□ 0.94
RHBDD3-207ENST00000496342 DIAPH3Q9NSV4 1193 aa20.93■□□□□ 0.94
RHBDD3-207ENST00000496342 MYPNQ86TC9 1320 aa20.93■□□□□ 0.94
RHBDD3-207ENST00000496342 GCLCP48506 637 aaPredicted RBP20.92■□□□□ 0.94
RHBDD3-207ENST00000496342 FCGRTP55899 365 aa20.92■□□□□ 0.94
RHBDD3-207ENST00000496342 FAM47AQ5JRC9 791 aa20.92■□□□□ 0.94
RHBDD3-207ENST00000496342 CATSPERGQ6ZRH7 1159 aa20.92■□□□□ 0.94
RHBDD3-207ENST00000496342 SRRDQ9UH36 339 aa20.92■□□□□ 0.94
RHBDD3-207ENST00000496342 USP17L15C9J2P7 530 aa20.91■□□□□ 0.94
RHBDD3-207ENST00000496342 USP17L13C9JLJ4 530 aa20.91■□□□□ 0.94
RHBDD3-207ENST00000496342 USP17L11C9JVI0 530 aa20.91■□□□□ 0.94
RHBDD3-207ENST00000496342 USP17L18D6R9N7 530 aa20.91■□□□□ 0.94
RHBDD3-207ENST00000496342 USP17L22D6RA61 530 aa20.91■□□□□ 0.94
RHBDD3-207ENST00000496342 USP17L17D6RBQ6 530 aa20.91■□□□□ 0.94
RHBDD3-207ENST00000496342 USP17L19D6RCP7 530 aa20.91■□□□□ 0.94
RHBDD3-207ENST00000496342 USP17L20D6RJB6 530 aa20.91■□□□□ 0.94
RHBDD3-207ENST00000496342 MYCP01106 439 aaPredicted RBP20.91■□□□□ 0.94
RHBDD3-207ENST00000496342 HAND2P61296 217 aa20.91■□□□□ 0.94
RHBDD3-207ENST00000496342 USP17L24Q0WX57 530 aa20.91■□□□□ 0.94
RHBDD3-207ENST00000496342 ARHGEF6Q15052 776 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms