RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 USP17L22D6RA61 530 aa10.72□□□□□ -0.69
SORT1-208ENST00000495777 USP17L17D6RBQ6 530 aa10.72□□□□□ -0.69
SORT1-208ENST00000495777 USP17L19D6RCP7 530 aa10.72□□□□□ -0.69
SORT1-208ENST00000495777 USP17L20D6RJB6 530 aa10.72□□□□□ -0.69
SORT1-208ENST00000495777 IGHA2P01877 340 aa10.72□□□□□ -0.69
SORT1-208ENST00000495777 CYP7A1P22680 504 aa10.72□□□□□ -0.69
SORT1-208ENST00000495777 CCND3P30281 292 aaPredicted RBP10.72□□□□□ -0.69
SORT1-208ENST00000495777 USP17L24Q0WX57 530 aa10.72□□□□□ -0.69
SORT1-208ENST00000495777 OS9Q13438 667 aaPredicted RBP10.72□□□□□ -0.69
SORT1-208ENST00000495777 CCL14Q16627 93 aa10.72□□□□□ -0.69
SORT1-208ENST00000495777 EAF2Q96CJ1 260 aaPredicted RBP10.72□□□□□ -0.69
SORT1-208ENST00000495777 KIAA1683Q9H0B3 1180 aa10.72□□□□□ -0.69
SORT1-208ENST00000495777 SERPINB13Q9UIV8 391 aa10.72□□□□□ -0.69
SORT1-208ENST00000495777 IDH1O75874 414 aaKnown RBP10.71□□□□□ -0.69
SORT1-208ENST00000495777 HOXC6P09630 235 aa10.71□□□□□ -0.69
SORT1-208ENST00000495777 SYN1P17600 705 aa10.71□□□□□ -0.69
SORT1-208ENST00000495777 MAP2K5Q13163 448 aa10.71□□□□□ -0.69
SORT1-208ENST00000495777 DDX60LQ5H9U9 1706 aaKnown RBP10.71□□□□□ -0.69
SORT1-208ENST00000495777 FOCADQ5VW36 1801 aa10.71□□□□□ -0.69
SORT1-208ENST00000495777 CATSPERGQ6ZRH7 1159 aa10.71□□□□□ -0.69
SORT1-208ENST00000495777 TDHQ8IZJ6 230 aa10.71□□□□□ -0.69
SORT1-208ENST00000495777 MIGA1Q8NAN2 632 aa10.71□□□□□ -0.69
SORT1-208ENST00000495777 SLC17A8Q8NDX2 589 aa10.71□□□□□ -0.69
SORT1-208ENST00000495777 PAGR1Q9BTK6 254 aa10.71□□□□□ -0.69
SORT1-208ENST00000495777 C1orf115Q9H7X2 142 aa10.71□□□□□ -0.69
SORT1-208ENST00000495777 SLC15A5A6NIM6 579 aa10.7□□□□□ -0.7
SORT1-208ENST00000495777 NEFLP07196 543 aa10.7□□□□□ -0.7
SORT1-208ENST00000495777 VCAM1P19320 739 aa10.7□□□□□ -0.7
SORT1-208ENST00000495777 PTPREP23469 700 aa10.7□□□□□ -0.7
SORT1-208ENST00000495777 SHMT1P34896 483 aa10.7□□□□□ -0.7
SORT1-208ENST00000495777 USP5P45974 858 aa10.7□□□□□ -0.7
SORT1-208ENST00000495777 USP14P54578 494 aa10.7□□□□□ -0.7
SORT1-208ENST00000495777 CCNA1P78396 465 aa10.7□□□□□ -0.7
SORT1-208ENST00000495777 GABPAQ06546 454 aa10.7□□□□□ -0.7
SORT1-208ENST00000495777 LRRC26Q2I0M4 334 aa10.7□□□□□ -0.7
SORT1-208ENST00000495777 TTC6Q86TZ1 520 aa10.7□□□□□ -0.7
SORT1-208ENST00000495777 CCAR1Q8IX12 1150 aaKnown RBP10.7□□□□□ -0.7
SORT1-208ENST00000495777 MAGEB6Q8N7X4 407 aa10.7□□□□□ -0.7
SORT1-208ENST00000495777 EDC3Q96F86 508 aaKnown RBP10.7□□□□□ -0.7
SORT1-208ENST00000495777 RIOK1Q9BRS2 568 aaKnown RBP10.7□□□□□ -0.7
SORT1-208ENST00000495777 CCDC8Q9H0W5 538 aaPredicted RBP10.7□□□□□ -0.7
SORT1-208ENST00000495777 FLRT1Q9NZU1 646 aa10.7□□□□□ -0.7
SORT1-208ENST00000495777 SPDYE16A6NNV3 312 aaPredicted RBP10.69□□□□□ -0.7
SORT1-208ENST00000495777 GLRX3O76003 335 aaKnown RBP10.69□□□□□ -0.7
SORT1-208ENST00000495777 RLBP1P12271 317 aa10.69□□□□□ -0.7
SORT1-208ENST00000495777 GUCY1A2P33402 732 aa10.69□□□□□ -0.7
SORT1-208ENST00000495777 PLCD1P51178 756 aa10.69□□□□□ -0.7
SORT1-208ENST00000495777 MAP3K12Q12852 859 aa10.69□□□□□ -0.7
SORT1-208ENST00000495777 GRB14Q14449 540 aa10.69□□□□□ -0.7
SORT1-208ENST00000495777 RAB3GAP1Q15042 981 aa10.69□□□□□ -0.7
SORT1-208ENST00000495777 ZYXQ15942 572 aaKnown RBP10.69□□□□□ -0.7
SORT1-208ENST00000495777 ABCB5Q2M3G0 1257 aa10.69□□□□□ -0.7
SORT1-208ENST00000495777 CERKLQ49MI3 558 aaPredicted RBP10.69□□□□□ -0.7
SORT1-208ENST00000495777 CEP85Q6P2H3 762 aa10.69□□□□□ -0.7
SORT1-208ENST00000495777 DEFB123Q8N688 67 aa10.69□□□□□ -0.7
SORT1-208ENST00000495777 ACER1Q8TDN7 264 aa10.69□□□□□ -0.7
SORT1-208ENST00000495777 FEZ1Q99689 392 aa10.69□□□□□ -0.7
SORT1-208ENST00000495777 UBE2OQ9C0C9 1292 aaKnown RBP10.69□□□□□ -0.7
SORT1-208ENST00000495777 ANTXR1Q9H6X2 564 aa10.69□□□□□ -0.7
SORT1-208ENST00000495777 BTBD7Q9P203 1132 aa10.69□□□□□ -0.7
SORT1-208ENST00000495777 DDX19BQ9UMR2 479 aa10.69□□□□□ -0.7
SORT1-208ENST00000495777 STXBP5LQ9Y2K9 1186 aa10.69□□□□□ -0.7
SORT1-208ENST00000495777 SUPT16HQ9Y5B9 1047 aaKnown RBP10.69□□□□□ -0.7
SORT1-208ENST00000495777 CUL9Q8IWT3 2517 aa10.69□□□□□ -0.7
SORT1-208ENST00000495777 CDK5RAP2Q96SN8 1893 aa10.68□□□□□ -0.7
SORT1-208ENST00000495777 DLL1O00548 723 aa10.68□□□□□ -0.7
SORT1-208ENST00000495777 MSCO60682 206 aa10.68□□□□□ -0.7
SORT1-208ENST00000495777 MFSD14CQ5VZR4 134 aa10.68□□□□□ -0.7
SORT1-208ENST00000495777 RPAP3Q9H6T3 665 aaPredicted RBP10.68□□□□□ -0.7
SORT1-208ENST00000495777 MTMR10Q9NXD2 777 aa10.68□□□□□ -0.7
SORT1-208ENST00000495777 NDUFB9Q9Y6M9 179 aa10.68□□□□□ -0.7
SORT1-208ENST00000495777 ERICH6BQ5W0A0 696 aa10.67□□□□□ -0.7
SORT1-208ENST00000495777 Q7L0L9 218 aa10.67□□□□□ -0.7
SORT1-208ENST00000495777 ERC1Q8IUD2 1116 aa10.67□□□□□ -0.7
SORT1-208ENST00000495777 ITPRIPQ8IWB1 547 aa10.67□□□□□ -0.7
SORT1-208ENST00000495777 TRPV1Q8NER1 839 aa10.67□□□□□ -0.7
SORT1-208ENST00000495777 NPLOC4Q8TAT6 608 aa10.67□□□□□ -0.7
SORT1-208ENST00000495777 LPAR1Q92633 364 aa10.67□□□□□ -0.7
SORT1-208ENST00000495777 CWC22Q9HCG8 908 aaKnown RBP10.67□□□□□ -0.7
SORT1-208ENST00000495777 CABP5Q9NP86 173 aa10.67□□□□□ -0.7
SORT1-208ENST00000495777 DDX20Q9UHI6 824 aaKnown RBP10.67□□□□□ -0.7
SORT1-208ENST00000495777 A0A1W2PRG0 241 aa10.66□□□□□ -0.7
SORT1-208ENST00000495777 DNM1LO00429 736 aa10.66□□□□□ -0.7
SORT1-208ENST00000495777 CYBAP13498 195 aa10.66□□□□□ -0.7
SORT1-208ENST00000495777 CYP2C19P33261 490 aa10.66□□□□□ -0.7
SORT1-208ENST00000495777 ATP2B2Q01814 1243 aa10.66□□□□□ -0.7
SORT1-208ENST00000495777 SEPT2Q15019 361 aa10.66□□□□□ -0.7
SORT1-208ENST00000495777 OLFML2BQ68BL8 750 aa10.66□□□□□ -0.7
SORT1-208ENST00000495777 AACSQ86V21 672 aa10.66□□□□□ -0.7
SORT1-208ENST00000495777 SHCBP1Q8NEM2 672 aa10.66□□□□□ -0.7
SORT1-208ENST00000495777 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.66□□□□□ -0.7
SORT1-208ENST00000495777 EXOC6BQ9Y2D4 811 aa10.66□□□□□ -0.7
SORT1-208ENST00000495777 IVNS1ABPQ9Y6Y0 642 aa10.66□□□□□ -0.7
SORT1-208ENST00000495777 MAGEB6P1A0A0J9YX57 407 aa10.65□□□□□ -0.7
SORT1-208ENST00000495777 TCRBV5S4A2TA0A5A2 114 aa10.65□□□□□ -0.7
SORT1-208ENST00000495777 POTEB2H3BUK9 544 aa10.65□□□□□ -0.7
SORT1-208ENST00000495777 STRNO43815 780 aa10.65□□□□□ -0.7
SORT1-208ENST00000495777 PDE6AP16499 860 aa10.65□□□□□ -0.7
SORT1-208ENST00000495777 MDM2Q00987 491 aaPredicted RBP10.65□□□□□ -0.7
SORT1-208ENST00000495777 EVX2Q03828 476 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms