RNA–Protein interactions for RNA: ENST00000495653.1

PTPN23-205, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 2

Gene PTPN23, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-205ENST00000495653 TAOK2Q9UL54 1235 aa16.72■□□□□ 0.27
PTPN23-205ENST00000495653 ROBO3Q96MS0 1386 aa16.72■□□□□ 0.27
PTPN23-205ENST00000495653 SDSP20132 328 aa16.71■□□□□ 0.27
PTPN23-205ENST00000495653 MCMDC2Q4G0Z9 681 aa16.71■□□□□ 0.27
PTPN23-205ENST00000495653 TTC22Q5TAA0 569 aa16.71■□□□□ 0.27
PTPN23-205ENST00000495653 TMEM179Q6ZVK1 233 aa16.71■□□□□ 0.27
PTPN23-205ENST00000495653 ZNF589Q86UQ0 364 aaPredicted RBP16.71■□□□□ 0.27
PTPN23-205ENST00000495653 SMCR8Q8TEV9 937 aaPredicted RBP16.71■□□□□ 0.27
PTPN23-205ENST00000495653 NAPBQ9H115 298 aa16.71■□□□□ 0.27
PTPN23-205ENST00000495653 BCRP11274 1271 aa16.7■□□□□ 0.26
PTPN23-205ENST00000495653 GSPT1P15170 499 aaKnown RBP16.7■□□□□ 0.26
PTPN23-205ENST00000495653 LACTBP83111 547 aaPredicted RBP16.7■□□□□ 0.26
PTPN23-205ENST00000495653 USP17L2Q6R6M4 530 aa16.7■□□□□ 0.26
PTPN23-205ENST00000495653 TICAM2Q86XR7 235 aa16.7■□□□□ 0.26
PTPN23-205ENST00000495653 CCDC17Q96LX7 622 aa16.7■□□□□ 0.26
PTPN23-205ENST00000495653 ASCC2Q9H1I8 757 aaPredicted RBP16.7■□□□□ 0.26
PTPN23-205ENST00000495653 EFCC1Q9HA90 598 aa16.7■□□□□ 0.26
PTPN23-205ENST00000495653 PNMA3Q9UL41 463 aa16.7■□□□□ 0.26
PTPN23-205ENST00000495653 GREB1LQ9C091 1923 aaPredicted RBP16.7■□□□□ 0.26
PTPN23-205ENST00000495653 A0A1W2PRG0 241 aa16.69■□□□□ 0.26
PTPN23-205ENST00000495653 PRDM1O75626 825 aa16.69■□□□□ 0.26
PTPN23-205ENST00000495653 RASA1P20936 1047 aa16.69■□□□□ 0.26
PTPN23-205ENST00000495653 CTGFP29279 349 aa16.69■□□□□ 0.26
PTPN23-205ENST00000495653 PABPC4Q13310 644 aaKnown RBP eCLIP16.69■□□□□ 0.26
PTPN23-205ENST00000495653 PKN2Q16513 984 aaKnown RBP16.69■□□□□ 0.26
PTPN23-205ENST00000495653 KIAA1683Q9H0B3 1180 aa16.69■□□□□ 0.26
PTPN23-205ENST00000495653 MGAMO43451 1857 aa16.69■□□□□ 0.26
PTPN23-205ENST00000495653 CCDC171Q6TFL3 1326 aa16.69■□□□□ 0.26
PTPN23-205ENST00000495653 OSBPP22059 807 aa16.68■□□□□ 0.26
PTPN23-205ENST00000495653 IRX3P78415 501 aaPredicted RBP16.68■□□□□ 0.26
PTPN23-205ENST00000495653 ICA1Q05084 483 aa16.68■□□□□ 0.26
PTPN23-205ENST00000495653 PPARAQ07869 468 aa16.68■□□□□ 0.26
PTPN23-205ENST00000495653 KIF22Q14807 665 aa16.68■□□□□ 0.26
PTPN23-205ENST00000495653 FBXO46Q6PJ61 603 aaPredicted RBP16.68■□□□□ 0.26
PTPN23-205ENST00000495653 CWC27Q6UX04 472 aaKnown RBP16.68■□□□□ 0.26
PTPN23-205ENST00000495653 SIAH1Q8IUQ4 282 aa16.68■□□□□ 0.26
PTPN23-205ENST00000495653 ANKRD13CQ8N6S4 541 aa16.68■□□□□ 0.26
PTPN23-205ENST00000495653 C12orf42Q96LP6 360 aa16.68■□□□□ 0.26
PTPN23-205ENST00000495653 MKNK2Q9HBH9 465 aa16.68■□□□□ 0.26
PTPN23-205ENST00000495653 DIAPH3Q9NSV4 1193 aa16.68■□□□□ 0.26
PTPN23-205ENST00000495653 HPS5Q9UPZ3 1129 aa16.68■□□□□ 0.26
PTPN23-205ENST00000495653 CCDC85CA6NKD9 419 aa16.67■□□□□ 0.26
PTPN23-205ENST00000495653 VCAM1P19320 739 aa16.67■□□□□ 0.26
PTPN23-205ENST00000495653 HOXA7P31268 230 aaPredicted RBP16.67■□□□□ 0.26
PTPN23-205ENST00000495653 USP14P54578 494 aa16.67■□□□□ 0.26
PTPN23-205ENST00000495653 SKAP1Q86WV1 359 aa16.67■□□□□ 0.26
PTPN23-205ENST00000495653 P2RX7Q99572 595 aaKnown RBP16.67■□□□□ 0.26
PTPN23-205ENST00000495653 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.67■□□□□ 0.26
PTPN23-205ENST00000495653 PEX10O60683 326 aa16.66■□□□□ 0.26
PTPN23-205ENST00000495653 HSPD1P10809 573 aaKnown RBP16.66■□□□□ 0.26
PTPN23-205ENST00000495653 EEF2P13639 858 aaKnown RBP16.66■□□□□ 0.26
PTPN23-205ENST00000495653 PSMC4P43686 418 aa16.66■□□□□ 0.26
PTPN23-205ENST00000495653 ATP2B2Q01814 1243 aa16.66■□□□□ 0.26
PTPN23-205ENST00000495653 CTDSPL2Q05D32 466 aa16.66■□□□□ 0.26
PTPN23-205ENST00000495653 KIAA1755Q5JYT7 1200 aa16.66■□□□□ 0.26
PTPN23-205ENST00000495653 CENPQQ7L2Z9 268 aaPredicted RBP16.66■□□□□ 0.26
PTPN23-205ENST00000495653 TRIM47Q96LD4 638 aa16.66■□□□□ 0.26
PTPN23-205ENST00000495653 ARHGEF10LQ9HCE6 1279 aa16.66■□□□□ 0.26
PTPN23-205ENST00000495653 PTPN22Q9Y2R2 807 aa16.66■□□□□ 0.26
PTPN23-205ENST00000495653 HIP1O00291 1037 aa16.65■□□□□ 0.26
PTPN23-205ENST00000495653 FMNL1O95466 1100 aaPredicted RBP16.65■□□□□ 0.26
PTPN23-205ENST00000495653 FGAP02671 866 aa16.65■□□□□ 0.26
PTPN23-205ENST00000495653 SLC3A2P08195 630 aaKnown RBP16.65■□□□□ 0.26
PTPN23-205ENST00000495653 ARHGEF6Q15052 776 aa16.65■□□□□ 0.26
PTPN23-205ENST00000495653 ALX1Q15699 326 aa16.65■□□□□ 0.26
PTPN23-205ENST00000495653 KANSL2Q9H9L4 492 aa16.65■□□□□ 0.26
PTPN23-205ENST00000495653 INCENPQ9NQS7 918 aa16.65■□□□□ 0.26
PTPN23-205ENST00000495653 USP17L15C9J2P7 530 aa16.64■□□□□ 0.25
PTPN23-205ENST00000495653 USP17L13C9JLJ4 530 aa16.64■□□□□ 0.25
PTPN23-205ENST00000495653 USP17L11C9JVI0 530 aa16.64■□□□□ 0.25
PTPN23-205ENST00000495653 USP17L18D6R9N7 530 aa16.64■□□□□ 0.25
PTPN23-205ENST00000495653 USP17L22D6RA61 530 aa16.64■□□□□ 0.25
PTPN23-205ENST00000495653 USP17L17D6RBQ6 530 aa16.64■□□□□ 0.25
PTPN23-205ENST00000495653 USP17L19D6RCP7 530 aa16.64■□□□□ 0.25
PTPN23-205ENST00000495653 USP17L20D6RJB6 530 aa16.64■□□□□ 0.25
PTPN23-205ENST00000495653 GCLCP48506 637 aaPredicted RBP16.64■□□□□ 0.25
PTPN23-205ENST00000495653 HERVK_113P62684 666 aa16.64■□□□□ 0.25
PTPN23-205ENST00000495653 PDE4BQ07343 736 aa16.64■□□□□ 0.25
PTPN23-205ENST00000495653 USP17L24Q0WX57 530 aa16.64■□□□□ 0.25
PTPN23-205ENST00000495653 FAM110CQ1W6H9 321 aa16.64■□□□□ 0.25
PTPN23-205ENST00000495653 ZNF444Q8N0Y2 327 aaPredicted RBP16.64■□□□□ 0.25
PTPN23-205ENST00000495653 SPICE1Q8N0Z3 855 aa16.64■□□□□ 0.25
PTPN23-205ENST00000495653 IL25Q9H293 177 aa16.64■□□□□ 0.25
PTPN23-205ENST00000495653 RPAP3Q9H6T3 665 aaPredicted RBP16.64■□□□□ 0.25
PTPN23-205ENST00000495653 ZNF287Q9HBT7 754 aa16.64■□□□□ 0.25
PTPN23-205ENST00000495653 TMX2Q9Y320 296 aa16.64■□□□□ 0.25
PTPN23-205ENST00000495653 TACC3Q9Y6A5 838 aa16.64■□□□□ 0.25
PTPN23-205ENST00000495653 PTCH2Q9Y6C5 1203 aa16.64■□□□□ 0.25
PTPN23-205ENST00000495653 MYH4Q9Y623 1939 aa16.64■□□□□ 0.25
PTPN23-205ENST00000495653 NEFLP07196 543 aa16.63■□□□□ 0.25
PTPN23-205ENST00000495653 MFAP1P55081 439 aaKnown RBP16.63■□□□□ 0.25
PTPN23-205ENST00000495653 FCGRTP55899 365 aa16.63■□□□□ 0.25
PTPN23-205ENST00000495653 FAM47AQ5JRC9 791 aa16.63■□□□□ 0.25
PTPN23-205ENST00000495653 POTEEQ6S8J3 1075 aa16.63■□□□□ 0.25
PTPN23-205ENST00000495653 CATSPERGQ6ZRH7 1159 aa16.63■□□□□ 0.25
PTPN23-205ENST00000495653 SH2D4AQ9H788 454 aa16.63■□□□□ 0.25
PTPN23-205ENST00000495653 VCPKMTQ9H867 229 aa16.63■□□□□ 0.25
PTPN23-205ENST00000495653 TXNRD2Q9NNW7 524 aa16.63■□□□□ 0.25
PTPN23-205ENST00000495653 ANAPC4Q9UJX5 808 aa16.63■□□□□ 0.25
PTPN23-205ENST00000495653 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms