RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, human

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DOA-206	ENST00000495532	TEX11	Q8IYF3	940 aa		13.99	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	DHX36	Q9H2U1	1008 aa	Known RBP	13.99	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	SYNGAP1	Q96PV0	1343 aa		13.98	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.98	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.98	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	AKNAD1	Q5T1N1	836 aa		13.98	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	USP17L2	Q6R6M4	530 aa		13.98	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	MRPL50	Q8N5N7	158 aa	Known RBP	13.98	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.98	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	PPM1E	Q8WY54	764 aa		13.98	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	FERMT2	Q96AC1	680 aa		13.98	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	TIFA	Q96CG3	184 aa		13.98	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	C12orf42	Q96LP6	360 aa		13.98	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	GINM1	Q9NU53	330 aa		13.98	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	BTBD7	Q9P203	1132 aa		13.98	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	TACC3	Q9Y6A5	838 aa		13.98	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	IVNS1ABP	Q9Y6Y0	642 aa		13.98	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	PIEZO1	Q92508	2521 aa		13.98	□□□□□ -0.17
HLA-DOA-206	ENST00000495532		A0A0G2JMZ2	1700 aa		13.98	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	PTPRC	P08575	1304 aa		13.97	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	KIAA0355	O15063	1070 aa		13.97	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	SEPT4	O43236	478 aa		13.97	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	LDHC	P07864	332 aa		13.97	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	CLTB	P09497	229 aa		13.97	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	TIMM10	P62072	90 aa		13.97	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	GSTO1	P78417	241 aa		13.97	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	MRPS5	P82675	430 aa	Known RBP	13.97	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	LRRC41	Q15345	812 aa		13.97	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	OLFML2B	Q68BL8	750 aa		13.97	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	PI16	Q6UXB8	463 aa		13.97	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	LBX2	Q6XYB7	198 aa		13.97	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	TBC1D9	Q6ZT07	1266 aa		13.97	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	HMG20B	Q9P0W2	317 aa		13.97	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	PA2G4	Q9UQ80	394 aa	Known RBP	13.97	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	CHD9	Q3L8U1	2897 aa		13.97	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	GBF1	Q92538	1859 aa		13.96	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	USP17L15	C9J2P7	530 aa		13.96	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	USP17L13	C9JLJ4	530 aa		13.96	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	USP17L11	C9JVI0	530 aa		13.96	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	USP17L18	D6R9N7	530 aa		13.96	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	USP17L22	D6RA61	530 aa		13.96	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	USP17L17	D6RBQ6	530 aa		13.96	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	USP17L19	D6RCP7	530 aa		13.96	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	USP17L20	D6RJB6	530 aa		13.96	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	MYCN	P04198	464 aa	Predicted RBP	13.96	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	FPGS	Q05932	587 aa		13.96	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	USP17L24	Q0WX57	530 aa		13.96	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	CATSPERG	Q6ZRH7	1159 aa		13.96	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	XAGE2	Q96GT9	111 aa		13.96	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	GAS2L1	Q99501	681 aa	Predicted RBP	13.96	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	PHF24	Q9UPV7	400 aa		13.96	□□□□□ -0.17
HLA-DOA-206	ENST00000495532	FLT1	P17948	1338 aa		13.95	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	XIRP2	A4UGR9	3374 aa		13.95	□□□□□ -0.18
HLA-DOA-206	ENST00000495532		A0A1B0GUL7	405 aa		13.95	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	RAG1	P15918	1043 aa		13.95	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	FAM47A	Q5JRC9	791 aa		13.95	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.95	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	NECAB3	Q96P71	396 aa	Predicted RBP	13.95	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	C1QTNF1	Q9BXJ1	281 aa		13.95	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	PRDM12	Q9H4Q4	367 aa		13.95	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	COPRS	Q9NQ92	184 aa		13.95	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.95	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	MYH1	P12882	1939 aa		13.95	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.95	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.95	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.94	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	VCAM1	P19320	739 aa		13.94	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	ADORA2A	P29274	412 aa		13.94	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	PBX2	P40425	430 aa		13.94	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	ADGRE1	Q14246	886 aa		13.94	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	MVP	Q14764	893 aa	Known RBP	13.94	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	ZYX	Q15942	572 aa	Known RBP	13.94	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	MAPKAPK5	Q8IW41	473 aa		13.94	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.94	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	SPATA5	Q8NB90	893 aa		13.94	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	PBX4	Q9BYU1	374 aa		13.94	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	RAI14	Q9P0K7	980 aa		13.94	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	PALD1	Q9ULE6	856 aa		13.94	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.94	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	REV3L	O60673	3130 aa		13.94	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	COBL	O75128	1261 aa		13.93	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	GH2	P01242	217 aa		13.93	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	PRAMEF19	Q5SWL8	479 aa		13.93	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	DPP9	Q86TI2	863 aa		13.93	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	TGFBRAP1	Q8WUH2	860 aa		13.93	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	CHD7	Q9P2D1	2997 aa		13.92	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	MUC6	Q6W4X9	2439 aa		13.92	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	GRXCR1	A8MXD5	290 aa		13.92	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	PQBP1	O60828	265 aa	Known RBP	13.92	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	UBTFL1	P0CB47	393 aa	Predicted RBP	13.92	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	CCDC85B	Q15834	202 aa	Predicted RBP	13.92	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	RASIP1	Q5U651	963 aa		13.92	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	FEZ1	Q99689	392 aa		13.92	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.92	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	TRIM34	Q9BYJ4	488 aa		13.92	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	KIAA1683	Q9H0B3	1180 aa		13.92	□□□□□ -0.18
HLA-DOA-206	ENST00000495532	TMEM39A	Q9NV64	488 aa		13.92	□□□□□ -0.18
HLA-DOA-206	ENST00000495532		A0A1W2PQ45	241 aa	Predicted RBP	13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms