RNA–Protein interactions for RNA: ENST00000495460.1

NUP58-214, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-214ENST00000495460 TTC6Q86TZ1 520 aa18.33■□□□□ 0.52
NUP58-214ENST00000495460 DIS3LQ8TF46 1054 aaKnown RBP18.33■□□□□ 0.52
NUP58-214ENST00000495460 KIAA1683Q9H0B3 1180 aa18.33■□□□□ 0.52
NUP58-214ENST00000495460 SERPINB13Q9UIV8 391 aa18.33■□□□□ 0.52
NUP58-214ENST00000495460 USP17L15C9J2P7 530 aa18.32■□□□□ 0.52
NUP58-214ENST00000495460 USP17L13C9JLJ4 530 aa18.32■□□□□ 0.52
NUP58-214ENST00000495460 USP17L11C9JVI0 530 aa18.32■□□□□ 0.52
NUP58-214ENST00000495460 USP17L18D6R9N7 530 aa18.32■□□□□ 0.52
NUP58-214ENST00000495460 USP17L22D6RA61 530 aa18.32■□□□□ 0.52
NUP58-214ENST00000495460 USP17L17D6RBQ6 530 aa18.32■□□□□ 0.52
NUP58-214ENST00000495460 USP17L19D6RCP7 530 aa18.32■□□□□ 0.52
NUP58-214ENST00000495460 USP17L20D6RJB6 530 aa18.32■□□□□ 0.52
NUP58-214ENST00000495460 HOXC6P09630 235 aa18.32■□□□□ 0.52
NUP58-214ENST00000495460 ZAP70P43403 619 aa18.32■□□□□ 0.52
NUP58-214ENST00000495460 USP17L24Q0WX57 530 aa18.32■□□□□ 0.52
NUP58-214ENST00000495460 OS9Q13438 667 aaPredicted RBP18.32■□□□□ 0.52
NUP58-214ENST00000495460 Q3C1V9 767 aa18.32■□□□□ 0.52
NUP58-214ENST00000495460 GPR142Q7Z601 462 aa18.32■□□□□ 0.52
NUP58-214ENST00000495460 PLEKHH3Q7Z736 793 aa18.32■□□□□ 0.52
NUP58-214ENST00000495460 CLUAP1Q96AJ1 413 aa18.32■□□□□ 0.52
NUP58-214ENST00000495460 DBNLQ9UJU6 430 aaKnown RBP18.32■□□□□ 0.52
NUP58-214ENST00000495460 ZKSCAN1P17029 563 aaPredicted RBP18.31■□□□□ 0.52
NUP58-214ENST00000495460 CYP2B6P20813 491 aa18.31■□□□□ 0.52
NUP58-214ENST00000495460 CACNB2Q08289 660 aaPredicted RBP18.31■□□□□ 0.52
NUP58-214ENST00000495460 TRIM32Q13049 653 aa18.31■□□□□ 0.52
NUP58-214ENST00000495460 POTEEQ6S8J3 1075 aa18.31■□□□□ 0.52
NUP58-214ENST00000495460 CATSPERGQ6ZRH7 1159 aa18.31■□□□□ 0.52
NUP58-214ENST00000495460 APBA2Q99767 749 aa18.31■□□□□ 0.52
NUP58-214ENST00000495460 PIH1D3Q9NQM4 214 aaKnown RBP18.31■□□□□ 0.52
NUP58-214ENST00000495460 MSCO60682 206 aa18.3■□□□□ 0.52
NUP58-214ENST00000495460 CYP7A1P22680 504 aa18.3■□□□□ 0.52
NUP58-214ENST00000495460 MAP3K12Q12852 859 aa18.3■□□□□ 0.52
NUP58-214ENST00000495460 ERC1Q8IUD2 1116 aa18.3■□□□□ 0.52
NUP58-214ENST00000495460 CCAR1Q8IX12 1150 aaKnown RBP18.3■□□□□ 0.52
NUP58-214ENST00000495460 EAF2Q96CJ1 260 aaPredicted RBP18.3■□□□□ 0.52
NUP58-214ENST00000495460 TSPYL2Q9H2G4 693 aaPredicted RBP18.3■□□□□ 0.52
NUP58-214ENST00000495460 LAMA2P24043 3122 aaKnown RBP18.29■□□□□ 0.52
NUP58-214ENST00000495460 SLC15A5A6NIM6 579 aa18.29■□□□□ 0.52
NUP58-214ENST00000495460 GH2P01242 217 aa18.29■□□□□ 0.52
NUP58-214ENST00000495460 IGHA2P01877 340 aa18.29■□□□□ 0.52
NUP58-214ENST00000495460 MAP2K5Q13163 448 aa18.29■□□□□ 0.52
NUP58-214ENST00000495460 CERKLQ49MI3 558 aaPredicted RBP18.29■□□□□ 0.52
NUP58-214ENST00000495460 EDC3Q96F86 508 aaKnown RBP18.29■□□□□ 0.52
NUP58-214ENST00000495460 PORCNQ9H237 461 aa18.29■□□□□ 0.52
NUP58-214ENST00000495460 TNNQ9UQP3 1299 aa18.29■□□□□ 0.52
NUP58-214ENST00000495460 MYH1P12882 1939 aa18.29■□□□□ 0.52
NUP58-214ENST00000495460 DDX60LQ5H9U9 1706 aaKnown RBP18.29■□□□□ 0.52
NUP58-214ENST00000495460 MYO5AQ9Y4I1 1855 aaKnown RBP18.29■□□□□ 0.52
NUP58-214ENST00000495460 PFASO15067 1338 aa18.28■□□□□ 0.52
NUP58-214ENST00000495460 SOX1O00570 391 aaPredicted RBP18.28■□□□□ 0.52
NUP58-214ENST00000495460 STRNO43815 780 aa18.28■□□□□ 0.52
NUP58-214ENST00000495460 GDF11O95390 407 aa18.28■□□□□ 0.52
NUP58-214ENST00000495460 TTF1Q15361 905 aaPredicted RBP18.28■□□□□ 0.52
NUP58-214ENST00000495460 HSP90AB4PQ58FF6 505 aa18.28■□□□□ 0.52
NUP58-214ENST00000495460 ASTLQ6HA08 431 aaPredicted RBP18.28■□□□□ 0.52
NUP58-214ENST00000495460 C7orf61Q8IZ16 206 aa18.28■□□□□ 0.52
NUP58-214ENST00000495460 TDHQ8IZJ6 230 aa18.28■□□□□ 0.52
NUP58-214ENST00000495460 CUL9Q8IWT3 2517 aa18.28■□□□□ 0.52
NUP58-214ENST00000495460 ATMINO43313 823 aaPredicted RBP18.27■□□□□ 0.52
NUP58-214ENST00000495460 IDH1O75874 414 aaKnown RBP18.27■□□□□ 0.52
NUP58-214ENST00000495460 USP5P45974 858 aa18.27■□□□□ 0.52
NUP58-214ENST00000495460 DYNLL1P63167 89 aaKnown RBP18.27■□□□□ 0.52
NUP58-214ENST00000495460 CABP5Q9NP86 173 aa18.27■□□□□ 0.52
NUP58-214ENST00000495460 PLSCR2Q9NRY7 297 aa18.27■□□□□ 0.52
NUP58-214ENST00000495460 HOXC10Q9NYD6 342 aa18.27■□□□□ 0.52
NUP58-214ENST00000495460 CNMDO75829 334 aa18.26■□□□□ 0.51
NUP58-214ENST00000495460 PTPREP23469 700 aa18.26■□□□□ 0.51
NUP58-214ENST00000495460 GABPAQ06546 454 aa18.26■□□□□ 0.51
NUP58-214ENST00000495460 ABCB5Q2M3G0 1257 aa18.26■□□□□ 0.51
NUP58-214ENST00000495460 MFSD14CQ5VZR4 134 aa18.26■□□□□ 0.51
NUP58-214ENST00000495460 FTSJ3Q8IY81 847 aaKnown RBP18.26■□□□□ 0.51
NUP58-214ENST00000495460 SLC17A8Q8NDX2 589 aa18.26■□□□□ 0.51
NUP58-214ENST00000495460 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.26■□□□□ 0.51
NUP58-214ENST00000495460 RIOK1Q9BRS2 568 aaKnown RBP18.26■□□□□ 0.51
NUP58-214ENST00000495460 SAP30BPQ9UHR5 308 aaKnown RBP18.26■□□□□ 0.51
NUP58-214ENST00000495460 MAGEA10P43363 369 aaPredicted RBP18.25■□□□□ 0.51
NUP58-214ENST00000495460 GRB14Q14449 540 aa18.25■□□□□ 0.51
NUP58-214ENST00000495460 MAGEB6Q8N7X4 407 aa18.25■□□□□ 0.51
NUP58-214ENST00000495460 LRCH3Q96II8 777 aa18.25■□□□□ 0.51
NUP58-214ENST00000495460 CCDC8Q9H0W5 538 aaPredicted RBP18.25■□□□□ 0.51
NUP58-214ENST00000495460 VCAM1P19320 739 aa18.24■□□□□ 0.51
NUP58-214ENST00000495460 SHMT1P34896 483 aa18.24■□□□□ 0.51
NUP58-214ENST00000495460 COG2Q14746 738 aa18.24■□□□□ 0.51
NUP58-214ENST00000495460 SHROOM1Q2M3G4 852 aaPredicted RBP18.24■□□□□ 0.51
NUP58-214ENST00000495460 FAM109BQ6ICB4 259 aaPredicted RBP18.24■□□□□ 0.51
NUP58-214ENST00000495460 MB21D1Q8N884 522 aa18.24■□□□□ 0.51
NUP58-214ENST00000495460 LPAR1Q92633 364 aa18.24■□□□□ 0.51
NUP58-214ENST00000495460 FEZ1Q99689 392 aa18.24■□□□□ 0.51
NUP58-214ENST00000495460 PAGR1Q9BTK6 254 aa18.24■□□□□ 0.51
NUP58-214ENST00000495460 CCND3P30281 292 aaPredicted RBP18.23■□□□□ 0.51
NUP58-214ENST00000495460 RAB3GAP1Q15042 981 aa18.23■□□□□ 0.51
NUP58-214ENST00000495460 CCL14Q16627 93 aa18.23■□□□□ 0.51
NUP58-214ENST00000495460 OLFML2BQ68BL8 750 aa18.23■□□□□ 0.51
NUP58-214ENST00000495460 CEP85Q6P2H3 762 aa18.23■□□□□ 0.51
NUP58-214ENST00000495460 ABRAQ8N0Z2 381 aa18.23■□□□□ 0.51
NUP58-214ENST00000495460 SHCBP1Q8NEM2 672 aa18.23■□□□□ 0.51
NUP58-214ENST00000495460 TLR7Q9NYK1 1049 aaKnown RBP18.23■□□□□ 0.51
NUP58-214ENST00000495460 METRNQ9UJH8 293 aa18.23■□□□□ 0.51
NUP58-214ENST00000495460 ZMYND8Q9ULU4 1186 aaPredicted RBP18.23■□□□□ 0.51
NUP58-214ENST00000495460 STXBP5LQ9Y2K9 1186 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms