RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 EMILIN3Q9NT22 766 aa20.44■□□□□ 0.86
SNX17-209ENST00000494893 AGTPBP1Q9UPW5 1226 aa20.44■□□□□ 0.86
SNX17-209ENST00000494893 MPHOSPH10O00566 681 aaKnown RBP20.43■□□□□ 0.86
SNX17-209ENST00000494893 TLR2O60603 784 aa20.43■□□□□ 0.86
SNX17-209ENST00000494893 FGAP02671 866 aa20.43■□□□□ 0.86
SNX17-209ENST00000494893 CYP2C8P10632 490 aa20.43■□□□□ 0.86
SNX17-209ENST00000494893 TMEM179Q6ZVK1 233 aa20.43■□□□□ 0.86
SNX17-209ENST00000494893 HIP1O00291 1037 aa20.42■□□□□ 0.86
SNX17-209ENST00000494893 FKTNO75072 461 aa20.42■□□□□ 0.86
SNX17-209ENST00000494893 PRDM1O75626 825 aa20.42■□□□□ 0.86
SNX17-209ENST00000494893 CHMLP26374 656 aa20.42■□□□□ 0.86
SNX17-209ENST00000494893 CCDC17Q96LX7 622 aa20.42■□□□□ 0.86
SNX17-209ENST00000494893 INCENPQ9NQS7 918 aa20.42■□□□□ 0.86
SNX17-209ENST00000494893 SLC45A1Q9Y2W3 748 aa20.42■□□□□ 0.86
SNX17-209ENST00000494893 GREB1LQ9C091 1923 aaPredicted RBP20.41■□□□□ 0.86
SNX17-209ENST00000494893 CTDSPL2Q05D32 466 aa20.41■□□□□ 0.86
SNX17-209ENST00000494893 C17orf99Q6UX52 265 aa20.41■□□□□ 0.86
SNX17-209ENST00000494893 C12orf42Q96LP6 360 aa20.41■□□□□ 0.86
SNX17-209ENST00000494893 KIAA1683Q9H0B3 1180 aa20.41■□□□□ 0.86
SNX17-209ENST00000494893 ANAPC4Q9UJX5 808 aa20.41■□□□□ 0.86
SNX17-209ENST00000494893 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.41■□□□□ 0.86
SNX17-209ENST00000494893 ZMYM6O95789 1325 aa20.41■□□□□ 0.86
SNX17-209ENST00000494893 C19orf81C9J6K1 198 aa20.4■□□□□ 0.86
SNX17-209ENST00000494893 ZYXQ15942 572 aaKnown RBP20.4■□□□□ 0.86
SNX17-209ENST00000494893 KIAA1755Q5JYT7 1200 aa20.4■□□□□ 0.86
SNX17-209ENST00000494893 NBPF3Q9H094 633 aa20.4■□□□□ 0.86
SNX17-209ENST00000494893 CPA4Q9UI42 421 aa20.4■□□□□ 0.86
SNX17-209ENST00000494893 MYH8P13535 1937 aa20.39■□□□□ 0.86
SNX17-209ENST00000494893 IGKV6D-41A0A0C4DH26 115 aa20.39■□□□□ 0.85
SNX17-209ENST00000494893 BCRP11274 1271 aa20.39■□□□□ 0.85
SNX17-209ENST00000494893 USP17L2Q6R6M4 530 aa20.39■□□□□ 0.85
SNX17-209ENST00000494893 PARK7Q99497 189 aaKnown RBP20.39■□□□□ 0.85
SNX17-209ENST00000494893 MKNK2Q9HBH9 465 aa20.39■□□□□ 0.85
SNX17-209ENST00000494893 HOXA7P31268 230 aaPredicted RBP20.38■□□□□ 0.85
SNX17-209ENST00000494893 SP3Q02447 781 aa20.38■□□□□ 0.85
SNX17-209ENST00000494893 ICA1Q05084 483 aa20.38■□□□□ 0.85
SNX17-209ENST00000494893 TNS4Q8IZW8 715 aa20.38■□□□□ 0.85
SNX17-209ENST00000494893 NKX2-3Q8TAU0 364 aa20.38■□□□□ 0.85
SNX17-209ENST00000494893 CD99L2Q8TCZ2 262 aa20.38■□□□□ 0.85
SNX17-209ENST00000494893 ASCC2Q9H1I8 757 aaPredicted RBP20.38■□□□□ 0.85
SNX17-209ENST00000494893 TMOD4Q9NZQ9 345 aa20.38■□□□□ 0.85
SNX17-209ENST00000494893 FGRP09769 529 aa20.37■□□□□ 0.85
SNX17-209ENST00000494893 CTGFP29279 349 aa20.37■□□□□ 0.85
SNX17-209ENST00000494893 MFAP1P55081 439 aaKnown RBP20.37■□□□□ 0.85
SNX17-209ENST00000494893 POTEEQ6S8J3 1075 aa20.37■□□□□ 0.85
SNX17-209ENST00000494893 FEZ1Q99689 392 aa20.37■□□□□ 0.85
SNX17-209ENST00000494893 MCOLN1Q9GZU1 580 aa20.37■□□□□ 0.85
SNX17-209ENST00000494893 ZSWIM8A7E2V4 1837 aa20.37■□□□□ 0.85
SNX17-209ENST00000494893 RAD50Q92878 1312 aa20.36■□□□□ 0.85
SNX17-209ENST00000494893 EEF2P13639 858 aaKnown RBP20.36■□□□□ 0.85
SNX17-209ENST00000494893 VCAM1P19320 739 aa20.36■□□□□ 0.85
SNX17-209ENST00000494893 HAND2P61296 217 aa20.36■□□□□ 0.85
SNX17-209ENST00000494893 BMP2KLQ5H9B9 411 aa20.36■□□□□ 0.85
SNX17-209ENST00000494893 FAM47AQ5JRC9 791 aa20.36■□□□□ 0.85
SNX17-209ENST00000494893 CTU1Q7Z7A3 348 aaKnown RBP20.36■□□□□ 0.85
SNX17-209ENST00000494893 TBC1D10CQ8IV04 446 aa20.36■□□□□ 0.85
SNX17-209ENST00000494893 DSCC1Q9BVC3 393 aa20.36■□□□□ 0.85
SNX17-209ENST00000494893 ARHGAP39Q9C0H5 1083 aa20.36■□□□□ 0.85
SNX17-209ENST00000494893 TMX2Q9Y320 296 aa20.36■□□□□ 0.85
SNX17-209ENST00000494893 PLIN4Q96Q06 1357 aa20.35■□□□□ 0.85
SNX17-209ENST00000494893 SGSM2O43147 1006 aa20.35■□□□□ 0.85
SNX17-209ENST00000494893 USP14P54578 494 aa20.35■□□□□ 0.85
SNX17-209ENST00000494893 PDE4BQ07343 736 aa20.35■□□□□ 0.85
SNX17-209ENST00000494893 NEDD1Q8NHV4 660 aa20.35■□□□□ 0.85
SNX17-209ENST00000494893 P2RX7Q99572 595 aaKnown RBP20.35■□□□□ 0.85
SNX17-209ENST00000494893 KANSL2Q9H9L4 492 aa20.35■□□□□ 0.85
SNX17-209ENST00000494893 ORC4O43929 436 aa20.34■□□□□ 0.85
SNX17-209ENST00000494893 PEX10O60683 326 aa20.34■□□□□ 0.85
SNX17-209ENST00000494893 LACTBP83111 547 aaPredicted RBP20.34■□□□□ 0.85
SNX17-209ENST00000494893 PTH1RQ03431 593 aa20.34■□□□□ 0.85
SNX17-209ENST00000494893 PABPC4Q13310 644 aaKnown RBP eCLIP20.34■□□□□ 0.85
SNX17-209ENST00000494893 ZNF444Q8N0Y2 327 aaPredicted RBP20.34■□□□□ 0.85
SNX17-209ENST00000494893 ERO1AQ96HE7 468 aa20.34■□□□□ 0.85
SNX17-209ENST00000494893 SLC3A2P08195 630 aaKnown RBP20.33■□□□□ 0.85
SNX17-209ENST00000494893 OSBPP22059 807 aa20.33■□□□□ 0.85
SNX17-209ENST00000494893 TFAP4Q01664 338 aa20.33■□□□□ 0.85
SNX17-209ENST00000494893 OTOP1Q7RTM1 612 aa20.33■□□□□ 0.85
SNX17-209ENST00000494893 CEP95Q96GE4 821 aa20.33■□□□□ 0.85
SNX17-209ENST00000494893 VCPKMTQ9H867 229 aa20.33■□□□□ 0.85
SNX17-209ENST00000494893 ZNF287Q9HBT7 754 aa20.33■□□□□ 0.85
SNX17-209ENST00000494893 ARHGEF10LQ9HCE6 1279 aa20.33■□□□□ 0.85
SNX17-209ENST00000494893 NYAP2Q9P242 653 aa20.33■□□□□ 0.85
SNX17-209ENST00000494893 PNMA3Q9UL41 463 aa20.33■□□□□ 0.85
SNX17-209ENST00000494893 HERVK_113P62684 666 aa20.32■□□□□ 0.84
SNX17-209ENST00000494893 ATP2B2Q01814 1243 aa20.32■□□□□ 0.84
SNX17-209ENST00000494893 CATSPERGQ6ZRH7 1159 aa20.32■□□□□ 0.84
SNX17-209ENST00000494893 SMCR8Q8TEV9 937 aaPredicted RBP20.32■□□□□ 0.84
SNX17-209ENST00000494893 RPAP3Q9H6T3 665 aaPredicted RBP20.32■□□□□ 0.84
SNX17-209ENST00000494893 IL17RBQ9NRM6 502 aa20.32■□□□□ 0.84
SNX17-209ENST00000494893 MTMR4Q9NYA4 1195 aa20.32■□□□□ 0.84
SNX17-209ENST00000494893 HTTP42858 3142 aa20.32■□□□□ 0.84
SNX17-209ENST00000494893 USP17L15C9J2P7 530 aa20.31■□□□□ 0.84
SNX17-209ENST00000494893 USP17L13C9JLJ4 530 aa20.31■□□□□ 0.84
SNX17-209ENST00000494893 USP17L11C9JVI0 530 aa20.31■□□□□ 0.84
SNX17-209ENST00000494893 USP17L18D6R9N7 530 aa20.31■□□□□ 0.84
SNX17-209ENST00000494893 USP17L22D6RA61 530 aa20.31■□□□□ 0.84
SNX17-209ENST00000494893 USP17L17D6RBQ6 530 aa20.31■□□□□ 0.84
SNX17-209ENST00000494893 USP17L19D6RCP7 530 aa20.31■□□□□ 0.84
SNX17-209ENST00000494893 USP17L20D6RJB6 530 aa20.31■□□□□ 0.84
SNX17-209ENST00000494893 ECM2O94769 699 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms