RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 SEPT2Q15019 361 aa21.1■□□□□ 0.97
HDAC4-211ENST00000494800 NBPF11Q86T75 865 aa21.1■□□□□ 0.97
HDAC4-211ENST00000494800 SLC44A5Q8NCS7 719 aa21.1■□□□□ 0.97
HDAC4-211ENST00000494800 ARHGAP39Q9C0H5 1083 aa21.1■□□□□ 0.97
HDAC4-211ENST00000494800 KIAA1683Q9H0B3 1180 aa21.1■□□□□ 0.97
HDAC4-211ENST00000494800 SH2D4AQ9H788 454 aa21.1■□□□□ 0.97
HDAC4-211ENST00000494800 MINDY4BA8MYZ0 360 aa21.09■□□□□ 0.97
HDAC4-211ENST00000494800 ECM2O94769 699 aaPredicted RBP21.09■□□□□ 0.97
HDAC4-211ENST00000494800 ZYXQ15942 572 aaKnown RBP21.09■□□□□ 0.97
HDAC4-211ENST00000494800 FAM110CQ1W6H9 321 aa21.09■□□□□ 0.97
HDAC4-211ENST00000494800 ANKRD13CQ8N6S4 541 aa21.09■□□□□ 0.97
HDAC4-211ENST00000494800 GTF3C2Q8WUA4 911 aaPredicted RBP21.09■□□□□ 0.97
HDAC4-211ENST00000494800 C12orf42Q96LP6 360 aa21.09■□□□□ 0.97
HDAC4-211ENST00000494800 ARHGEF10LQ9HCE6 1279 aa21.09■□□□□ 0.97
HDAC4-211ENST00000494800 EMILIN3Q9NT22 766 aa21.09■□□□□ 0.97
HDAC4-211ENST00000494800 SLC9C1Q4G0N8 1177 aa21.08■□□□□ 0.97
HDAC4-211ENST00000494800 TRIM47Q96LD4 638 aa21.08■□□□□ 0.97
HDAC4-211ENST00000494800 NAPBQ9H115 298 aa21.08■□□□□ 0.97
HDAC4-211ENST00000494800 MKNK2Q9HBH9 465 aa21.08■□□□□ 0.97
HDAC4-211ENST00000494800 SRRDQ9UH36 339 aa21.08■□□□□ 0.97
HDAC4-211ENST00000494800 SLC3A2P08195 630 aaKnown RBP21.07■□□□□ 0.96
HDAC4-211ENST00000494800 CAP1Q01518 475 aa21.07■□□□□ 0.96
HDAC4-211ENST00000494800 ICA1Q05084 483 aa21.07■□□□□ 0.96
HDAC4-211ENST00000494800 IFNL3Q8IZI9 196 aa21.07■□□□□ 0.96
HDAC4-211ENST00000494800 RILPL2Q969X0 211 aa21.07■□□□□ 0.96
HDAC4-211ENST00000494800 SEC62Q99442 399 aaKnown RBP21.07■□□□□ 0.96
HDAC4-211ENST00000494800 OSBPL3Q9H4L5 887 aa21.07■□□□□ 0.96
HDAC4-211ENST00000494800 HELLSQ9NRZ9 838 aa21.07■□□□□ 0.96
HDAC4-211ENST00000494800 PTCH2Q9Y6C5 1203 aa21.07■□□□□ 0.96
HDAC4-211ENST00000494800 MYPNQ86TC9 1320 aa21.06■□□□□ 0.96
HDAC4-211ENST00000494800 USP17L15C9J2P7 530 aa21.06■□□□□ 0.96
HDAC4-211ENST00000494800 USP17L13C9JLJ4 530 aa21.06■□□□□ 0.96
HDAC4-211ENST00000494800 USP17L11C9JVI0 530 aa21.06■□□□□ 0.96
HDAC4-211ENST00000494800 USP17L18D6R9N7 530 aa21.06■□□□□ 0.96
HDAC4-211ENST00000494800 USP17L22D6RA61 530 aa21.06■□□□□ 0.96
HDAC4-211ENST00000494800 USP17L17D6RBQ6 530 aa21.06■□□□□ 0.96
HDAC4-211ENST00000494800 USP17L19D6RCP7 530 aa21.06■□□□□ 0.96
HDAC4-211ENST00000494800 USP17L20D6RJB6 530 aa21.06■□□□□ 0.96
HDAC4-211ENST00000494800 TNPO2O14787 897 aaKnown RBP21.06■□□□□ 0.96
HDAC4-211ENST00000494800 AKR1B1P15121 316 aa21.06■□□□□ 0.96
HDAC4-211ENST00000494800 GUCY1A2P33402 732 aa21.06■□□□□ 0.96
HDAC4-211ENST00000494800 USP17L24Q0WX57 530 aa21.06■□□□□ 0.96
HDAC4-211ENST00000494800 PLEKHM2Q8IWE5 1019 aa21.06■□□□□ 0.96
HDAC4-211ENST00000494800 RAET1EQ8TD07 263 aa21.06■□□□□ 0.96
HDAC4-211ENST00000494800 ACER1Q8TDN7 264 aa21.06■□□□□ 0.96
HDAC4-211ENST00000494800 COA7Q96BR5 231 aa21.06■□□□□ 0.96
HDAC4-211ENST00000494800 SOX10P56693 466 aa21.05■□□□□ 0.96
HDAC4-211ENST00000494800 HERVK_113P62684 666 aa21.05■□□□□ 0.96
HDAC4-211ENST00000494800 ARMC5Q96C12 935 aa21.05■□□□□ 0.96
HDAC4-211ENST00000494800 P2RX7Q99572 595 aaKnown RBP21.05■□□□□ 0.96
HDAC4-211ENST00000494800 KANSL2Q9H9L4 492 aa21.05■□□□□ 0.96
HDAC4-211ENST00000494800 EPB41L4AQ9HCS5 686 aaPredicted RBP21.05■□□□□ 0.96
HDAC4-211ENST00000494800 ROBO3Q96MS0 1386 aa21.05■□□□□ 0.96
HDAC4-211ENST00000494800 BAZ2AQ9UIF9 1905 aaKnown RBP21.05■□□□□ 0.96
HDAC4-211ENST00000494800 VCAM1P19320 739 aa21.04■□□□□ 0.96
HDAC4-211ENST00000494800 PDE4BQ07343 736 aa21.04■□□□□ 0.96
HDAC4-211ENST00000494800 CTGFP29279 349 aa21.03■□□□□ 0.96
HDAC4-211ENST00000494800 RGS19P49795 217 aa21.03■□□□□ 0.96
HDAC4-211ENST00000494800 MFAP1P55081 439 aaKnown RBP21.03■□□□□ 0.96
HDAC4-211ENST00000494800 MCMDC2Q4G0Z9 681 aa21.03■□□□□ 0.96
HDAC4-211ENST00000494800 CCAR1Q8IX12 1150 aaKnown RBP21.03■□□□□ 0.96
HDAC4-211ENST00000494800 ZNF444Q8N0Y2 327 aaPredicted RBP21.03■□□□□ 0.96
HDAC4-211ENST00000494800 STK11IPQ8N1F8 1099 aa21.03■□□□□ 0.96
HDAC4-211ENST00000494800 GPRC5AQ8NFJ5 357 aa21.03■□□□□ 0.96
HDAC4-211ENST00000494800 LPAR1Q92633 364 aa21.03■□□□□ 0.96
HDAC4-211ENST00000494800 MORF4L1Q9UBU8 362 aa21.03■□□□□ 0.96
HDAC4-211ENST00000494800 SMIM22K7EJ46 135 aa21.02■□□□□ 0.96
HDAC4-211ENST00000494800 ATP2B2Q01814 1243 aa21.02■□□□□ 0.96
HDAC4-211ENST00000494800 MLLT1Q03111 559 aaPredicted RBP21.02■□□□□ 0.96
HDAC4-211ENST00000494800 CATSPERGQ6ZRH7 1159 aa21.02■□□□□ 0.96
HDAC4-211ENST00000494800 RPAP3Q9H6T3 665 aaPredicted RBP21.02■□□□□ 0.96
HDAC4-211ENST00000494800 TMX2Q9Y320 296 aa21.02■□□□□ 0.96
HDAC4-211ENST00000494800 A0A1W2PRG0 241 aa21.01■□□□□ 0.95
HDAC4-211ENST00000494800 HIP1O00291 1037 aa21.01■□□□□ 0.95
HDAC4-211ENST00000494800 PRKCZQ05513 592 aa21.01■□□□□ 0.95
HDAC4-211ENST00000494800 CCDC129Q6ZRS4 1044 aa21.01■□□□□ 0.95
HDAC4-211ENST00000494800 TMEM106CQ9BVX2 250 aa21.01■□□□□ 0.95
HDAC4-211ENST00000494800 MYH8P13535 1937 aa21.01■□□□□ 0.95
HDAC4-211ENST00000494800 RASA1P20936 1047 aa21■□□□□ 0.95
HDAC4-211ENST00000494800 PPARAQ07869 468 aa21■□□□□ 0.95
HDAC4-211ENST00000494800 SLAIN1Q8ND83 568 aa21■□□□□ 0.95
HDAC4-211ENST00000494800 ZNF333Q96JL9 665 aa21■□□□□ 0.95
HDAC4-211ENST00000494800 FAM227BQ96M60 508 aa21■□□□□ 0.95
HDAC4-211ENST00000494800 PAGR1Q9BTK6 254 aa21■□□□□ 0.95
HDAC4-211ENST00000494800 TANGO6Q9C0B7 1094 aa21■□□□□ 0.95
HDAC4-211ENST00000494800 VCPKMTQ9H867 229 aa21■□□□□ 0.95
HDAC4-211ENST00000494800 CWC22Q9HCG8 908 aaKnown RBP21■□□□□ 0.95
HDAC4-211ENST00000494800 GOPCQ9HD26 462 aa21■□□□□ 0.95
HDAC4-211ENST00000494800 DIAPH3Q9NSV4 1193 aa21■□□□□ 0.95
HDAC4-211ENST00000494800 EEF2P13639 858 aaKnown RBP20.99■□□□□ 0.95
HDAC4-211ENST00000494800 SDSP20132 328 aa20.99■□□□□ 0.95
HDAC4-211ENST00000494800 GRK4P32298 578 aa20.99■□□□□ 0.95
HDAC4-211ENST00000494800 ERVK-9P63128 1117 aa20.99■□□□□ 0.95
HDAC4-211ENST00000494800 ERVK-24P63145 666 aa20.99■□□□□ 0.95
HDAC4-211ENST00000494800 CCNA1P78396 465 aa20.99■□□□□ 0.95
HDAC4-211ENST00000494800 NMIQ13287 307 aaPredicted RBP20.99■□□□□ 0.95
HDAC4-211ENST00000494800 SH3TC2Q8TF17 1288 aa20.99■□□□□ 0.95
HDAC4-211ENST00000494800 HOXC10Q9NYD6 342 aa20.99■□□□□ 0.95
HDAC4-211ENST00000494800 BIN2Q9UBW5 565 aaPredicted RBP20.99■□□□□ 0.95
HDAC4-211ENST00000494800 RABGAP1Q9Y3P9 1069 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms