RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 ZNF532Q9HCE3 1301 aa17.43■□□□□ 0.38
SDF4-207ENST00000494748 EIF3JO75822 258 aaKnown RBP17.43■□□□□ 0.38
SDF4-207ENST00000494748 ALX1Q15699 326 aa17.43■□□□□ 0.38
SDF4-207ENST00000494748 PACS2Q86VP3 889 aa17.43■□□□□ 0.38
SDF4-207ENST00000494748 PAGE5Q96GU1 130 aa17.43■□□□□ 0.38
SDF4-207ENST00000494748 WWC3Q9ULE0 1092 aa17.43■□□□□ 0.38
SDF4-207ENST00000494748 FAM205CA6NFA0 338 aa17.43■□□□□ 0.38
SDF4-207ENST00000494748 CDC25AP30304 524 aa17.43■□□□□ 0.38
SDF4-207ENST00000494748 NCAPH2Q6IBW4 605 aa17.43■□□□□ 0.38
SDF4-207ENST00000494748 NFXL1Q6ZNB6 911 aa17.43■□□□□ 0.38
SDF4-207ENST00000494748 CCDC51Q96ER9 411 aa17.43■□□□□ 0.38
SDF4-207ENST00000494748 EPSTI1Q96J88 318 aa17.43■□□□□ 0.38
SDF4-207ENST00000494748 PLA2G12BQ9BX93 195 aa17.43■□□□□ 0.38
SDF4-207ENST00000494748 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.43■□□□□ 0.38
SDF4-207ENST00000494748 ABHD10Q9NUJ1 306 aa17.43■□□□□ 0.38
SDF4-207ENST00000494748 WNT7AO00755 349 aa17.42■□□□□ 0.38
SDF4-207ENST00000494748 CCDC85AQ96PX6 553 aaPredicted RBP17.42■□□□□ 0.38
SDF4-207ENST00000494748 AATFQ9NY61 560 aaKnown RBP eCLIP17.42■□□□□ 0.38
SDF4-207ENST00000494748 NHSL1Q5SYE7 1610 aa17.42■□□□□ 0.38
SDF4-207ENST00000494748 PLCH1Q4KWH8 1693 aa17.42■□□□□ 0.38
SDF4-207ENST00000494748 CTDSPL2Q05D32 466 aa17.42■□□□□ 0.38
SDF4-207ENST00000494748 SLC12A7Q9Y666 1083 aa17.42■□□□□ 0.38
SDF4-207ENST00000494748 CTAGE15A4D2H0 777 aa17.42■□□□□ 0.38
SDF4-207ENST00000494748 CTAGE8P0CG41 777 aa17.42■□□□□ 0.38
SDF4-207ENST00000494748 PDE6AP16499 860 aa17.42■□□□□ 0.38
SDF4-207ENST00000494748 EARS2Q5JPH6 523 aaKnown RBP17.42■□□□□ 0.38
SDF4-207ENST00000494748 CTAGE6Q86UF2 777 aa17.42■□□□□ 0.38
SDF4-207ENST00000494748 CNGA4Q8IV77 575 aa17.42■□□□□ 0.38
SDF4-207ENST00000494748 CTAGE4Q8IX94 777 aa17.42■□□□□ 0.38
SDF4-207ENST00000494748 TBC1D2BQ9UPU7 963 aa17.42■□□□□ 0.38
SDF4-207ENST00000494748 ANKRD36CQ5JPF3 1778 aa17.42■□□□□ 0.38
SDF4-207ENST00000494748 LRRC10BA6NIK2 292 aa17.41■□□□□ 0.38
SDF4-207ENST00000494748 MAGEA9P43362 315 aa17.41■□□□□ 0.38
SDF4-207ENST00000494748 KLHL10Q6JEL2 608 aa17.41■□□□□ 0.38
SDF4-207ENST00000494748 CMTR1Q8N1G2 835 aaKnown RBP17.41■□□□□ 0.38
SDF4-207ENST00000494748 MYO1AQ9UBC5 1043 aa17.41■□□□□ 0.38
SDF4-207ENST00000494748 TNS2Q63HR2 1409 aa17.41■□□□□ 0.38
SDF4-207ENST00000494748 LRP5O75197 1615 aa17.41■□□□□ 0.38
SDF4-207ENST00000494748 EIF3CLB5ME19 914 aaKnown RBP17.41■□□□□ 0.38
SDF4-207ENST00000494748 TRAPPC11Q7Z392 1133 aa17.41■□□□□ 0.38
SDF4-207ENST00000494748 CRACR2BQ8N4Y2 399 aaPredicted RBP17.41■□□□□ 0.38
SDF4-207ENST00000494748 EIF3CQ99613 913 aaKnown RBP17.41■□□□□ 0.38
SDF4-207ENST00000494748 FAM204AQ9H8W3 233 aa17.41■□□□□ 0.38
SDF4-207ENST00000494748 LIMA1Q9UHB6 759 aaKnown RBP17.41■□□□□ 0.38
SDF4-207ENST00000494748 DLEC1Q9Y238 1755 aa17.41■□□□□ 0.38
SDF4-207ENST00000494748 WASF1Q92558 559 aa17.41■□□□□ 0.38
SDF4-207ENST00000494748 VIPAS39Q9H9C1 493 aa17.41■□□□□ 0.38
SDF4-207ENST00000494748 MED4Q9NPJ6 270 aa17.41■□□□□ 0.38
SDF4-207ENST00000494748 TRIM10Q9UDY6 481 aa17.41■□□□□ 0.38
SDF4-207ENST00000494748 MYO6Q9UM54 1294 aa17.41■□□□□ 0.38
SDF4-207ENST00000494748 TOGARAM1Q9Y4F4 1720 aa17.4■□□□□ 0.38
SDF4-207ENST00000494748 C1orf167Q5SNV9 1468 aa17.4■□□□□ 0.38
SDF4-207ENST00000494748 COBLO75128 1261 aa17.4■□□□□ 0.38
SDF4-207ENST00000494748 PHACTR2O75167 634 aa17.4■□□□□ 0.38
SDF4-207ENST00000494748 CORO7P57737 925 aa17.4■□□□□ 0.38
SDF4-207ENST00000494748 PIP4K2BP78356 416 aa17.4■□□□□ 0.38
SDF4-207ENST00000494748 KRT31Q15323 416 aa17.4■□□□□ 0.38
SDF4-207ENST00000494748 CTAGE1Q96RT6 745 aa17.4■□□□□ 0.38
SDF4-207ENST00000494748 IFIT3O14879 490 aaKnown RBP17.4■□□□□ 0.38
SDF4-207ENST00000494748 AFMP43652 599 aa17.4■□□□□ 0.38
SDF4-207ENST00000494748 TMTC1Q8IUR5 882 aa17.4■□□□□ 0.38
SDF4-207ENST00000494748 MKRN1Q9UHC7 482 aaKnown RBP17.4■□□□□ 0.38
SDF4-207ENST00000494748 APPP05067 770 aa17.39■□□□□ 0.38
SDF4-207ENST00000494748 TCIRG1Q13488 830 aa17.39■□□□□ 0.37
SDF4-207ENST00000494748 SYNE4Q8N205 404 aa17.39■□□□□ 0.37
SDF4-207ENST00000494748 IFNL3Q8IZI9 196 aa17.39■□□□□ 0.37
SDF4-207ENST00000494748 FAM89AQ96GI7 184 aa17.39■□□□□ 0.37
SDF4-207ENST00000494748 GSDMAQ96QA5 445 aa17.39■□□□□ 0.37
SDF4-207ENST00000494748 CABP5Q9NP86 173 aa17.39■□□□□ 0.37
SDF4-207ENST00000494748 HPCAL4Q9UM19 191 aa17.39■□□□□ 0.37
SDF4-207ENST00000494748 XDHP47989 1333 aa17.39■□□□□ 0.37
SDF4-207ENST00000494748 RNF40O75150 1001 aa17.38■□□□□ 0.37
SDF4-207ENST00000494748 ARID4AP29374 1257 aaPredicted RBP17.38■□□□□ 0.37
SDF4-207ENST00000494748 CCT6AP40227 531 aaKnown RBP17.38■□□□□ 0.37
SDF4-207ENST00000494748 USP14P54578 494 aa17.38■□□□□ 0.37
SDF4-207ENST00000494748 SAFBQ15424 915 aaKnown RBP eCLIP17.38■□□□□ 0.37
SDF4-207ENST00000494748 NOM1Q5C9Z4 860 aaKnown RBP17.38■□□□□ 0.37
SDF4-207ENST00000494748 TTLL11Q8NHH1 800 aa17.38■□□□□ 0.37
SDF4-207ENST00000494748 SYMPKQ92797 1274 aaKnown RBP17.38■□□□□ 0.37
SDF4-207ENST00000494748 CCDC102AQ96A19 550 aa17.38■□□□□ 0.37
SDF4-207ENST00000494748 GBP3Q9H0R5 595 aa17.38■□□□□ 0.37
SDF4-207ENST00000494748 DEXIO95424 95 aa17.38■□□□□ 0.37
SDF4-207ENST00000494748 PCCAP05165 728 aaPredicted RBP17.38■□□□□ 0.37
SDF4-207ENST00000494748 TRIM28Q13263 835 aaKnown RBP17.38■□□□□ 0.37
SDF4-207ENST00000494748 CHP1Q99653 195 aa17.38■□□□□ 0.37
SDF4-207ENST00000494748 DISP2A7MBM2 1401 aa17.38■□□□□ 0.37
SDF4-207ENST00000494748 SPATA31A3Q5VYP0 1347 aa17.38■□□□□ 0.37
SDF4-207ENST00000494748 IDH1O75874 414 aaKnown RBP17.38■□□□□ 0.37
SDF4-207ENST00000494748 TUBBP07437 444 aa17.38■□□□□ 0.37
SDF4-207ENST00000494748 RTN1Q16799 776 aa17.38■□□□□ 0.37
SDF4-207ENST00000494748 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.38■□□□□ 0.37
SDF4-207ENST00000494748 MTRQ99707 1265 aa17.38■□□□□ 0.37
SDF4-207ENST00000494748 PLEKHA4Q9H4M7 779 aa17.38■□□□□ 0.37
SDF4-207ENST00000494748 CTNND2Q9UQB3 1225 aa17.38■□□□□ 0.37
SDF4-207ENST00000494748 PSMD14O00487 310 aa17.37■□□□□ 0.37
SDF4-207ENST00000494748 PHKA1P46020 1223 aa17.37■□□□□ 0.37
SDF4-207ENST00000494748 TTF1Q15361 905 aaPredicted RBP17.37■□□□□ 0.37
SDF4-207ENST00000494748 E2F4Q16254 413 aa17.37■□□□□ 0.37
SDF4-207ENST00000494748 CYP26C1Q6V0L0 522 aa17.37■□□□□ 0.37
SDF4-207ENST00000494748 SLF1Q9BQI6 1058 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms