RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 TSPY3P0CV98 308 aa13.2□□□□□ -0.3
APTX-230ENST00000494649 TSPY8P0CW00 308 aa13.2□□□□□ -0.3
APTX-230ENST00000494649 CETPP11597 493 aa13.2□□□□□ -0.3
APTX-230ENST00000494649 TM4SF4P48230 202 aa13.2□□□□□ -0.3
APTX-230ENST00000494649 ICA1Q05084 483 aa13.2□□□□□ -0.3
APTX-230ENST00000494649 IMMTQ16891 758 aaKnown RBP13.2□□□□□ -0.3
APTX-230ENST00000494649 TMEM179Q6ZVK1 233 aa13.2□□□□□ -0.3
APTX-230ENST00000494649 LSG1Q9H089 658 aaKnown RBP13.2□□□□□ -0.3
APTX-230ENST00000494649 AS3MTQ9HBK9 375 aa13.2□□□□□ -0.3
APTX-230ENST00000494649 RBM8AQ9Y5S9 174 aaKnown RBP13.2□□□□□ -0.3
APTX-230ENST00000494649 MOGSQ13724 837 aa13.19□□□□□ -0.3
APTX-230ENST00000494649 SPICE1Q8N0Z3 855 aa13.19□□□□□ -0.3
APTX-230ENST00000494649 ZKSCAN3Q9BRR0 538 aa13.19□□□□□ -0.3
APTX-230ENST00000494649 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.19□□□□□ -0.3
APTX-230ENST00000494649 A0A0G2JLL6 359 aaPredicted RBP13.19□□□□□ -0.3
APTX-230ENST00000494649 USP17L10C9JJH3 530 aa13.19□□□□□ -0.3
APTX-230ENST00000494649 CYP21A2P08686 494 aa13.19□□□□□ -0.3
APTX-230ENST00000494649 CYP2C8P10632 490 aa13.19□□□□□ -0.3
APTX-230ENST00000494649 EEF2P13639 858 aaKnown RBP13.19□□□□□ -0.3
APTX-230ENST00000494649 BACE1P56817 501 aa13.19□□□□□ -0.3
APTX-230ENST00000494649 AKNAD1Q5T1N1 836 aa13.19□□□□□ -0.3
APTX-230ENST00000494649 COL13A1Q5TAT6 717 aaPredicted RBP13.19□□□□□ -0.3
APTX-230ENST00000494649 MFSD6Q6ZSS7 791 aa13.19□□□□□ -0.3
APTX-230ENST00000494649 PRRT2Q7Z6L0 340 aaPredicted RBP13.19□□□□□ -0.3
APTX-230ENST00000494649 SIAH1Q8IUQ4 282 aa13.19□□□□□ -0.3
APTX-230ENST00000494649 CEP95Q96GE4 821 aa13.19□□□□□ -0.3
APTX-230ENST00000494649 CCDC17Q96LX7 622 aa13.19□□□□□ -0.3
APTX-230ENST00000494649 ZNF287Q9HBT7 754 aa13.19□□□□□ -0.3
APTX-230ENST00000494649 ANAPC4Q9UJX5 808 aa13.19□□□□□ -0.3
APTX-230ENST00000494649 MTMR7Q9Y216 660 aa13.19□□□□□ -0.3
APTX-230ENST00000494649 B4E1Z4 1266 aa13.18□□□□□ -0.3
APTX-230ENST00000494649 PDHXO00330 501 aa13.18□□□□□ -0.3
APTX-230ENST00000494649 CXCL11O14625 94 aa13.18□□□□□ -0.3
APTX-230ENST00000494649 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
APTX-230ENST00000494649 MAP4K1Q92918 833 aa13.18□□□□□ -0.3
APTX-230ENST00000494649 CTNNA3Q9UI47 895 aa13.18□□□□□ -0.3
APTX-230ENST00000494649 ZMYM6O95789 1325 aa13.18□□□□□ -0.3
APTX-230ENST00000494649 LBX1P52954 281 aa13.17□□□□□ -0.3
APTX-230ENST00000494649 CRHR2Q13324 411 aa13.17□□□□□ -0.3
APTX-230ENST00000494649 TAF1CQ15572 869 aaPredicted RBP13.17□□□□□ -0.3
APTX-230ENST00000494649 KIAA1755Q5JYT7 1200 aa13.17□□□□□ -0.3
APTX-230ENST00000494649 GPAT2Q6NUI2 795 aa13.17□□□□□ -0.3
APTX-230ENST00000494649 LRRC47Q8N1G4 583 aaKnown RBP13.17□□□□□ -0.3
APTX-230ENST00000494649 WDR18Q9BV38 432 aa13.17□□□□□ -0.3
APTX-230ENST00000494649 EMILIN3Q9NT22 766 aa13.17□□□□□ -0.3
APTX-230ENST00000494649 CLIP2Q9UDT6 1046 aa13.17□□□□□ -0.3
APTX-230ENST00000494649 TESPA1A2RU30 521 aaPredicted RBP13.17□□□□□ -0.3
APTX-230ENST00000494649 KDM4AO75164 1064 aa13.17□□□□□ -0.3
APTX-230ENST00000494649 INHBEP58166 350 aa13.17□□□□□ -0.3
APTX-230ENST00000494649 STAG1Q8WVM7 1258 aa13.17□□□□□ -0.3
APTX-230ENST00000494649 TMOD4Q9NZQ9 345 aa13.17□□□□□ -0.3
APTX-230ENST00000494649 STX8Q9UNK0 236 aa13.17□□□□□ -0.3
APTX-230ENST00000494649 U3KPZ7 1027 aaPredicted RBP13.17□□□□□ -0.3
APTX-230ENST00000494649 PTPRFP10586 1907 aa13.17□□□□□ -0.3
APTX-230ENST00000494649 PEX10O60683 326 aa13.16□□□□□ -0.3
APTX-230ENST00000494649 COL9A3Q14050 684 aaPredicted RBP13.16□□□□□ -0.3
APTX-230ENST00000494649 RASGRP2Q7LDG7 609 aa13.16□□□□□ -0.3
APTX-230ENST00000494649 CHST3Q7LGC8 479 aa13.16□□□□□ -0.3
APTX-230ENST00000494649 KANSL2Q9H9L4 492 aa13.16□□□□□ -0.3
APTX-230ENST00000494649 IL17RBQ9NRM6 502 aa13.16□□□□□ -0.3
APTX-230ENST00000494649 CENPFP49454 3210 aa13.16□□□□□ -0.3
APTX-230ENST00000494649 OTUD7BQ6GQQ9 843 aa13.16□□□□□ -0.3
APTX-230ENST00000494649 STOX1Q6ZVD7 989 aa13.16□□□□□ -0.3
APTX-230ENST00000494649 FASTKD5Q7L8L6 764 aaKnown RBP13.16□□□□□ -0.3
APTX-230ENST00000494649 ARHGEF10LQ9HCE6 1279 aa13.16□□□□□ -0.3
APTX-230ENST00000494649 ORC4O43929 436 aa13.15□□□□□ -0.3
APTX-230ENST00000494649 VCAM1P19320 739 aa13.15□□□□□ -0.3
APTX-230ENST00000494649 NEDD1Q8NHV4 660 aa13.15□□□□□ -0.3
APTX-230ENST00000494649 NUP88Q99567 741 aaPredicted RBP13.15□□□□□ -0.3
APTX-230ENST00000494649 RNF41Q9H4P4 317 aaPredicted RBP13.15□□□□□ -0.3
APTX-230ENST00000494649 GINM1Q9NU53 330 aa13.15□□□□□ -0.3
APTX-230ENST00000494649 MTMR4Q9NYA4 1195 aa13.15□□□□□ -0.3
APTX-230ENST00000494649 CPA4Q9UI42 421 aa13.15□□□□□ -0.3
APTX-230ENST00000494649 ISY1Q9ULR0 285 aaKnown RBP13.15□□□□□ -0.3
APTX-230ENST00000494649 AGTPBP1Q9UPW5 1226 aa13.15□□□□□ -0.3
APTX-230ENST00000494649 LAMA4Q16363 1823 aa13.14□□□□□ -0.31
APTX-230ENST00000494649 SLC27A2O14975 620 aa13.14□□□□□ -0.31
APTX-230ENST00000494649 FGRP09769 529 aa13.14□□□□□ -0.31
APTX-230ENST00000494649 HSPA8P11142 646 aaKnown RBP13.14□□□□□ -0.31
APTX-230ENST00000494649 CREB3L3Q68CJ9 461 aa13.14□□□□□ -0.31
APTX-230ENST00000494649 USP17L2Q6R6M4 530 aa13.14□□□□□ -0.31
APTX-230ENST00000494649 ANKRD23Q86SG2 305 aa13.14□□□□□ -0.31
APTX-230ENST00000494649 REM2Q8IYK8 340 aaPredicted RBP13.14□□□□□ -0.31
APTX-230ENST00000494649 KIAA1683Q9H0B3 1180 aa13.14□□□□□ -0.31
APTX-230ENST00000494649 IGKV6D-41A0A0C4DH26 115 aa13.14□□□□□ -0.31
APTX-230ENST00000494649 C19orf81C9J6K1 198 aa13.14□□□□□ -0.31
APTX-230ENST00000494649 E7EWF7 191 aa13.14□□□□□ -0.31
APTX-230ENST00000494649 CAPN15O75808 1086 aa13.14□□□□□ -0.31
APTX-230ENST00000494649 SH3D19Q5HYK7 790 aa13.14□□□□□ -0.31
APTX-230ENST00000494649 PROCA1Q8NCQ7 364 aaPredicted RBP13.14□□□□□ -0.31
APTX-230ENST00000494649 SMCR8Q8TEV9 937 aaPredicted RBP13.14□□□□□ -0.31
APTX-230ENST00000494649 ESR2Q92731 530 aa13.14□□□□□ -0.31
APTX-230ENST00000494649 TBC1D2Q9BYX2 928 aa13.14□□□□□ -0.31
APTX-230ENST00000494649 TANGO6Q9C0B7 1094 aa13.14□□□□□ -0.31
APTX-230ENST00000494649 RPAP3Q9H6T3 665 aaPredicted RBP13.14□□□□□ -0.31
APTX-230ENST00000494649 ZSWIM5Q9P217 1185 aa13.14□□□□□ -0.31
APTX-230ENST00000494649 TMX2Q9Y320 296 aa13.14□□□□□ -0.31
APTX-230ENST00000494649 CA12O43570 354 aa13.13□□□□□ -0.31
APTX-230ENST00000494649 TTLL1O95922 423 aa13.13□□□□□ -0.31
APTX-230ENST00000494649 ALDH1A1P00352 501 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms