RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 CUL4BQ13620 913 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 CEP85LQ5SZL2 805 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 PAPD7Q5XG87 772 aaKnown RBP11.42□□□□□ -0.58
LINC00488-201ENST00000494582 FAM43BQ6ZT52 329 aaPredicted RBP11.42□□□□□ -0.58
LINC00488-201ENST00000494582 TMTC1Q8IUR5 882 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 CNGA4Q8IV77 575 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 PHKBQ93100 1093 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 ALG1Q9BT22 464 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.42□□□□□ -0.58
LINC00488-201ENST00000494582 NWD2Q9ULI1 1742 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 DIP2CQ9Y2E4 1556 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.42□□□□□ -0.58
LINC00488-201ENST00000494582 RCCD1A6NED2 376 aa11.41□□□□□ -0.58
LINC00488-201ENST00000494582 GOLGA8KD6RF30 607 aa11.41□□□□□ -0.58
LINC00488-201ENST00000494582 CPLX1O14810 134 aa11.41□□□□□ -0.58
LINC00488-201ENST00000494582 ACTN4O43707 911 aaKnown RBP11.41□□□□□ -0.58
LINC00488-201ENST00000494582 SSBP05455 408 aaKnown RBP eCLIP11.41□□□□□ -0.58
LINC00488-201ENST00000494582 MCM3P25205 808 aa11.41□□□□□ -0.58
LINC00488-201ENST00000494582 LSP1P33241 339 aa11.41□□□□□ -0.58
LINC00488-201ENST00000494582 RFX5P48382 616 aaPredicted RBP11.41□□□□□ -0.58
LINC00488-201ENST00000494582 PPARDQ03181 441 aa11.41□□□□□ -0.58
LINC00488-201ENST00000494582 ZMYM1Q5SVZ6 1142 aa11.41□□□□□ -0.58
LINC00488-201ENST00000494582 FBXL16Q8N461 479 aa11.41□□□□□ -0.58
LINC00488-201ENST00000494582 LINS1Q8NG48 757 aa11.41□□□□□ -0.58
LINC00488-201ENST00000494582 ANKRD24Q8TF21 1146 aa11.41□□□□□ -0.58
LINC00488-201ENST00000494582 ZNF473Q8WTR7 871 aaKnown RBP11.41□□□□□ -0.58
LINC00488-201ENST00000494582 SLC7A5Q01650 507 aa11.41□□□□□ -0.58
LINC00488-201ENST00000494582 MAP2K1Q02750 393 aaPredicted RBP11.41□□□□□ -0.58
LINC00488-201ENST00000494582 AIMP1Q12904 312 aaKnown RBP11.41□□□□□ -0.58
LINC00488-201ENST00000494582 IFT88Q13099 833 aa11.41□□□□□ -0.58
LINC00488-201ENST00000494582 E2F5Q15329 346 aa11.41□□□□□ -0.58
LINC00488-201ENST00000494582 SPATA1Q5VX52 437 aa11.41□□□□□ -0.58
LINC00488-201ENST00000494582 TMED8Q6PL24 325 aaPredicted RBP11.41□□□□□ -0.58
LINC00488-201ENST00000494582 SAMD1Q6SPF0 538 aaPredicted RBP11.41□□□□□ -0.58
LINC00488-201ENST00000494582 MB21D2Q8IYB1 491 aaPredicted RBP11.41□□□□□ -0.58
LINC00488-201ENST00000494582 JAKMIP2Q96AA8 810 aa11.41□□□□□ -0.58
LINC00488-201ENST00000494582 AIDAQ96BJ3 306 aa11.41□□□□□ -0.58
LINC00488-201ENST00000494582 LRRC1Q9BTT6 524 aa11.41□□□□□ -0.58
LINC00488-201ENST00000494582 DBF4Q9UBU7 674 aaPredicted RBP11.41□□□□□ -0.58
LINC00488-201ENST00000494582 KDM3BQ7LBC6 1761 aa11.4□□□□□ -0.58
LINC00488-201ENST00000494582 OVOS2A0A0G2JMS6 1433 aa11.4□□□□□ -0.58
LINC00488-201ENST00000494582 OPLAHO14841 1288 aa11.4□□□□□ -0.58
LINC00488-201ENST00000494582 NDUFA10O95299 355 aa11.4□□□□□ -0.58
LINC00488-201ENST00000494582 KRT14P02533 472 aa11.4□□□□□ -0.58
LINC00488-201ENST00000494582 HOXB7P09629 217 aa11.4□□□□□ -0.58
LINC00488-201ENST00000494582 TOB1P50616 345 aaPredicted RBP11.4□□□□□ -0.58
LINC00488-201ENST00000494582 PTPN12Q05209 780 aaKnown RBP11.4□□□□□ -0.58
LINC00488-201ENST00000494582 CRYMQ14894 314 aa11.4□□□□□ -0.58
LINC00488-201ENST00000494582 CYP26C1Q6V0L0 522 aa11.4□□□□□ -0.58
LINC00488-201ENST00000494582 SPATA20Q8TB22 786 aa11.4□□□□□ -0.58
LINC00488-201ENST00000494582 PAGR1Q9BTK6 254 aa11.4□□□□□ -0.58
LINC00488-201ENST00000494582 SENP2Q9HC62 589 aa11.4□□□□□ -0.58
LINC00488-201ENST00000494582 TPX2Q9ULW0 747 aaKnown RBP11.4□□□□□ -0.58
LINC00488-201ENST00000494582 EPN1Q9Y6I3 576 aaPredicted RBP11.4□□□□□ -0.58
LINC00488-201ENST00000494582 DUSP10Q9Y6W6 482 aa11.4□□□□□ -0.58
LINC00488-201ENST00000494582 SYNRGQ9UMZ2 1314 aa11.4□□□□□ -0.58
LINC00488-201ENST00000494582 A0A087X0B3 334 aa11.4□□□□□ -0.59
LINC00488-201ENST00000494582 EPB41P11171 864 aaKnown RBP11.4□□□□□ -0.59
LINC00488-201ENST00000494582 ERCC5P28715 1186 aaPredicted RBP11.4□□□□□ -0.59
LINC00488-201ENST00000494582 CLNS1AP54105 237 aaKnown RBP11.4□□□□□ -0.59
LINC00488-201ENST00000494582 GRIK3Q13003 919 aa11.4□□□□□ -0.59
LINC00488-201ENST00000494582 C6orf89Q6UWU4 347 aa11.4□□□□□ -0.59
LINC00488-201ENST00000494582 YTHDF3Q7Z739 585 aaKnown RBP11.4□□□□□ -0.59
LINC00488-201ENST00000494582 KRI1Q8N9T8 703 aaKnown RBP11.4□□□□□ -0.59
LINC00488-201ENST00000494582 CCDC51Q96ER9 411 aa11.4□□□□□ -0.59
LINC00488-201ENST00000494582 TRIM6Q9C030 488 aaPredicted RBP11.4□□□□□ -0.59
LINC00488-201ENST00000494582 LACRTQ9GZZ8 138 aa11.4□□□□□ -0.59
LINC00488-201ENST00000494582 EPN3Q9H201 632 aa11.4□□□□□ -0.59
LINC00488-201ENST00000494582 HELLSQ9NRZ9 838 aa11.4□□□□□ -0.59
LINC00488-201ENST00000494582 SMARCAL1Q9NZC9 954 aa11.4□□□□□ -0.59
LINC00488-201ENST00000494582 FBXO2Q9UK22 296 aaPredicted RBP11.4□□□□□ -0.59
LINC00488-201ENST00000494582 A2ML1A8K2U0 1454 aa11.4□□□□□ -0.59
LINC00488-201ENST00000494582 DNM1LO00429 736 aa11.39□□□□□ -0.59
LINC00488-201ENST00000494582 PPP1R12BO60237 982 aaPredicted RBP11.39□□□□□ -0.59
LINC00488-201ENST00000494582 KRT9P35527 623 aa11.39□□□□□ -0.59
LINC00488-201ENST00000494582 KRT31Q15323 416 aa11.39□□□□□ -0.59
LINC00488-201ENST00000494582 ACCSLQ4AC99 568 aa11.39□□□□□ -0.59
LINC00488-201ENST00000494582 ZIM3Q96PE6 472 aa11.39□□□□□ -0.59
LINC00488-201ENST00000494582 VPS16Q9H269 839 aa11.39□□□□□ -0.59
LINC00488-201ENST00000494582 HAUS2Q9NVX0 235 aa11.39□□□□□ -0.59
LINC00488-201ENST00000494582 DACH1Q9UI36 760 aa11.39□□□□□ -0.59
LINC00488-201ENST00000494582 ECM29Q5VYK3 1845 aa11.39□□□□□ -0.59
LINC00488-201ENST00000494582 PLEKHG3A1L390 1219 aa11.39□□□□□ -0.59
LINC00488-201ENST00000494582 PDE6BP35913 854 aa11.39□□□□□ -0.59
LINC00488-201ENST00000494582 NNTQ13423 1086 aa11.39□□□□□ -0.59
LINC00488-201ENST00000494582 PTGISQ16647 500 aa11.39□□□□□ -0.59
LINC00488-201ENST00000494582 CYB5D1Q6P9G0 228 aa11.39□□□□□ -0.59
LINC00488-201ENST00000494582 PARP9Q8IXQ6 854 aa11.39□□□□□ -0.59
LINC00488-201ENST00000494582 ELOA2Q8IYF1 753 aaPredicted RBP11.39□□□□□ -0.59
LINC00488-201ENST00000494582 MYCBPAPQ8TBZ2 947 aa11.39□□□□□ -0.59
LINC00488-201ENST00000494582 OSBP2Q969R2 916 aa11.39□□□□□ -0.59
LINC00488-201ENST00000494582 CCT8L2Q96SF2 557 aa11.39□□□□□ -0.59
LINC00488-201ENST00000494582 NUP88Q99567 741 aaPredicted RBP11.39□□□□□ -0.59
LINC00488-201ENST00000494582 ITIH6Q6UXX5 1313 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 ROBO2Q9HCK4 1378 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 PPP1R3GB7ZBB8 358 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 RPSAP08865 295 aaKnown RBP11.38□□□□□ -0.59
LINC00488-201ENST00000494582 HOXC9P31274 260 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 UBE3BQ7Z3V4 1068 aa11.38□□□□□ -0.59
LINC00488-201ENST00000494582 FUKQ8N0W3 1084 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms