RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 DDX27Q96GQ7 796 aaKnown RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 CFAP53Q96M91 514 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 NLRP3Q96P20 1036 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 CDC5LQ99459 802 aaKnown RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 CORO1BQ9BR76 489 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 PPP1R12CQ9BZL4 782 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 INCENPQ9NQS7 918 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 FANCLQ9NW38 375 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 UTP6Q9NYH9 597 aaKnown RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 IMPACTQ9P2X3 320 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 FBXO9Q9UK97 447 aaPredicted RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 RAB21Q9UL25 225 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 PAIP2BQ9ULR5 123 aaKnown RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 CTDP1Q9Y5B0 961 aaPredicted RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 ANKRD50Q9ULJ7 1429 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 KDM5DQ9BY66 1539 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 GOLGA6L9A6NEM1 432 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 F8VZ95 297 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 EIF3FO00303 357 aaPredicted RBP4.52□□□□□ -1.69
ATG3-207ENST00000494571 FAM200BP0CF97 657 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 TOP1P11387 765 aaKnown RBP4.52□□□□□ -1.69
ATG3-207ENST00000494571 ATP1A3P13637 1013 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 ATP5JP18859 108 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 PCK1P35558 622 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 INHBCP55103 352 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 ADKP55263 362 aaKnown RBP4.52□□□□□ -1.69
ATG3-207ENST00000494571 BPIFB4P59827 614 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 SMUG1Q53HV7 270 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 RNF220Q5VTB9 566 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 SND1Q7KZF4 910 aaKnown RBP eCLIP4.52□□□□□ -1.69
ATG3-207ENST00000494571 TBC1D1Q86TI0 1168 aaPredicted RBP4.52□□□□□ -1.69
ATG3-207ENST00000494571 LONP2Q86WA8 852 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 CCDC148Q8NFR7 591 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 SPIRE2Q8WWL2 714 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 KIFC2Q96AC6 838 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 C8orf76Q96K31 380 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 CAPZA3Q96KX2 299 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 SDF4Q9BRK5 362 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 KCND1Q9NSA2 647 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 MRGBPQ9NV56 204 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 NOP53Q9NZM5 478 aaKnown RBP4.52□□□□□ -1.69
ATG3-207ENST00000494571 SWAP70Q9UH65 585 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 ZNF510Q9Y2H8 683 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 MSH6P52701 1360 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 TTC21BQ7Z4L5 1316 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 KIF5CO60282 957 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 DIAPH1O60610 1272 aaKnown RBP4.52□□□□□ -1.69
ATG3-207ENST00000494571 ABL1P00519 1130 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 HPDP32754 393 aaPredicted RBP4.52□□□□□ -1.69
ATG3-207ENST00000494571 ZC3H6P61129 1189 aaKnown RBP4.52□□□□□ -1.69
ATG3-207ENST00000494571 BLMHQ13867 455 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 MTF1Q14872 753 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 DIXDC1Q155Q3 683 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 LONRF3Q496Y0 759 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 KANK3Q6NY19 840 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 CAPN12Q6ZSI9 719 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 CCDC170Q8IYT3 715 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 AFAP1Q8N556 730 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 MSANTD4Q8NCY6 345 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 COG1Q8WTW3 980 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 LEO1Q8WVC0 666 aaPredicted RBP4.52□□□□□ -1.69
ATG3-207ENST00000494571 ARL8AQ96BM9 186 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 CCT8L2Q96SF2 557 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 TAOK3Q9H2K8 898 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 CDC23Q9UJX2 597 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 CHMP2BQ9UQN3 213 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 TMA7Q9Y2S6 64 aaKnown RBP4.52□□□□□ -1.69
ATG3-207ENST00000494571 ZNF518AQ6AHZ1 1483 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 FYCO1Q9BQS8 1478 aa4.52□□□□□ -1.69
ATG3-207ENST00000494571 NPHP3Q7Z494 1330 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 LRP5O75197 1615 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 MYO3AQ8NEV4 1616 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 TMEM232C9JQI7 657 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 HNRNPRO43390 633 aaKnown RBP4.51□□□□□ -1.69
ATG3-207ENST00000494571 SCG2P13521 617 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 RPL13P26373 211 aaKnown RBP4.51□□□□□ -1.69
ATG3-207ENST00000494571 ALDH3A1P30838 453 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 LSP1P33241 339 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 SCTRP47872 440 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 TUFMP49411 452 aaKnown RBP4.51□□□□□ -1.69
ATG3-207ENST00000494571 GNAQP50148 359 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 ELF3P78545 371 aaPredicted RBP4.51□□□□□ -1.69
ATG3-207ENST00000494571 IFFO1Q0D2I5 559 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 MTX1Q13505 466 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 DPCR1Q3MIW9 517 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 PI16Q6UXB8 463 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 CCDC73Q6ZRK6 1079 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 RUFY3Q7L099 469 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 SPATS2Q86XZ4 545 aaKnown RBP4.51□□□□□ -1.69
ATG3-207ENST00000494571 SPICE1Q8N0Z3 855 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 FNBP4Q8N3X1 1017 aaPredicted RBP4.51□□□□□ -1.69
ATG3-207ENST00000494571 CNBD1Q8NA66 436 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 CXorf38Q8TB03 319 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 AGAP11Q8TF27 550 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 ARHGAP45Q92619 1136 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 PRCCQ92733 491 aaPredicted RBP4.51□□□□□ -1.69
ATG3-207ENST00000494571 OPTNQ96CV9 577 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 PGBD1Q96JS3 809 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 NDNQ99608 321 aa4.51□□□□□ -1.69
ATG3-207ENST00000494571 SELENOOQ9BVL4 669 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms