RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 C7orf43Q8WVR3 580 aa12.75□□□□□ -0.37
ZIC4-216ENST00000494569 PRPF3O43395 683 aaKnown RBP12.74□□□□□ -0.37
ZIC4-216ENST00000494569 DEXIO95424 95 aa12.74□□□□□ -0.37
ZIC4-216ENST00000494569 CPLX2Q6PUV4 134 aaKnown RBP12.74□□□□□ -0.37
ZIC4-216ENST00000494569 FMR1NBQ8N0W7 255 aaPredicted RBP12.74□□□□□ -0.37
ZIC4-216ENST00000494569 CERS5Q8N5B7 392 aa12.74□□□□□ -0.37
ZIC4-216ENST00000494569 ANP32BQ92688 251 aaKnown RBP12.74□□□□□ -0.37
ZIC4-216ENST00000494569 UBAC1Q9BSL1 405 aa12.74□□□□□ -0.37
ZIC4-216ENST00000494569 PLIN4Q96Q06 1357 aa12.74□□□□□ -0.37
ZIC4-216ENST00000494569 CCDC196A0A1B0GTZ2 297 aa12.74□□□□□ -0.37
ZIC4-216ENST00000494569 ERICH2A1L162 156 aa12.74□□□□□ -0.37
ZIC4-216ENST00000494569 NPY5RQ15761 445 aa12.74□□□□□ -0.37
ZIC4-216ENST00000494569 WASF1Q92558 559 aa12.74□□□□□ -0.37
ZIC4-216ENST00000494569 RBM28Q9NW13 759 aaKnown RBP12.74□□□□□ -0.37
ZIC4-216ENST00000494569 PIM2Q9P1W9 311 aa12.74□□□□□ -0.37
ZIC4-216ENST00000494569 HPSEQ9Y251 543 aa12.74□□□□□ -0.37
ZIC4-216ENST00000494569 CNTNAP5Q8WYK1 1306 aa12.74□□□□□ -0.37
ZIC4-216ENST00000494569 BAG3O95817 575 aa12.73□□□□□ -0.37
ZIC4-216ENST00000494569 CALM1P0DP23 149 aa12.73□□□□□ -0.37
ZIC4-216ENST00000494569 CALM2P0DP24 149 aa12.73□□□□□ -0.37
ZIC4-216ENST00000494569 CALM3P0DP25 149 aa12.73□□□□□ -0.37
ZIC4-216ENST00000494569 SLC39A14Q15043 492 aa12.73□□□□□ -0.37
ZIC4-216ENST00000494569 TMTC3Q6ZXV5 915 aa12.73□□□□□ -0.37
ZIC4-216ENST00000494569 NUP62CLQ9H1M0 184 aa12.73□□□□□ -0.37
ZIC4-216ENST00000494569 PPP6R2O75170 966 aa12.73□□□□□ -0.37
ZIC4-216ENST00000494569 PRDM1O75626 825 aa12.73□□□□□ -0.37
ZIC4-216ENST00000494569 BTDP43251 543 aa12.73□□□□□ -0.37
ZIC4-216ENST00000494569 FKBP1AP62942 108 aaKnown RBP12.73□□□□□ -0.37
ZIC4-216ENST00000494569 ANO1Q5XXA6 986 aa12.73□□□□□ -0.37
ZIC4-216ENST00000494569 C16orf86Q6ZW13 317 aa12.73□□□□□ -0.37
ZIC4-216ENST00000494569 KCNG4Q8TDN1 519 aa12.73□□□□□ -0.37
ZIC4-216ENST00000494569 TNFRSF25Q93038 417 aa12.73□□□□□ -0.37
ZIC4-216ENST00000494569 SLC26A6Q9BXS9 759 aa12.73□□□□□ -0.37
ZIC4-216ENST00000494569 FOXP1Q9H334 677 aaPredicted RBP12.73□□□□□ -0.37
ZIC4-216ENST00000494569 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.73□□□□□ -0.37
ZIC4-216ENST00000494569 GOLGB1Q14789 3259 aaKnown RBP12.73□□□□□ -0.37
ZIC4-216ENST00000494569 TOB1P50616 345 aaPredicted RBP12.73□□□□□ -0.37
ZIC4-216ENST00000494569 OLFM4Q6UX06 510 aa12.73□□□□□ -0.37
ZIC4-216ENST00000494569 SYNE3Q6ZMZ3 975 aa12.73□□□□□ -0.37
ZIC4-216ENST00000494569 SMC1BQ8NDV3 1235 aa12.73□□□□□ -0.37
ZIC4-216ENST00000494569 FLT1P17948 1338 aa12.73□□□□□ -0.37
ZIC4-216ENST00000494569 NMT2O60551 498 aa12.72□□□□□ -0.37
ZIC4-216ENST00000494569 OFD1O75665 1012 aa12.72□□□□□ -0.37
ZIC4-216ENST00000494569 PLCD1P51178 756 aa12.72□□□□□ -0.37
ZIC4-216ENST00000494569 IQCB1Q15051 598 aa12.72□□□□□ -0.37
ZIC4-216ENST00000494569 IFIT1BQ5T764 474 aaKnown RBP12.72□□□□□ -0.37
ZIC4-216ENST00000494569 COL13A1Q5TAT6 717 aaPredicted RBP12.72□□□□□ -0.37
ZIC4-216ENST00000494569 DGKHQ86XP1 1220 aa12.72□□□□□ -0.37
ZIC4-216ENST00000494569 PHF20Q9BVI0 1012 aa12.72□□□□□ -0.37
ZIC4-216ENST00000494569 RBBP6Q7Z6E9 1792 aaKnown RBP12.72□□□□□ -0.37
ZIC4-216ENST00000494569 MAP3K11Q16584 847 aa12.72□□□□□ -0.37
ZIC4-216ENST00000494569 IQCA1Q86XH1 822 aa12.72□□□□□ -0.37
ZIC4-216ENST00000494569 CCAR1Q8IX12 1150 aaKnown RBP12.72□□□□□ -0.37
ZIC4-216ENST00000494569 MCM9Q9NXL9 1143 aa12.72□□□□□ -0.37
ZIC4-216ENST00000494569 DAGLAQ9Y4D2 1042 aa12.72□□□□□ -0.37
ZIC4-216ENST00000494569 WDHD1O75717 1129 aaPredicted RBP12.72□□□□□ -0.37
ZIC4-216ENST00000494569 PLEKHA8P1O95397 391 aa12.72□□□□□ -0.37
ZIC4-216ENST00000494569 SLC3A2P08195 630 aaKnown RBP12.72□□□□□ -0.37
ZIC4-216ENST00000494569 RASA1P20936 1047 aa12.72□□□□□ -0.37
ZIC4-216ENST00000494569 MSNP26038 577 aaKnown RBP12.72□□□□□ -0.37
ZIC4-216ENST00000494569 FAM160A1Q05DH4 1040 aa12.72□□□□□ -0.37
ZIC4-216ENST00000494569 PDE4BQ07343 736 aa12.72□□□□□ -0.37
ZIC4-216ENST00000494569 DALRD3Q5D0E6 543 aaKnown RBP12.72□□□□□ -0.37
ZIC4-216ENST00000494569 MFSD14BQ5SR56 506 aa12.72□□□□□ -0.37
ZIC4-216ENST00000494569 STK11IPQ8N1F8 1099 aa12.72□□□□□ -0.37
ZIC4-216ENST00000494569 POLR3DP05423 398 aaPredicted RBP12.71□□□□□ -0.37
ZIC4-216ENST00000494569 GABPAQ06546 454 aa12.71□□□□□ -0.37
ZIC4-216ENST00000494569 MPNDQ8N594 471 aa12.71□□□□□ -0.37
ZIC4-216ENST00000494569 FAM47AQ5JRC9 791 aa12.71□□□□□ -0.38
ZIC4-216ENST00000494569 PLA2G4DQ86XP0 818 aa12.71□□□□□ -0.38
ZIC4-216ENST00000494569 NOSTRINQ8IVI9 506 aa12.71□□□□□ -0.38
ZIC4-216ENST00000494569 SRBD1Q8N5C6 995 aaKnown RBP12.71□□□□□ -0.38
ZIC4-216ENST00000494569 TGFBRAP1Q8WUH2 860 aa12.71□□□□□ -0.38
ZIC4-216ENST00000494569 DYNLL2Q96FJ2 89 aa12.71□□□□□ -0.38
ZIC4-216ENST00000494569 MRIQ9BWK5 157 aa12.71□□□□□ -0.38
ZIC4-216ENST00000494569 SPTLC2O15270 562 aa12.7□□□□□ -0.38
ZIC4-216ENST00000494569 PLCG2P16885 1265 aa12.7□□□□□ -0.38
ZIC4-216ENST00000494569 CATIPQ7Z7H3 387 aa12.7□□□□□ -0.38
ZIC4-216ENST00000494569 TOMM22Q9NS69 142 aa12.7□□□□□ -0.38
ZIC4-216ENST00000494569 MYH4Q9Y623 1939 aa12.7□□□□□ -0.38
ZIC4-216ENST00000494569 TYRO3Q06418 890 aa12.7□□□□□ -0.38
ZIC4-216ENST00000494569 HSP90AA2PQ14568 343 aaPredicted RBP12.7□□□□□ -0.38
ZIC4-216ENST00000494569 SLC35G1Q2M3R5 365 aa12.7□□□□□ -0.38
ZIC4-216ENST00000494569 SLF2Q8IX21 1173 aa12.7□□□□□ -0.38
ZIC4-216ENST00000494569 ELOA2Q8IYF1 753 aaPredicted RBP12.7□□□□□ -0.38
ZIC4-216ENST00000494569 TNS4Q8IZW8 715 aa12.7□□□□□ -0.38
ZIC4-216ENST00000494569 CMTR1Q8N1G2 835 aaKnown RBP12.7□□□□□ -0.38
ZIC4-216ENST00000494569 CMA1P23946 247 aa12.7□□□□□ -0.38
ZIC4-216ENST00000494569 USP5P45974 858 aa12.7□□□□□ -0.38
ZIC4-216ENST00000494569 CEBPZQ03701 1054 aaKnown RBP12.7□□□□□ -0.38
ZIC4-216ENST00000494569 MRPS27Q92552 414 aaKnown RBP12.7□□□□□ -0.38
ZIC4-216ENST00000494569 TNMDQ9H2S6 317 aa12.7□□□□□ -0.38
ZIC4-216ENST00000494569 ZKSCAN5Q9Y2L8 839 aa12.7□□□□□ -0.38
ZIC4-216ENST00000494569 IGKV6D-41A0A0C4DH26 115 aa12.69□□□□□ -0.38
ZIC4-216ENST00000494569 C6orf229H3BNL8 230 aa12.69□□□□□ -0.38
ZIC4-216ENST00000494569 CTAGE5O15320 804 aa12.69□□□□□ -0.38
ZIC4-216ENST00000494569 GRM4Q14833 912 aa12.69□□□□□ -0.38
ZIC4-216ENST00000494569 CCDC178Q5BJE1 867 aa12.69□□□□□ -0.38
ZIC4-216ENST00000494569 HSD3B7Q9H2F3 369 aa12.69□□□□□ -0.38
ZIC4-216ENST00000494569 RNF181Q9P0P0 153 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms