RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 CCDC178Q5BJE1 867 aa19.12■□□□□ 0.65
ATG4B-225ENST00000494465 CC2D2BQ6DHV5 1058 aa19.12■□□□□ 0.65
ATG4B-225ENST00000494465 ADALQ6DHV7 355 aa19.12■□□□□ 0.65
ATG4B-225ENST00000494465 CDC42EP5Q6NZY7 148 aa19.12■□□□□ 0.65
ATG4B-225ENST00000494465 DIS3L2Q8IYB7 885 aaKnown RBP19.12■□□□□ 0.65
ATG4B-225ENST00000494465 RNF214Q8ND24 703 aa19.12■□□□□ 0.65
ATG4B-225ENST00000494465 PNMA1Q8ND90 353 aa19.12■□□□□ 0.65
ATG4B-225ENST00000494465 ENGASEQ8NFI3 743 aa19.12■□□□□ 0.65
ATG4B-225ENST00000494465 TEKT1Q969V4 418 aa19.12■□□□□ 0.65
ATG4B-225ENST00000494465 MAP3K14Q99558 947 aa19.12■□□□□ 0.65
ATG4B-225ENST00000494465 KAT14Q9H8E8 782 aa19.12■□□□□ 0.65
ATG4B-225ENST00000494465 USP40Q9NVE5 1235 aa19.12■□□□□ 0.65
ATG4B-225ENST00000494465 MYH8P13535 1937 aa19.12■□□□□ 0.65
ATG4B-225ENST00000494465 hCG_1642624A0A1W2PR95 340 aa19.12■□□□□ 0.65
ATG4B-225ENST00000494465 SPTLC2O15270 562 aa19.12■□□□□ 0.65
ATG4B-225ENST00000494465 GABPAQ06546 454 aa19.12■□□□□ 0.65
ATG4B-225ENST00000494465 PICALMQ13492 652 aa19.12■□□□□ 0.65
ATG4B-225ENST00000494465 NOSTRINQ8IVI9 506 aa19.12■□□□□ 0.65
ATG4B-225ENST00000494465 FOXP1Q9H334 677 aaPredicted RBP19.12■□□□□ 0.65
ATG4B-225ENST00000494465 PSME4Q14997 1843 aa19.12■□□□□ 0.65
ATG4B-225ENST00000494465 C21orf2O43822 256 aa19.11■□□□□ 0.65
ATG4B-225ENST00000494465 CRKP46108 304 aa19.11■□□□□ 0.65
ATG4B-225ENST00000494465 GNL2Q13823 731 aaKnown RBP19.11■□□□□ 0.65
ATG4B-225ENST00000494465 SLC39A14Q15043 492 aa19.11■□□□□ 0.65
ATG4B-225ENST00000494465 PTPAQ15257 358 aa19.11■□□□□ 0.65
ATG4B-225ENST00000494465 MAP3K11Q16584 847 aa19.11■□□□□ 0.65
ATG4B-225ENST00000494465 NEDD1Q8NHV4 660 aa19.11■□□□□ 0.65
ATG4B-225ENST00000494465 ZDHHC15Q96MV8 337 aa19.11■□□□□ 0.65
ATG4B-225ENST00000494465 MRIQ9BWK5 157 aa19.11■□□□□ 0.65
ATG4B-225ENST00000494465 A0A1W2PQ27 194 aa19.11■□□□□ 0.65
ATG4B-225ENST00000494465 A0A1W2PQ64 194 aa19.11■□□□□ 0.65
ATG4B-225ENST00000494465 A0A1W2PQD8 194 aa19.11■□□□□ 0.65
ATG4B-225ENST00000494465 KCNA3P22001 575 aa19.11■□□□□ 0.65
ATG4B-225ENST00000494465 AKAP17AQ02040 695 aaKnown RBP19.11■□□□□ 0.65
ATG4B-225ENST00000494465 SF3A1Q15459 793 aaKnown RBP19.11■□□□□ 0.65
ATG4B-225ENST00000494465 SLC16A10Q8TF71 515 aa19.11■□□□□ 0.65
ATG4B-225ENST00000494465 TNMDQ9H2S6 317 aa19.11■□□□□ 0.65
ATG4B-225ENST00000494465 VPS54Q9P1Q0 977 aa19.11■□□□□ 0.65
ATG4B-225ENST00000494465 SAFBQ15424 915 aaKnown RBP eCLIP19.1■□□□□ 0.65
ATG4B-225ENST00000494465 AXDND1Q5T1B0 1012 aaPredicted RBP19.1■□□□□ 0.65
ATG4B-225ENST00000494465 KIAA0825Q8IV33 1275 aa19.1■□□□□ 0.65
ATG4B-225ENST00000494465 OXER1Q8TDS5 423 aa19.1■□□□□ 0.65
ATG4B-225ENST00000494465 TMEM47Q9BQJ4 181 aa19.1■□□□□ 0.65
ATG4B-225ENST00000494465 PHF20Q9BVI0 1012 aa19.1■□□□□ 0.65
ATG4B-225ENST00000494465 PCDHAC2Q9Y5I4 1007 aa19.1■□□□□ 0.65
ATG4B-225ENST00000494465 NOVP48745 357 aa19.1■□□□□ 0.65
ATG4B-225ENST00000494465 TOB1P50616 345 aaPredicted RBP19.1■□□□□ 0.65
ATG4B-225ENST00000494465 NR5A1Q13285 461 aa19.1■□□□□ 0.65
ATG4B-225ENST00000494465 GRM4Q14833 912 aa19.09■□□□□ 0.65
ATG4B-225ENST00000494465 TTLL6Q8N841 843 aa19.09■□□□□ 0.65
ATG4B-225ENST00000494465 FSIP1Q8NA03 581 aa19.09■□□□□ 0.65
ATG4B-225ENST00000494465 PPP1R9BQ96SB3 815 aa19.09■□□□□ 0.65
ATG4B-225ENST00000494465 SIPA1L1O43166 1804 aa19.09■□□□□ 0.65
ATG4B-225ENST00000494465 YDJCA8MPS7 323 aa19.08■□□□□ 0.65
ATG4B-225ENST00000494465 KIF5BP33176 963 aa19.08■□□□□ 0.65
ATG4B-225ENST00000494465 FAM160A1Q05DH4 1040 aa19.08■□□□□ 0.65
ATG4B-225ENST00000494465 STAG2Q8N3U4 1231 aa19.08■□□□□ 0.65
ATG4B-225ENST00000494465 SUPT20HQ8NEM7 779 aa19.08■□□□□ 0.65
ATG4B-225ENST00000494465 MRPS27Q92552 414 aaKnown RBP19.08■□□□□ 0.65
ATG4B-225ENST00000494465 OSBPL5Q9H0X9 879 aaPredicted RBP19.08■□□□□ 0.65
ATG4B-225ENST00000494465 MAD2L2Q9UI95 211 aa19.08■□□□□ 0.65
ATG4B-225ENST00000494465 PLIN4Q96Q06 1357 aa19.08■□□□□ 0.65
ATG4B-225ENST00000494465 HDLBPQ00341 1268 aaKnown RBP19.08■□□□□ 0.64
ATG4B-225ENST00000494465 NFIAQ12857 509 aa19.08■□□□□ 0.64
ATG4B-225ENST00000494465 NPY5RQ15761 445 aa19.08■□□□□ 0.64
ATG4B-225ENST00000494465 CKAP2LQ8IYA6 745 aa19.08■□□□□ 0.64
ATG4B-225ENST00000494465 FMR1NBQ8N0W7 255 aaPredicted RBP19.08■□□□□ 0.64
ATG4B-225ENST00000494465 STX8Q9UNK0 236 aa19.08■□□□□ 0.64
ATG4B-225ENST00000494465 VEGFAP15692 232 aaPredicted RBP19.07■□□□□ 0.64
ATG4B-225ENST00000494465 DPEP1P16444 411 aa19.07■□□□□ 0.64
ATG4B-225ENST00000494465 SLC35G1Q2M3R5 365 aa19.07■□□□□ 0.64
ATG4B-225ENST00000494465 CCDC73Q6ZRK6 1079 aa19.07■□□□□ 0.64
ATG4B-225ENST00000494465 PPP6R2O75170 966 aa19.07■□□□□ 0.64
ATG4B-225ENST00000494465 CCDC173Q0VFZ6 552 aa19.07■□□□□ 0.64
ATG4B-225ENST00000494465 CEP95Q96GE4 821 aa19.07■□□□□ 0.64
ATG4B-225ENST00000494465 PPIP5K2O43314 1243 aa19.06■□□□□ 0.64
ATG4B-225ENST00000494465 CCDC192P0DO97 292 aa19.06■□□□□ 0.64
ATG4B-225ENST00000494465 XBP1P17861 261 aa19.06■□□□□ 0.64
ATG4B-225ENST00000494465 MARCKSP29966 332 aaPredicted RBP19.06■□□□□ 0.64
ATG4B-225ENST00000494465 PFKFB3Q16875 520 aaPredicted RBP19.06■□□□□ 0.64
ATG4B-225ENST00000494465 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.06■□□□□ 0.64
ATG4B-225ENST00000494465 GREB1LQ9C091 1923 aaPredicted RBP19.06■□□□□ 0.64
ATG4B-225ENST00000494465 COL4A5P29400 1685 aa19.06■□□□□ 0.64
ATG4B-225ENST00000494465 A0A1B0GVL5 298 aa19.06■□□□□ 0.64
ATG4B-225ENST00000494465 SCG2P13521 617 aa19.06■□□□□ 0.64
ATG4B-225ENST00000494465 NDUFA8P51970 172 aa19.06■□□□□ 0.64
ATG4B-225ENST00000494465 PALM3A6NDB9 673 aaPredicted RBP19.05■□□□□ 0.64
ATG4B-225ENST00000494465 TYRO3Q06418 890 aa19.05■□□□□ 0.64
ATG4B-225ENST00000494465 GRIPAP1Q4V328 841 aa19.05■□□□□ 0.64
ATG4B-225ENST00000494465 CCDC93Q567U6 631 aa19.05■□□□□ 0.64
ATG4B-225ENST00000494465 ZFPM1Q8IX07 1006 aa19.05■□□□□ 0.64
ATG4B-225ENST00000494465 PDLIM2Q96JY6 352 aa19.05■□□□□ 0.64
ATG4B-225ENST00000494465 SERPINB13Q9UIV8 391 aa19.05■□□□□ 0.64
ATG4B-225ENST00000494465 SERPINA10Q9UK55 444 aa19.05■□□□□ 0.64
ATG4B-225ENST00000494465 MRVI1Q9Y6F6 885 aa19.05■□□□□ 0.64
ATG4B-225ENST00000494465 CMA1P23946 247 aa19.05■□□□□ 0.64
ATG4B-225ENST00000494465 RILPL1Q5EBL4 403 aa19.05■□□□□ 0.64
ATG4B-225ENST00000494465 RASGRP2Q7LDG7 609 aa19.05■□□□□ 0.64
ATG4B-225ENST00000494465 TNFRSF25Q93038 417 aa19.05■□□□□ 0.64
ATG4B-225ENST00000494465 PSMD1Q99460 953 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms