RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 NPLOC4Q8TAT6 608 aa8.53□□□□□ -1.04
FN1-225ENST00000494446 KHSRPQ92945 711 aaKnown RBP eCLIP8.53□□□□□ -1.04
FN1-225ENST00000494446 MSRAQ9UJ68 235 aa8.53□□□□□ -1.04
FN1-225ENST00000494446 SPTBN4Q9H254 2564 aa8.53□□□□□ -1.04
FN1-225ENST00000494446 WDFY4Q6ZS81 3184 aa8.53□□□□□ -1.04
FN1-225ENST00000494446 SIPA1L1O43166 1804 aa8.52□□□□□ -1.04
FN1-225ENST00000494446 CYBAP13498 195 aa8.52□□□□□ -1.05
FN1-225ENST00000494446 SLC5A1P13866 664 aa8.52□□□□□ -1.05
FN1-225ENST00000494446 FGFR2P21802 821 aa8.52□□□□□ -1.05
FN1-225ENST00000494446 CCNA1P78396 465 aa8.52□□□□□ -1.05
FN1-225ENST00000494446 LRRC41Q15345 812 aa8.52□□□□□ -1.05
FN1-225ENST00000494446 C1orf53Q5VUE5 145 aa8.52□□□□□ -1.05
FN1-225ENST00000494446 KLHDC4Q8TBB5 520 aa8.52□□□□□ -1.05
FN1-225ENST00000494446 GTF3C2Q8WUA4 911 aaPredicted RBP8.52□□□□□ -1.05
FN1-225ENST00000494446 SUCLG2Q96I99 432 aa8.52□□□□□ -1.05
FN1-225ENST00000494446 UIMC1Q96RL1 719 aa8.52□□□□□ -1.05
FN1-225ENST00000494446 WDR18Q9BV38 432 aa8.52□□□□□ -1.05
FN1-225ENST00000494446 NKX2-4Q9H2Z4 354 aa8.52□□□□□ -1.05
FN1-225ENST00000494446 SLC28A3Q9HAS3 691 aa8.52□□□□□ -1.05
FN1-225ENST00000494446 IVNS1ABPQ9Y6Y0 642 aa8.52□□□□□ -1.05
FN1-225ENST00000494446 ZDBF2Q9HCK1 2354 aa8.52□□□□□ -1.05
FN1-225ENST00000494446 KIF16BQ96L93 1317 aa8.52□□□□□ -1.05
FN1-225ENST00000494446 C19orf81C9J6K1 198 aa8.51□□□□□ -1.05
FN1-225ENST00000494446 SEPT4O43236 478 aa8.51□□□□□ -1.05
FN1-225ENST00000494446 BTDP43251 543 aa8.51□□□□□ -1.05
FN1-225ENST00000494446 RALBP1Q15311 655 aa8.51□□□□□ -1.05
FN1-225ENST00000494446 RAB30Q15771 203 aa8.51□□□□□ -1.05
FN1-225ENST00000494446 TMEM240Q5SV17 173 aa8.51□□□□□ -1.05
FN1-225ENST00000494446 PRAMEF19Q5SWL8 479 aa8.51□□□□□ -1.05
FN1-225ENST00000494446 DPP9Q86TI2 863 aa8.51□□□□□ -1.05
FN1-225ENST00000494446 DZIP1Q86YF9 867 aaKnown RBP8.51□□□□□ -1.05
FN1-225ENST00000494446 SLC44A5Q8NCS7 719 aa8.51□□□□□ -1.05
FN1-225ENST00000494446 KAZALD1Q96I82 304 aa8.51□□□□□ -1.05
FN1-225ENST00000494446 RABGAP1Q9Y3P9 1069 aa8.51□□□□□ -1.05
FN1-225ENST00000494446 GAKO14976 1311 aa8.51□□□□□ -1.05
FN1-225ENST00000494446 ZNF236Q9UL36 1845 aa8.5□□□□□ -1.05
FN1-225ENST00000494446 DCDC2CA8MYV0 355 aa8.5□□□□□ -1.05
FN1-225ENST00000494446 USP17L10C9JJH3 530 aa8.5□□□□□ -1.05
FN1-225ENST00000494446 ERC2O15083 957 aa8.5□□□□□ -1.05
FN1-225ENST00000494446 TLL1O43897 1013 aa8.5□□□□□ -1.05
FN1-225ENST00000494446 CNMDO75829 334 aa8.5□□□□□ -1.05
FN1-225ENST00000494446 HOXC6P09630 235 aa8.5□□□□□ -1.05
FN1-225ENST00000494446 ACRP10323 421 aa8.5□□□□□ -1.05
FN1-225ENST00000494446 NHLH1Q02575 133 aa8.5□□□□□ -1.05
FN1-225ENST00000494446 FAAP100Q0VG06 881 aa8.5□□□□□ -1.05
FN1-225ENST00000494446 PPIGQ13427 754 aaKnown RBP eCLIP8.5□□□□□ -1.05
FN1-225ENST00000494446 FAM47AQ5JRC9 791 aa8.5□□□□□ -1.05
FN1-225ENST00000494446 CCDC174Q6PII3 467 aa8.5□□□□□ -1.05
FN1-225ENST00000494446 SLC4A10Q6U841 1118 aa8.5□□□□□ -1.05
FN1-225ENST00000494446 C16orf59Q7L2K0 433 aa8.5□□□□□ -1.05
FN1-225ENST00000494446 SLF2Q8IX21 1173 aa8.5□□□□□ -1.05
FN1-225ENST00000494446 HERVK_113Q902F9 699 aa8.5□□□□□ -1.05
FN1-225ENST00000494446 LPIN2Q92539 896 aa8.5□□□□□ -1.05
FN1-225ENST00000494446 BICC1Q9H694 974 aaKnown RBP8.5□□□□□ -1.05
FN1-225ENST00000494446 GNL3LQ9NVN8 582 aaKnown RBP8.5□□□□□ -1.05
FN1-225ENST00000494446 PHF24Q9UPV7 400 aa8.5□□□□□ -1.05
FN1-225ENST00000494446 SALL1Q9NSC2 1324 aa8.5□□□□□ -1.05
FN1-225ENST00000494446 A0A0G2JMZ2 1700 aa8.49□□□□□ -1.05
FN1-225ENST00000494446 PI4K2BG5E9Z4 385 aa8.49□□□□□ -1.05
FN1-225ENST00000494446 APBB1O00213 710 aa8.49□□□□□ -1.05
FN1-225ENST00000494446 TIMP1P01033 207 aa8.49□□□□□ -1.05
FN1-225ENST00000494446 ASNSP08243 561 aa8.49□□□□□ -1.05
FN1-225ENST00000494446 PRR29P0C7W0 189 aa8.49□□□□□ -1.05
FN1-225ENST00000494446 JAG1P78504 1218 aa8.49□□□□□ -1.05
FN1-225ENST00000494446 GRB14Q14449 540 aa8.49□□□□□ -1.05
FN1-225ENST00000494446 MFSD5Q6N075 450 aa8.49□□□□□ -1.05
FN1-225ENST00000494446 ZNF365Q70YC5 407 aa8.49□□□□□ -1.05
FN1-225ENST00000494446 XPNPEP3Q9NQH7 507 aa8.49□□□□□ -1.05
FN1-225ENST00000494446 ABCF2Q9UG63 623 aa8.49□□□□□ -1.05
FN1-225ENST00000494446 DENND2AQ9ULE3 1009 aa8.49□□□□□ -1.05
FN1-225ENST00000494446 YBX2Q9Y2T7 364 aaKnown RBP8.49□□□□□ -1.05
FN1-225ENST00000494446 FOCADQ5VW36 1801 aa8.49□□□□□ -1.05
FN1-225ENST00000494446 MYH1P12882 1939 aa8.48□□□□□ -1.05
FN1-225ENST00000494446 A0A1W2PQ45 241 aaPredicted RBP8.48□□□□□ -1.05
FN1-225ENST00000494446 A0A1W2PQY0 241 aa8.48□□□□□ -1.05
FN1-225ENST00000494446 PRR33A8MZF0 331 aa8.48□□□□□ -1.05
FN1-225ENST00000494446 ZBTB22O15209 634 aa8.48□□□□□ -1.05
FN1-225ENST00000494446 ALDH1L1O75891 902 aa8.48□□□□□ -1.05
FN1-225ENST00000494446 PGK1P00558 417 aa8.48□□□□□ -1.05
FN1-225ENST00000494446 NBPF7P0C2Y1 421 aaPredicted RBP8.48□□□□□ -1.05
FN1-225ENST00000494446 CSF2RAP15509 400 aa8.48□□□□□ -1.05
FN1-225ENST00000494446 RHBDL3P58872 404 aa8.48□□□□□ -1.05
FN1-225ENST00000494446 ZYXQ15942 572 aaKnown RBP8.48□□□□□ -1.05
FN1-225ENST00000494446 SHROOM1Q2M3G4 852 aaPredicted RBP8.48□□□□□ -1.05
FN1-225ENST00000494446 RASIP1Q5U651 963 aa8.48□□□□□ -1.05
FN1-225ENST00000494446 OLFML2BQ68BL8 750 aa8.48□□□□□ -1.05
FN1-225ENST00000494446 USP17L2Q6R6M4 530 aa8.48□□□□□ -1.05
FN1-225ENST00000494446 RNF180Q86T96 592 aa8.48□□□□□ -1.05
FN1-225ENST00000494446 ZGPATQ8N5A5 531 aaKnown RBP8.48□□□□□ -1.05
FN1-225ENST00000494446 SRCIN1Q9C0H9 1055 aa8.48□□□□□ -1.05
FN1-225ENST00000494446 EMILIN3Q9NT22 766 aa8.48□□□□□ -1.05
FN1-225ENST00000494446 BTBD7Q9P203 1132 aa8.48□□□□□ -1.05
FN1-225ENST00000494446 HERC5Q9UII4 1024 aaKnown RBP8.48□□□□□ -1.05
FN1-225ENST00000494446 MROH7-TTC4A0A0A0MT08 1334 aa8.48□□□□□ -1.05
FN1-225ENST00000494446 ZNF318Q5VUA4 2279 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 USP17L15C9J2P7 530 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 USP17L13C9JLJ4 530 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 USP17L11C9JVI0 530 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 USP17L18D6R9N7 530 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 USP17L22D6RA61 530 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms