RNA–Protein interactions for RNA: ENST00000494164.5

NEPRO-220, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 4

Gene NEPRO, Length 741 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-220ENST00000494164 MAGEB6Q8N7X4 407 aa18.37■□□□□ 0.53
NEPRO-220ENST00000494164 SSH3Q8TE77 659 aa18.37■□□□□ 0.53
NEPRO-220ENST00000494164 GPR108Q9NPR9 543 aa18.37■□□□□ 0.53
NEPRO-220ENST00000494164 BMP8BP34820 402 aa18.36■□□□□ 0.53
NEPRO-220ENST00000494164 RGS2P41220 211 aa18.36■□□□□ 0.53
NEPRO-220ENST00000494164 ATP8B2P98198 1209 aa18.36■□□□□ 0.53
NEPRO-220ENST00000494164 LRRC26Q2I0M4 334 aa18.36■□□□□ 0.53
NEPRO-220ENST00000494164 MORN1Q5T089 497 aa18.36■□□□□ 0.53
NEPRO-220ENST00000494164 ZKSCAN2Q63HK3 967 aa18.36■□□□□ 0.53
NEPRO-220ENST00000494164 USP17L2Q6R6M4 530 aa18.36■□□□□ 0.53
NEPRO-220ENST00000494164 PLEKHH3Q7Z736 793 aa18.36■□□□□ 0.53
NEPRO-220ENST00000494164 DEFB123Q8N688 67 aa18.36■□□□□ 0.53
NEPRO-220ENST00000494164 APBA2Q99767 749 aa18.36■□□□□ 0.53
NEPRO-220ENST00000494164 UBE2OQ9C0C9 1292 aaKnown RBP18.36■□□□□ 0.53
NEPRO-220ENST00000494164 ANTXR1Q9H6X2 564 aa18.36■□□□□ 0.53
NEPRO-220ENST00000494164 MYO9BQ13459 2157 aa18.35■□□□□ 0.53
NEPRO-220ENST00000494164 CNMDO75829 334 aa18.35■□□□□ 0.53
NEPRO-220ENST00000494164 XRCC5P13010 732 aaKnown RBP18.35■□□□□ 0.53
NEPRO-220ENST00000494164 MDM2Q00987 491 aaPredicted RBP18.35■□□□□ 0.53
NEPRO-220ENST00000494164 ITPRIPQ8IWB1 547 aa18.35■□□□□ 0.53
NEPRO-220ENST00000494164 TDHQ8IZJ6 230 aa18.35■□□□□ 0.53
NEPRO-220ENST00000494164 USP6NLQ92738 828 aa18.35■□□□□ 0.53
NEPRO-220ENST00000494164 EAF2Q96CJ1 260 aaPredicted RBP18.35■□□□□ 0.53
NEPRO-220ENST00000494164 FLRT1Q9NZU1 646 aa18.35■□□□□ 0.53
NEPRO-220ENST00000494164 CDH23Q9H251 3354 aa18.34■□□□□ 0.53
NEPRO-220ENST00000494164 EVX2Q03828 476 aa18.34■□□□□ 0.53
NEPRO-220ENST00000494164 LHX8Q68G74 356 aa18.34■□□□□ 0.53
NEPRO-220ENST00000494164 ACER1Q8TDN7 264 aa18.34■□□□□ 0.53
NEPRO-220ENST00000494164 PRUNE2Q8WUY3 3088 aa18.34■□□□□ 0.53
NEPRO-220ENST00000494164 FTSJ3Q8IY81 847 aaKnown RBP18.33■□□□□ 0.52
NEPRO-220ENST00000494164 BCL11AQ9H165 835 aa18.33■□□□□ 0.52
NEPRO-220ENST00000494164 SERPINB13Q9UIV8 391 aa18.33■□□□□ 0.52
NEPRO-220ENST00000494164 COL6A1P12109 1028 aa18.32■□□□□ 0.52
NEPRO-220ENST00000494164 RLBP1P12271 317 aa18.32■□□□□ 0.52
NEPRO-220ENST00000494164 VCAM1P19320 739 aa18.32■□□□□ 0.52
NEPRO-220ENST00000494164 CNGA1P29973 690 aa18.32■□□□□ 0.52
NEPRO-220ENST00000494164 MAP2K5Q13163 448 aa18.32■□□□□ 0.52
NEPRO-220ENST00000494164 ABCB5Q2M3G0 1257 aa18.32■□□□□ 0.52
NEPRO-220ENST00000494164 CERKLQ49MI3 558 aaPredicted RBP18.32■□□□□ 0.52
NEPRO-220ENST00000494164 TRMT44Q8IYL2 757 aaKnown RBP18.32■□□□□ 0.52
NEPRO-220ENST00000494164 ZNF512BQ96KM6 892 aaPredicted RBP18.32■□□□□ 0.52
NEPRO-220ENST00000494164 GINM1Q9NU53 330 aa18.32■□□□□ 0.52
NEPRO-220ENST00000494164 BTBD7Q9P203 1132 aa18.32■□□□□ 0.52
NEPRO-220ENST00000494164 GBF1Q92538 1859 aa18.31■□□□□ 0.52
NEPRO-220ENST00000494164 USP17L15C9J2P7 530 aa18.31■□□□□ 0.52
NEPRO-220ENST00000494164 USP17L13C9JLJ4 530 aa18.31■□□□□ 0.52
NEPRO-220ENST00000494164 USP17L11C9JVI0 530 aa18.31■□□□□ 0.52
NEPRO-220ENST00000494164 USP17L18D6R9N7 530 aa18.31■□□□□ 0.52
NEPRO-220ENST00000494164 USP17L22D6RA61 530 aa18.31■□□□□ 0.52
NEPRO-220ENST00000494164 USP17L17D6RBQ6 530 aa18.31■□□□□ 0.52
NEPRO-220ENST00000494164 USP17L19D6RCP7 530 aa18.31■□□□□ 0.52
NEPRO-220ENST00000494164 USP17L20D6RJB6 530 aa18.31■□□□□ 0.52
NEPRO-220ENST00000494164 CCER2I3L3R5 266 aa18.31■□□□□ 0.52
NEPRO-220ENST00000494164 PLCD1P51178 756 aa18.31■□□□□ 0.52
NEPRO-220ENST00000494164 USP17L24Q0WX57 530 aa18.31■□□□□ 0.52
NEPRO-220ENST00000494164 TATDN1Q6P1N9 297 aa18.31■□□□□ 0.52
NEPRO-220ENST00000494164 GTF3C2Q8WUA4 911 aaPredicted RBP18.31■□□□□ 0.52
NEPRO-220ENST00000494164 EDC3Q96F86 508 aaKnown RBP18.31■□□□□ 0.52
NEPRO-220ENST00000494164 SENP6Q9GZR1 1112 aaPredicted RBP18.31■□□□□ 0.52
NEPRO-220ENST00000494164 EXOC6BQ9Y2D4 811 aa18.31■□□□□ 0.52
NEPRO-220ENST00000494164 RABGAP1Q9Y3P9 1069 aa18.31■□□□□ 0.52
NEPRO-220ENST00000494164 SHMT1P34896 483 aa18.3■□□□□ 0.52
NEPRO-220ENST00000494164 ATN1P54259 1190 aaPredicted RBP18.3■□□□□ 0.52
NEPRO-220ENST00000494164 LRIT3Q3SXY7 679 aa18.3■□□□□ 0.52
NEPRO-220ENST00000494164 CATSPERGQ6ZRH7 1159 aa18.3■□□□□ 0.52
NEPRO-220ENST00000494164 AACSQ86V21 672 aa18.3■□□□□ 0.52
NEPRO-220ENST00000494164 NPLOC4Q8TAT6 608 aa18.3■□□□□ 0.52
NEPRO-220ENST00000494164 C12orf42Q96LP6 360 aa18.3■□□□□ 0.52
NEPRO-220ENST00000494164 RPAP3Q9H6T3 665 aaPredicted RBP18.3■□□□□ 0.52
NEPRO-220ENST00000494164 SPDYE16A6NNV3 312 aaPredicted RBP18.29■□□□□ 0.52
NEPRO-220ENST00000494164 CYP2C19P33261 490 aa18.29■□□□□ 0.52
NEPRO-220ENST00000494164 CCNA1P78396 465 aa18.29■□□□□ 0.52
NEPRO-220ENST00000494164 SEPT2Q15019 361 aa18.29■□□□□ 0.52
NEPRO-220ENST00000494164 ANO1Q5XXA6 986 aa18.29■□□□□ 0.52
NEPRO-220ENST00000494164 EHD4Q9H223 541 aa18.29■□□□□ 0.52
NEPRO-220ENST00000494164 NOP58Q9Y2X3 529 aaKnown RBP18.29■□□□□ 0.52
NEPRO-220ENST00000494164 IVNS1ABPQ9Y6Y0 642 aa18.29■□□□□ 0.52
NEPRO-220ENST00000494164 VCANP13611 3396 aa18.29■□□□□ 0.52
NEPRO-220ENST00000494164 GREB1LQ9C091 1923 aaPredicted RBP18.29■□□□□ 0.52
NEPRO-220ENST00000494164 MPHOSPH10O00566 681 aaKnown RBP18.28■□□□□ 0.52
NEPRO-220ENST00000494164 POLR3DP05423 398 aaPredicted RBP18.28■□□□□ 0.52
NEPRO-220ENST00000494164 PTPREP23469 700 aa18.28■□□□□ 0.52
NEPRO-220ENST00000494164 GUCY1A2P33402 732 aa18.28■□□□□ 0.52
NEPRO-220ENST00000494164 USP14P54578 494 aa18.28■□□□□ 0.52
NEPRO-220ENST00000494164 ATP2B2Q01814 1243 aa18.28■□□□□ 0.52
NEPRO-220ENST00000494164 MAP3K12Q12852 859 aa18.28■□□□□ 0.52
NEPRO-220ENST00000494164 MFSD14CQ5VZR4 134 aa18.28■□□□□ 0.52
NEPRO-220ENST00000494164 IL1RAPL2Q9NP60 686 aa18.28■□□□□ 0.52
NEPRO-220ENST00000494164 CABP5Q9NP86 173 aa18.28■□□□□ 0.52
NEPRO-220ENST00000494164 MTMR10Q9NXD2 777 aa18.28■□□□□ 0.52
NEPRO-220ENST00000494164 APBB1O00213 710 aa18.27■□□□□ 0.52
NEPRO-220ENST00000494164 GLRX3O76003 335 aaKnown RBP18.27■□□□□ 0.52
NEPRO-220ENST00000494164 MYCNP04198 464 aaPredicted RBP18.27■□□□□ 0.52
NEPRO-220ENST00000494164 SAMD1Q6SPF0 538 aaPredicted RBP18.27■□□□□ 0.52
NEPRO-220ENST00000494164 TTC6Q86TZ1 520 aa18.27■□□□□ 0.52
NEPRO-220ENST00000494164 CLEC10AQ8IUN9 316 aa18.27■□□□□ 0.52
NEPRO-220ENST00000494164 TRPV1Q8NER1 839 aa18.27■□□□□ 0.52
NEPRO-220ENST00000494164 FAM161BQ96MY7 647 aa18.27■□□□□ 0.52
NEPRO-220ENST00000494164 RIOK1Q9BRS2 568 aaKnown RBP18.27■□□□□ 0.52
NEPRO-220ENST00000494164 KIAA1683Q9H0B3 1180 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms