RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 JARID2Q92833 1246 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-213ENST00000494016 RILPL2Q969X0 211 aa7.3□□□□□ -1.24
CPSF7-213ENST00000494016 IL17RAQ96F46 866 aa7.3□□□□□ -1.24
CPSF7-213ENST00000494016 GZF1Q9H116 711 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-213ENST00000494016 KCPQ6ZWJ8 1503 aa7.3□□□□□ -1.24
CPSF7-213ENST00000494016 PAPPAQ13219 1627 aa7.3□□□□□ -1.24
CPSF7-213ENST00000494016 SBF2Q86WG5 1849 aa7.29□□□□□ -1.24
CPSF7-213ENST00000494016 LAMB4A4D0S4 1761 aa7.29□□□□□ -1.24
CPSF7-213ENST00000494016 ARFGEF2Q9Y6D5 1785 aa7.29□□□□□ -1.24
CPSF7-213ENST00000494016 K7ELQ4 463 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-213ENST00000494016 REC8O95072 547 aa7.29□□□□□ -1.24
CPSF7-213ENST00000494016 MAP4K4O95819 1239 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-213ENST00000494016 A1BGP04217 495 aa7.29□□□□□ -1.24
CPSF7-213ENST00000494016 BMP4P12644 408 aa7.29□□□□□ -1.24
CPSF7-213ENST00000494016 RFX5P48382 616 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-213ENST00000494016 NEXNQ0ZGT2 675 aa7.29□□□□□ -1.24
CPSF7-213ENST00000494016 TTLL7Q6ZT98 887 aa7.29□□□□□ -1.24
CPSF7-213ENST00000494016 ETFBKMTQ8IXQ9 262 aa7.29□□□□□ -1.24
CPSF7-213ENST00000494016 HELQQ8TDG4 1101 aa7.29□□□□□ -1.24
CPSF7-213ENST00000494016 GTF3C2Q8WUA4 911 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-213ENST00000494016 IL25Q9H293 177 aa7.29□□□□□ -1.24
CPSF7-213ENST00000494016 STIM2Q9P246 746 aa7.29□□□□□ -1.24
CPSF7-213ENST00000494016 KCNH4Q9UQ05 1017 aa7.29□□□□□ -1.24
CPSF7-213ENST00000494016 AFDNP55196 1824 aaKnown RBP7.29□□□□□ -1.24
CPSF7-213ENST00000494016 AK9Q5TCS8 1911 aa7.29□□□□□ -1.24
CPSF7-213ENST00000494016 TTC41PQ6P2S7 1318 aa7.28□□□□□ -1.24
CPSF7-213ENST00000494016 TOGARAM1Q9Y4F4 1720 aa7.28□□□□□ -1.24
CPSF7-213ENST00000494016 OPLAHO14841 1288 aa7.28□□□□□ -1.24
CPSF7-213ENST00000494016 ARID4AP29374 1257 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-213ENST00000494016 MCM4P33991 863 aa7.28□□□□□ -1.24
CPSF7-213ENST00000494016 ARSDP51689 593 aa7.28□□□□□ -1.24
CPSF7-213ENST00000494016 FOXO4P98177 505 aa7.28□□□□□ -1.24
CPSF7-213ENST00000494016 G3BP1Q13283 466 aaKnown RBP eCLIP7.28□□□□□ -1.24
CPSF7-213ENST00000494016 GRIN2CQ14957 1233 aa7.28□□□□□ -1.24
CPSF7-213ENST00000494016 RABL6Q3YEC7 729 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-213ENST00000494016 FAM26DQ5JW98 314 aa7.28□□□□□ -1.24
CPSF7-213ENST00000494016 TREML1Q86YW5 311 aa7.28□□□□□ -1.24
CPSF7-213ENST00000494016 ERC1Q8IUD2 1116 aa7.28□□□□□ -1.24
CPSF7-213ENST00000494016 EAF2Q96CJ1 260 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-213ENST00000494016 KRTAP4-8Q9BYQ9 185 aa7.28□□□□□ -1.24
CPSF7-213ENST00000494016 COPRSQ9NQ92 184 aa7.28□□□□□ -1.24
CPSF7-213ENST00000494016 DNMT3AQ9Y6K1 912 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-213ENST00000494016 COL15A1P39059 1388 aa7.28□□□□□ -1.24
CPSF7-213ENST00000494016 DISP2A7MBM2 1401 aa7.27□□□□□ -1.24
CPSF7-213ENST00000494016 TNS2Q63HR2 1409 aa7.27□□□□□ -1.24
CPSF7-213ENST00000494016 EPB41L2O43491 1005 aaKnown RBP7.27□□□□□ -1.25
CPSF7-213ENST00000494016 BRD1O95696 1058 aa7.27□□□□□ -1.25
CPSF7-213ENST00000494016 GRNP28799 593 aaKnown RBP7.27□□□□□ -1.25
CPSF7-213ENST00000494016 OS9Q13438 667 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-213ENST00000494016 CLASRPQ8N2M8 674 aaKnown RBP7.27□□□□□ -1.25
CPSF7-213ENST00000494016 KLHDC4Q8TBB5 520 aa7.27□□□□□ -1.25
CPSF7-213ENST00000494016 PIGBQ92521 554 aa7.27□□□□□ -1.25
CPSF7-213ENST00000494016 ACDQ96AP0 544 aa7.27□□□□□ -1.25
CPSF7-213ENST00000494016 ATG3Q9NT62 314 aa7.27□□□□□ -1.25
CPSF7-213ENST00000494016 ECHDC1Q9NTX5 307 aa7.27□□□□□ -1.25
CPSF7-213ENST00000494016 PALD1Q9ULE6 856 aa7.27□□□□□ -1.25
CPSF7-213ENST00000494016 RGPD3A6NKT7 1758 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-213ENST00000494016 RGPD4Q7Z3J3 1758 aa7.27□□□□□ -1.25
CPSF7-213ENST00000494016 ITGB4P16144 1822 aa7.27□□□□□ -1.25
CPSF7-213ENST00000494016 A0A087WZG4 1122 aa7.26□□□□□ -1.25
CPSF7-213ENST00000494016 SGSM2O43147 1006 aa7.26□□□□□ -1.25
CPSF7-213ENST00000494016 GLRX3O76003 335 aaKnown RBP7.26□□□□□ -1.25
CPSF7-213ENST00000494016 IFIT2P09913 472 aaKnown RBP7.26□□□□□ -1.25
CPSF7-213ENST00000494016 ARAFP10398 606 aa7.26□□□□□ -1.25
CPSF7-213ENST00000494016 EPB42P16452 691 aa7.26□□□□□ -1.25
CPSF7-213ENST00000494016 IRS1P35568 1242 aa7.26□□□□□ -1.25
CPSF7-213ENST00000494016 PTPN12Q05209 780 aaKnown RBP7.26□□□□□ -1.25
CPSF7-213ENST00000494016 RAB3GAP1Q15042 981 aa7.26□□□□□ -1.25
CPSF7-213ENST00000494016 AACSQ86V21 672 aa7.26□□□□□ -1.25
CPSF7-213ENST00000494016 DHX37Q8IY37 1157 aaKnown RBP7.26□□□□□ -1.25
CPSF7-213ENST00000494016 WHAMMQ8TF30 809 aa7.26□□□□□ -1.25
CPSF7-213ENST00000494016 SLC30A3Q99726 388 aa7.26□□□□□ -1.25
CPSF7-213ENST00000494016 ISCA1Q9BUE6 129 aa7.26□□□□□ -1.25
CPSF7-213ENST00000494016 OXCT2Q9BYC2 517 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-213ENST00000494016 LSG1Q9H089 658 aaKnown RBP7.26□□□□□ -1.25
CPSF7-213ENST00000494016 CCDC8Q9H0W5 538 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-213ENST00000494016 C11orf16Q9NQ32 467 aa7.26□□□□□ -1.25
CPSF7-213ENST00000494016 AVENQ9NQS1 362 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-213ENST00000494016 ASAP1Q9ULH1 1129 aa7.26□□□□□ -1.25
CPSF7-213ENST00000494016 ZBTB39O15060 712 aa7.25□□□□□ -1.25
CPSF7-213ENST00000494016 NPR3P17342 541 aa7.25□□□□□ -1.25
CPSF7-213ENST00000494016 HSPA4P34932 840 aa7.25□□□□□ -1.25
CPSF7-213ENST00000494016 ANAPC15P60006 121 aa7.25□□□□□ -1.25
CPSF7-213ENST00000494016 SPEM2Q0P670 501 aa7.25□□□□□ -1.25
CPSF7-213ENST00000494016 ZNF468Q5VIY5 522 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-213ENST00000494016 ZNF385CQ66K41 422 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-213ENST00000494016 LYPD4Q6UWN0 246 aa7.25□□□□□ -1.25
CPSF7-213ENST00000494016 UBE3BQ7Z3V4 1068 aa7.25□□□□□ -1.25
CPSF7-213ENST00000494016 DNAJC10Q8IXB1 793 aa7.25□□□□□ -1.25
CPSF7-213ENST00000494016 CNTROBQ8N137 903 aa7.25□□□□□ -1.25
CPSF7-213ENST00000494016 TNPO1Q92973 898 aaKnown RBP7.25□□□□□ -1.25
CPSF7-213ENST00000494016 SIL1Q9H173 461 aa7.25□□□□□ -1.25
CPSF7-213ENST00000494016 TLR7Q9NYK1 1049 aaKnown RBP7.25□□□□□ -1.25
CPSF7-213ENST00000494016 TMOD3Q9NYL9 352 aa7.25□□□□□ -1.25
CPSF7-213ENST00000494016 EGFL7Q9UHF1 273 aa7.25□□□□□ -1.25
CPSF7-213ENST00000494016 GDF2Q9UK05 429 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-213ENST00000494016 PRR12Q9ULL5 1215 aa7.25□□□□□ -1.25
CPSF7-213ENST00000494016 NHSQ6T4R5 1651 aa7.25□□□□□ -1.25
CPSF7-213ENST00000494016 TJP1Q07157 1748 aa7.24□□□□□ -1.25
CPSF7-213ENST00000494016 EXOC5O00471 708 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms