RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.21■□□□□ 0.038e-13■■■■■ 31.1
HSPG2-212ENST00000493940 ATP8A2Q9NTI2 1148 aa15.21■□□□□ 0.03
HSPG2-212ENST00000493940 GINM1Q9NU53 330 aa15.21■□□□□ 0.03
HSPG2-212ENST00000493940 RBPJLQ9UBG7 517 aa15.21■□□□□ 0.03
HSPG2-212ENST00000493940 SLC4A4Q9Y6R1 1079 aa15.21■□□□□ 0.03
HSPG2-212ENST00000493940 RNF113AO15541 343 aaKnown RBP15.2■□□□□ 0.02
HSPG2-212ENST00000493940 FLT3LGP49771 235 aa15.2■□□□□ 0.02
HSPG2-212ENST00000493940 FCGRTP55899 365 aa15.2■□□□□ 0.02
HSPG2-212ENST00000493940 HDAC1Q13547 482 aaPredicted RBP15.2■□□□□ 0.02
HSPG2-212ENST00000493940 ARHGEF6Q15052 776 aa15.2■□□□□ 0.02
HSPG2-212ENST00000493940 EPB41L4AQ9HCS5 686 aaPredicted RBP15.2■□□□□ 0.02
HSPG2-212ENST00000493940 GJD2Q9UKL4 321 aa15.2■□□□□ 0.02
HSPG2-212ENST00000493940 CNMDO75829 334 aa15.19■□□□□ 0.02
HSPG2-212ENST00000493940 ELNP15502 786 aa15.19■□□□□ 0.02
HSPG2-212ENST00000493940 CDK8P49336 464 aa15.19■□□□□ 0.02
HSPG2-212ENST00000493940 HERVK_113P62684 666 aa15.19■□□□□ 0.02
HSPG2-212ENST00000493940 FAM110CQ1W6H9 321 aa15.19■□□□□ 0.02
HSPG2-212ENST00000493940 USP17L2Q6R6M4 530 aa15.19■□□□□ 0.02
HSPG2-212ENST00000493940 TMOD4Q9NZQ9 345 aa15.19■□□□□ 0.02
HSPG2-212ENST00000493940 MORF4L1Q9UBU8 362 aa15.19■□□□□ 0.02
HSPG2-212ENST00000493940 SUPT16HQ9Y5B9 1047 aaKnown RBP15.19■□□□□ 0.02
HSPG2-212ENST00000493940 TTC41PQ6P2S7 1318 aa15.18■□□□□ 0.02
HSPG2-212ENST00000493940 ALPK3Q96L96 1907 aa15.18■□□□□ 0.02
HSPG2-212ENST00000493940 MX1P20591 662 aa15.18■□□□□ 0.02
HSPG2-212ENST00000493940 GRK4P32298 578 aa15.18■□□□□ 0.02
HSPG2-212ENST00000493940 PRMT2P55345 433 aa15.18■□□□□ 0.02
HSPG2-212ENST00000493940 STK11IPQ8N1F8 1099 aa15.18■□□□□ 0.02
HSPG2-212ENST00000493940 RAET1EQ8TD07 263 aa15.18■□□□□ 0.02
HSPG2-212ENST00000493940 APPBP2Q92624 585 aa15.18■□□□□ 0.02
HSPG2-212ENST00000493940 C12orf42Q96LP6 360 aa15.18■□□□□ 0.02
HSPG2-212ENST00000493940 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.18■□□□□ 0.02
HSPG2-212ENST00000493940 KIAA1683Q9H0B3 1180 aa15.18■□□□□ 0.02
HSPG2-212ENST00000493940 PNMA3Q9UL41 463 aa15.18■□□□□ 0.02
HSPG2-212ENST00000493940 CEP290O15078 2479 aa15.18■□□□□ 0.02
HSPG2-212ENST00000493940 MPHOSPH10O00566 681 aaKnown RBP15.17■□□□□ 0.02
HSPG2-212ENST00000493940 TNPO2O14787 897 aaKnown RBP15.17■□□□□ 0.02
HSPG2-212ENST00000493940 FOXP2O15409 715 aa15.17■□□□□ 0.02
HSPG2-212ENST00000493940 GPAA1O43292 621 aa15.17■□□□□ 0.02
HSPG2-212ENST00000493940 HOXD10P28358 340 aa15.17■□□□□ 0.02
HSPG2-212ENST00000493940 GCLCP48506 637 aaPredicted RBP15.17■□□□□ 0.02
HSPG2-212ENST00000493940 ZSCAN25Q6NSZ9 544 aa15.17■□□□□ 0.02
HSPG2-212ENST00000493940 CATSPERGQ6ZRH7 1159 aa15.17■□□□□ 0.02
HSPG2-212ENST00000493940 C16orf86Q6ZW13 317 aa15.17■□□□□ 0.02
HSPG2-212ENST00000493940 NBPF11Q86T75 865 aa15.17■□□□□ 0.02
HSPG2-212ENST00000493940 SHISA4Q96DD7 197 aa15.17■□□□□ 0.02
HSPG2-212ENST00000493940 PORCNQ9H237 461 aa15.17■□□□□ 0.02
HSPG2-212ENST00000493940 CABP5Q9NP86 173 aa15.17■□□□□ 0.02
HSPG2-212ENST00000493940 A0A0G2JMZ2 1700 aa15.17■□□□□ 0.02
HSPG2-212ENST00000493940 SMCHD1A6NHR9 2005 aa15.16■□□□□ 0.02
HSPG2-212ENST00000493940 ADCY3O60266 1144 aa15.16■□□□□ 0.02
HSPG2-212ENST00000493940 VCAM1P19320 739 aa15.16■□□□□ 0.02
HSPG2-212ENST00000493940 PDE1AP54750 535 aa15.16■□□□□ 0.02
HSPG2-212ENST00000493940 IRX3P78415 501 aaPredicted RBP15.16■□□□□ 0.02
HSPG2-212ENST00000493940 TRIM32Q13049 653 aa15.16■□□□□ 0.02
HSPG2-212ENST00000493940 PABPC4Q13310 644 aaKnown RBP eCLIP15.16■□□□□ 0.02
HSPG2-212ENST00000493940 CCDC129Q6ZRS4 1044 aa15.16■□□□□ 0.02
HSPG2-212ENST00000493940 GPATCH3Q96I76 525 aa15.16■□□□□ 0.02
HSPG2-212ENST00000493940 TMEM106CQ9BVX2 250 aa15.16■□□□□ 0.02
HSPG2-212ENST00000493940 BTBD7Q9P203 1132 aa15.16■□□□□ 0.02
HSPG2-212ENST00000493940 STAP2Q9UGK3 403 aa15.16■□□□□ 0.02
HSPG2-212ENST00000493940 TACC3Q9Y6A5 838 aa15.16■□□□□ 0.02
HSPG2-212ENST00000493940 GLRX3O76003 335 aaKnown RBP15.15■□□□□ 0.02
HSPG2-212ENST00000493940 CCL5P13501 91 aa15.15■□□□□ 0.02
HSPG2-212ENST00000493940 SBK1Q52WX2 424 aa15.15■□□□□ 0.02
HSPG2-212ENST00000493940 ZMYM1Q5SVZ6 1142 aa15.15■□□□□ 0.02
HSPG2-212ENST00000493940 B4GALNT3Q6L9W6 998 aa15.15■□□□□ 0.02
HSPG2-212ENST00000493940 SMC5Q8IY18 1101 aa15.15■□□□□ 0.02
HSPG2-212ENST00000493940 FEZ1Q99689 392 aa15.15■□□□□ 0.02
HSPG2-212ENST00000493940 PAGR1Q9BTK6 254 aa15.15■□□□□ 0.02
HSPG2-212ENST00000493940 LNPKQ9C0E8 428 aa15.15■□□□□ 0.02
HSPG2-212ENST00000493940 UNC93B1Q9H1C4 597 aa15.15■□□□□ 0.02
HSPG2-212ENST00000493940 RPAP3Q9H6T3 665 aaPredicted RBP15.15■□□□□ 0.02
HSPG2-212ENST00000493940 SWAP70Q9UH65 585 aa15.15■□□□□ 0.02
HSPG2-212ENST00000493940 USP17L15C9J2P7 530 aa15.14■□□□□ 0.01
HSPG2-212ENST00000493940 USP17L13C9JLJ4 530 aa15.14■□□□□ 0.01
HSPG2-212ENST00000493940 USP17L11C9JVI0 530 aa15.14■□□□□ 0.01
HSPG2-212ENST00000493940 USP17L18D6R9N7 530 aa15.14■□□□□ 0.01
HSPG2-212ENST00000493940 USP17L22D6RA61 530 aa15.14■□□□□ 0.01
HSPG2-212ENST00000493940 USP17L17D6RBQ6 530 aa15.14■□□□□ 0.01
HSPG2-212ENST00000493940 USP17L19D6RCP7 530 aa15.14■□□□□ 0.01
HSPG2-212ENST00000493940 USP17L20D6RJB6 530 aa15.14■□□□□ 0.01
HSPG2-212ENST00000493940 RASA1P20936 1047 aa15.14■□□□□ 0.01
HSPG2-212ENST00000493940 ERVK-9P63128 1117 aa15.14■□□□□ 0.01
HSPG2-212ENST00000493940 ERVK-24P63145 666 aa15.14■□□□□ 0.01
HSPG2-212ENST00000493940 IRX6P78412 446 aaPredicted RBP15.14■□□□□ 0.01
HSPG2-212ENST00000493940 USP17L24Q0WX57 530 aa15.14■□□□□ 0.01
HSPG2-212ENST00000493940 IRF5Q13568 498 aa15.14■□□□□ 0.01
HSPG2-212ENST00000493940 TMEM179Q6ZVK1 233 aa15.14■□□□□ 0.01
HSPG2-212ENST00000493940 FRMPD3Q5JV73 1810 aa15.13■□□□□ 0.01
HSPG2-212ENST00000493940 SPDYE16A6NNV3 312 aaPredicted RBP15.13■□□□□ 0.01
HSPG2-212ENST00000493940 MINDY4BA8MYZ0 360 aa15.13■□□□□ 0.01
HSPG2-212ENST00000493940 PATL2C9JE40 543 aaKnown RBP15.13■□□□□ 0.01
HSPG2-212ENST00000493940 ERC2O15083 957 aa15.13■□□□□ 0.01
HSPG2-212ENST00000493940 INHAP05111 366 aa15.13■□□□□ 0.01
HSPG2-212ENST00000493940 ZFYP08048 801 aaPredicted RBP15.13■□□□□ 0.01
HSPG2-212ENST00000493940 IFNL3Q8IZI9 196 aa15.13■□□□□ 0.01
HSPG2-212ENST00000493940 GPRC5AQ8NFJ5 357 aa15.13■□□□□ 0.01
HSPG2-212ENST00000493940 USP6NLQ92738 828 aa15.13■□□□□ 0.01
HSPG2-212ENST00000493940 FSD1Q9BTV5 496 aa15.13■□□□□ 0.01
HSPG2-212ENST00000493940 INCENPQ9NQS7 918 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms