RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 ZNF579Q8NAF0 562 aaKnown RBP12.43□□□□□ -0.42
PHACTR4-204ENST00000493669 TGFBRAP1Q8WUH2 860 aa12.43□□□□□ -0.42
PHACTR4-204ENST00000493669 PARP3Q9Y6F1 533 aa12.43□□□□□ -0.42
PHACTR4-204ENST00000493669 MARCKSP29966 332 aaPredicted RBP12.42□□□□□ -0.42
PHACTR4-204ENST00000493669 SYKP43405 635 aa12.42□□□□□ -0.42
PHACTR4-204ENST00000493669 TEX11Q8IYF3 940 aa12.42□□□□□ -0.42
PHACTR4-204ENST00000493669 CMTR1Q8N1G2 835 aaKnown RBP12.42□□□□□ -0.42
PHACTR4-204ENST00000493669 MASTLQ96GX5 879 aa12.42□□□□□ -0.42
PHACTR4-204ENST00000493669 TMX4Q9H1E5 349 aaPredicted RBP12.42□□□□□ -0.42
PHACTR4-204ENST00000493669 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.42□□□□□ -0.42
PHACTR4-204ENST00000493669 V9GY48 417 aaPredicted RBP12.42□□□□□ -0.42
PHACTR4-204ENST00000493669 FOCADQ5VW36 1801 aa12.42□□□□□ -0.42
PHACTR4-204ENST00000493669 TOB1P50616 345 aaPredicted RBP12.42□□□□□ -0.42
PHACTR4-204ENST00000493669 EVX2Q03828 476 aa12.42□□□□□ -0.42
PHACTR4-204ENST00000493669 IQCB1Q15051 598 aa12.42□□□□□ -0.42
PHACTR4-204ENST00000493669 SHC4Q6S5L8 630 aa12.42□□□□□ -0.42
PHACTR4-204ENST00000493669 SARM1Q6SZW1 724 aa12.42□□□□□ -0.42
PHACTR4-204ENST00000493669 C16orf86Q6ZW13 317 aa12.42□□□□□ -0.42
PHACTR4-204ENST00000493669 ZNF444Q8N0Y2 327 aaPredicted RBP12.42□□□□□ -0.42
PHACTR4-204ENST00000493669 MPNDQ8N594 471 aa12.42□□□□□ -0.42
PHACTR4-204ENST00000493669 BPIFA3Q9BQP9 254 aa12.42□□□□□ -0.42
PHACTR4-204ENST00000493669 TNS1Q9HBL0 1735 aaKnown RBP12.42□□□□□ -0.42
PHACTR4-204ENST00000493669 GOLGA6L19H0YKK7 550 aa12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 NMT2O60551 498 aa12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 PTPREP23469 700 aa12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 RHBDL3P58872 404 aa12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 ZRSR1Q15695 479 aaKnown RBP12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 AP5Z1O43299 807 aa12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 TSPY3P0CV98 308 aa12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 TSPY8P0CW00 308 aa12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 SRBD1Q8N5C6 995 aaKnown RBP12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 ZC3H12CQ9C0D7 883 aaKnown RBP12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 COL11A2P13942 1736 aaPredicted RBP12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 FLT1P17948 1338 aa12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 MMP10P09238 476 aa12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 SCG2P13521 617 aa12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 GRM4Q14833 912 aa12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 PFKFB3Q16875 520 aaPredicted RBP12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 MAPKAPK5Q8IW41 473 aa12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 PNMA1Q8ND90 353 aa12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 EYA3Q99504 573 aa12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 SH3GLB2Q9NR46 395 aa12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 IL17RBQ9NRM6 502 aa12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 VPS54Q9P1Q0 977 aa12.41□□□□□ -0.42
PHACTR4-204ENST00000493669 RASA1P20936 1047 aa12.4□□□□□ -0.42
PHACTR4-204ENST00000493669 CDC25BP30305 580 aa12.4□□□□□ -0.42
PHACTR4-204ENST00000493669 PLCB2Q00722 1185 aa12.4□□□□□ -0.42
PHACTR4-204ENST00000493669 NR5A1Q13285 461 aa12.4□□□□□ -0.42
PHACTR4-204ENST00000493669 C11orf57Q6ZUT1 292 aaPredicted RBP12.4□□□□□ -0.42
PHACTR4-204ENST00000493669 DYNLL2Q96FJ2 89 aa12.4□□□□□ -0.42
PHACTR4-204ENST00000493669 LZTS2Q9BRK4 669 aa12.4□□□□□ -0.42
PHACTR4-204ENST00000493669 FAM13BQ9NYF5 915 aa12.4□□□□□ -0.42
PHACTR4-204ENST00000493669 FBXO2Q9UK22 296 aaPredicted RBP12.4□□□□□ -0.42
PHACTR4-204ENST00000493669 TRIM75PA6NK02 468 aa12.4□□□□□ -0.42
PHACTR4-204ENST00000493669 RXRBP28702 533 aa12.4□□□□□ -0.42
PHACTR4-204ENST00000493669 DPP8Q6V1X1 898 aaPredicted RBP12.4□□□□□ -0.42
PHACTR4-204ENST00000493669 PLA2G4DQ86XP0 818 aa12.4□□□□□ -0.42
PHACTR4-204ENST00000493669 SRPRBQ9Y5M8 271 aaKnown RBP12.4□□□□□ -0.42
PHACTR4-204ENST00000493669 CALML3P27482 149 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 TRAPPC10P48553 1259 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 GTF2IP78347 998 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 NEDD1Q8NHV4 660 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 OXER1Q8TDS5 423 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 TNFRSF25Q93038 417 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 SHISA4Q96DD7 197 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 HOOK1Q9UJC3 728 aaKnown RBP12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 TUBE1Q9UJT0 475 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 DAGLAQ9Y4D2 1042 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.39□□□□□ -0.435e-7■■■□□ 15.9
PHACTR4-204ENST00000493669 SNED1Q8TER0 1413 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 BECN2A8MW95 431 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 PLCD1P51178 756 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 NLRP12P59046 1061 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 CABP5Q9NP86 173 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 KCNH3Q9ULD8 1083 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 PLIN4Q96Q06 1357 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 MYH1P12882 1939 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 CDK8P49336 464 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 ZNF75DP51815 510 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 STYK1Q6J9G0 422 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 TAOK2Q9UL54 1235 aa12.39□□□□□ -0.43
PHACTR4-204ENST00000493669 NOVP48745 357 aa12.38□□□□□ -0.43
PHACTR4-204ENST00000493669 KIAA2012Q0VF49 1180 aa12.38□□□□□ -0.43
PHACTR4-204ENST00000493669 NPY5RQ15761 445 aa12.38□□□□□ -0.43
PHACTR4-204ENST00000493669 SAP30BPQ9UHR5 308 aaKnown RBP12.38□□□□□ -0.43
PHACTR4-204ENST00000493669 PCDHB6Q9Y5E3 794 aa12.38□□□□□ -0.43
PHACTR4-204ENST00000493669 C10orf71Q711Q0 1435 aa12.38□□□□□ -0.43
PHACTR4-204ENST00000493669 FKBP1AP62942 108 aaKnown RBP12.38□□□□□ -0.43
PHACTR4-204ENST00000493669 GALNT17Q6IS24 598 aa12.38□□□□□ -0.43
PHACTR4-204ENST00000493669 KRBA2Q6ZNG9 492 aa12.38□□□□□ -0.43
PHACTR4-204ENST00000493669 DHX40Q8IX18 779 aaKnown RBP12.38□□□□□ -0.43
PHACTR4-204ENST00000493669 FERMT2Q96AC1 680 aa12.38□□□□□ -0.43
PHACTR4-204ENST00000493669 CLIC6Q96NY7 704 aa12.38□□□□□ -0.43
PHACTR4-204ENST00000493669 TRIM5Q9C035 493 aa12.38□□□□□ -0.43
PHACTR4-204ENST00000493669 MYO3BQ8WXR4 1341 aa12.38□□□□□ -0.43
PHACTR4-204ENST00000493669 SMARCA1P28370 1054 aa12.37□□□□□ -0.43
PHACTR4-204ENST00000493669 HHIPL2Q6UWX4 724 aa12.37□□□□□ -0.43
PHACTR4-204ENST00000493669 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.37□□□□□ -0.43
PHACTR4-204ENST00000493669 MRFAP1L1Q96HT8 127 aa12.37□□□□□ -0.43
PHACTR4-204ENST00000493669 RIMBP2O15034 1052 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms