RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 CYP2D7A0A087X1C5 515 aa8.34□□□□□ -1.07
TOP3A-207ENST00000493648 GNRH1P01148 92 aa8.34□□□□□ -1.07
TOP3A-207ENST00000493648 SLC3A2P08195 630 aaKnown RBP8.34□□□□□ -1.07
TOP3A-207ENST00000493648 HOXA7P31268 230 aaPredicted RBP8.34□□□□□ -1.07
TOP3A-207ENST00000493648 USP14P54578 494 aa8.34□□□□□ -1.07
TOP3A-207ENST00000493648 LACTBP83111 547 aaPredicted RBP8.34□□□□□ -1.07
TOP3A-207ENST00000493648 SEPT2Q15019 361 aa8.34□□□□□ -1.07
TOP3A-207ENST00000493648 SHROOM1Q2M3G4 852 aaPredicted RBP8.34□□□□□ -1.07
TOP3A-207ENST00000493648 MCMDC2Q4G0Z9 681 aa8.34□□□□□ -1.07
TOP3A-207ENST00000493648 TREML2Q5T2D2 321 aa8.34□□□□□ -1.07
TOP3A-207ENST00000493648 TMEM179Q6ZVK1 233 aa8.34□□□□□ -1.07
TOP3A-207ENST00000493648 C16orf86Q6ZW13 317 aa8.34□□□□□ -1.07
TOP3A-207ENST00000493648 OTOP1Q7RTM1 612 aa8.34□□□□□ -1.07
TOP3A-207ENST00000493648 SEC62Q99442 399 aaKnown RBP8.34□□□□□ -1.07
TOP3A-207ENST00000493648 NAPBQ9H115 298 aa8.34□□□□□ -1.07
TOP3A-207ENST00000493648 MKNK2Q9HBH9 465 aa8.34□□□□□ -1.07
TOP3A-207ENST00000493648 PTPRFP10586 1907 aa8.34□□□□□ -1.07
TOP3A-207ENST00000493648 HIP1O00291 1037 aa8.33□□□□□ -1.08
TOP3A-207ENST00000493648 FMNL1O95466 1100 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-207ENST00000493648 HOXD10P28358 340 aa8.33□□□□□ -1.08
TOP3A-207ENST00000493648 GCLCP48506 637 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-207ENST00000493648 MFAP1P55081 439 aaKnown RBP8.33□□□□□ -1.08
TOP3A-207ENST00000493648 PRMT2P55345 433 aa8.33□□□□□ -1.08
TOP3A-207ENST00000493648 IRX3P78415 501 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-207ENST00000493648 EVX2Q03828 476 aa8.33□□□□□ -1.08
TOP3A-207ENST00000493648 ZNF444Q8N0Y2 327 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-207ENST00000493648 SLC44A5Q8NCS7 719 aa8.33□□□□□ -1.08
TOP3A-207ENST00000493648 C12orf42Q96LP6 360 aa8.33□□□□□ -1.08
TOP3A-207ENST00000493648 KIAA1683Q9H0B3 1180 aa8.33□□□□□ -1.08
TOP3A-207ENST00000493648 ASCC2Q9H1I8 757 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-207ENST00000493648 ARHGEF10LQ9HCE6 1279 aa8.33□□□□□ -1.08
TOP3A-207ENST00000493648 EMILIN3Q9NT22 766 aa8.33□□□□□ -1.08
TOP3A-207ENST00000493648 HPS5Q9UPZ3 1129 aa8.33□□□□□ -1.08
TOP3A-207ENST00000493648 PTPN22Q9Y2R2 807 aa8.33□□□□□ -1.08
TOP3A-207ENST00000493648 MYH8P13535 1937 aa8.33□□□□□ -1.08
TOP3A-207ENST00000493648 ADGRA2Q96PE1 1338 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 DDX60LQ5H9U9 1706 aaKnown RBP8.32□□□□□ -1.08
TOP3A-207ENST00000493648 USP17L15C9J2P7 530 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 USP17L13C9JLJ4 530 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 USP17L11C9JVI0 530 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 USP17L18D6R9N7 530 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 USP17L22D6RA61 530 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 USP17L17D6RBQ6 530 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 USP17L19D6RCP7 530 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 USP17L20D6RJB6 530 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 PITPNM1O00562 1244 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 BCRP11274 1271 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 AKR1B1P15121 316 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 SDSP20132 328 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 GUCY1A2P33402 732 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 PSMC4P43686 418 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 FXR2P51116 673 aaKnown RBP eCLIP8.32□□□□□ -1.08
TOP3A-207ENST00000493648 FCGRTP55899 365 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 PDE4BQ07343 736 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 USP17L24Q0WX57 530 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 ZYXQ15942 572 aaKnown RBP8.32□□□□□ -1.08
TOP3A-207ENST00000493648 STK11IPQ8N1F8 1099 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 ANKRD13CQ8N6S4 541 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 ACER1Q8TDN7 264 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 GTF3C2Q8WUA4 911 aaPredicted RBP8.32□□□□□ -1.08
TOP3A-207ENST00000493648 P2RX7Q99572 595 aaKnown RBP8.32□□□□□ -1.08
TOP3A-207ENST00000493648 SH2D4AQ9H788 454 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 KANSL2Q9H9L4 492 aa8.32□□□□□ -1.08
TOP3A-207ENST00000493648 EPB41L4AQ9HCS5 686 aaPredicted RBP8.32□□□□□ -1.08
TOP3A-207ENST00000493648 LOC285556D6RIA3 1793 aa8.31□□□□□ -1.08
TOP3A-207ENST00000493648 SMIM22K7EJ46 135 aa8.31□□□□□ -1.08
TOP3A-207ENST00000493648 ECM2O94769 699 aaPredicted RBP8.31□□□□□ -1.08
TOP3A-207ENST00000493648 PDE4AP27815 886 aa8.31□□□□□ -1.08
TOP3A-207ENST00000493648 ATP2B2Q01814 1243 aa8.31□□□□□ -1.08
TOP3A-207ENST00000493648 ICA1Q05084 483 aa8.31□□□□□ -1.08
TOP3A-207ENST00000493648 PPARAQ07869 468 aa8.31□□□□□ -1.08
TOP3A-207ENST00000493648 NMIQ13287 307 aaPredicted RBP8.31□□□□□ -1.08
TOP3A-207ENST00000493648 ALX1Q15699 326 aa8.31□□□□□ -1.08
TOP3A-207ENST00000493648 FAM110CQ1W6H9 321 aa8.31□□□□□ -1.08
TOP3A-207ENST00000493648 CATSPERGQ6ZRH7 1159 aa8.31□□□□□ -1.08
TOP3A-207ENST00000493648 CCDC129Q6ZRS4 1044 aa8.31□□□□□ -1.08
TOP3A-207ENST00000493648 NBPF11Q86T75 865 aa8.31□□□□□ -1.08
TOP3A-207ENST00000493648 FAM227BQ96M60 508 aa8.31□□□□□ -1.08
TOP3A-207ENST00000493648 ARHGAP39Q9C0H5 1083 aa8.31□□□□□ -1.08
TOP3A-207ENST00000493648 DIAPH3Q9NSV4 1193 aa8.31□□□□□ -1.08
TOP3A-207ENST00000493648 FOXD4L1Q9NU39 408 aa8.31□□□□□ -1.08
TOP3A-207ENST00000493648 TMX2Q9Y320 296 aa8.31□□□□□ -1.08
TOP3A-207ENST00000493648 A0A0D9SFI3 127 aa8.3□□□□□ -1.08
TOP3A-207ENST00000493648 A0A1W2PRG0 241 aa8.3□□□□□ -1.08
TOP3A-207ENST00000493648 HSPD1P10809 573 aaKnown RBP8.3□□□□□ -1.08
TOP3A-207ENST00000493648 EEF2P13639 858 aaKnown RBP8.3□□□□□ -1.08
TOP3A-207ENST00000493648 VCAM1P19320 739 aa8.3□□□□□ -1.08
TOP3A-207ENST00000493648 RASA1P20936 1047 aa8.3□□□□□ -1.08
TOP3A-207ENST00000493648 HERVK_113P62684 666 aa8.3□□□□□ -1.08
TOP3A-207ENST00000493648 COG2Q14746 738 aa8.3□□□□□ -1.08
TOP3A-207ENST00000493648 TTC22Q5TAA0 569 aa8.3□□□□□ -1.08
TOP3A-207ENST00000493648 CWC27Q6UX04 472 aaKnown RBP8.3□□□□□ -1.08
TOP3A-207ENST00000493648 SIAH1Q8IUQ4 282 aa8.3□□□□□ -1.08
TOP3A-207ENST00000493648 CCAR1Q8IX12 1150 aaKnown RBP8.3□□□□□ -1.08
TOP3A-207ENST00000493648 GPRC5AQ8NFJ5 357 aa8.3□□□□□ -1.08
TOP3A-207ENST00000493648 RAET1EQ8TD07 263 aa8.3□□□□□ -1.08
TOP3A-207ENST00000493648 LPAR1Q92633 364 aa8.3□□□□□ -1.08
TOP3A-207ENST00000493648 COA7Q96BR5 231 aa8.3□□□□□ -1.08
TOP3A-207ENST00000493648 TRIM47Q96LD4 638 aa8.3□□□□□ -1.08
TOP3A-207ENST00000493648 RPAP3Q9H6T3 665 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms