RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 ANKRD13CQ8N6S4 541 aa11.3□□□□□ -0.6
SGIP1-213ENST00000493564 PROCA1Q8NCQ7 364 aaPredicted RBP11.3□□□□□ -0.6
SGIP1-213ENST00000493564 P2RX7Q99572 595 aaKnown RBP11.3□□□□□ -0.6
SGIP1-213ENST00000493564 ASCC2Q9H1I8 757 aaPredicted RBP11.3□□□□□ -0.6
SGIP1-213ENST00000493564 PTPN22Q9Y2R2 807 aa11.3□□□□□ -0.6
SGIP1-213ENST00000493564 ADGRA2Q96PE1 1338 aa11.3□□□□□ -0.6
SGIP1-213ENST00000493564 A0A0D9SFI3 127 aa11.29□□□□□ -0.6
SGIP1-213ENST00000493564 A0A1W2PRG0 241 aa11.29□□□□□ -0.6
SGIP1-213ENST00000493564 PRDM1O75626 825 aa11.29□□□□□ -0.6
SGIP1-213ENST00000493564 BCRP11274 1271 aa11.29□□□□□ -0.6
SGIP1-213ENST00000493564 OSBPP22059 807 aa11.29□□□□□ -0.6
SGIP1-213ENST00000493564 ATP2B2Q01814 1243 aa11.29□□□□□ -0.6
SGIP1-213ENST00000493564 SBK1Q52WX2 424 aa11.29□□□□□ -0.6
SGIP1-213ENST00000493564 VPS53Q5VIR6 699 aa11.29□□□□□ -0.6
SGIP1-213ENST00000493564 GIMAP6Q6P9H5 292 aa11.29□□□□□ -0.6
SGIP1-213ENST00000493564 C16orf86Q6ZW13 317 aa11.29□□□□□ -0.6
SGIP1-213ENST00000493564 OSBPL3Q9H4L5 887 aa11.29□□□□□ -0.6
SGIP1-213ENST00000493564 MKNK2Q9HBH9 465 aa11.29□□□□□ -0.6
SGIP1-213ENST00000493564 INCENPQ9NQS7 918 aa11.29□□□□□ -0.6
SGIP1-213ENST00000493564 ARPP21Q9UBL0 812 aaPredicted RBP11.29□□□□□ -0.6
SGIP1-213ENST00000493564 SLC45A1Q9Y2W3 748 aa11.29□□□□□ -0.6
SGIP1-213ENST00000493564 MYCP01106 439 aaPredicted RBP11.28□□□□□ -0.6
SGIP1-213ENST00000493564 SDSP20132 328 aa11.28□□□□□ -0.6
SGIP1-213ENST00000493564 IRX3P78415 501 aaPredicted RBP11.28□□□□□ -0.6
SGIP1-213ENST00000493564 PABPC4Q13310 644 aaKnown RBP eCLIP11.28□□□□□ -0.6
SGIP1-213ENST00000493564 MCMDC2Q4G0Z9 681 aa11.28□□□□□ -0.6
SGIP1-213ENST00000493564 TMEM179Q6ZVK1 233 aa11.28□□□□□ -0.6
SGIP1-213ENST00000493564 SIAH1Q8IUQ4 282 aa11.28□□□□□ -0.6
SGIP1-213ENST00000493564 TRIM47Q96LD4 638 aa11.28□□□□□ -0.6
SGIP1-213ENST00000493564 NACAP1Q9BZK3 213 aa11.28□□□□□ -0.6
SGIP1-213ENST00000493564 NAPBQ9H115 298 aa11.28□□□□□ -0.6
SGIP1-213ENST00000493564 HELLSQ9NRZ9 838 aa11.28□□□□□ -0.6
SGIP1-213ENST00000493564 PNMA3Q9UL41 463 aa11.28□□□□□ -0.6
SGIP1-213ENST00000493564 PTPRFP10586 1907 aa11.27□□□□□ -0.6
SGIP1-213ENST00000493564 DDX60LQ5H9U9 1706 aaKnown RBP11.27□□□□□ -0.61
SGIP1-213ENST00000493564 FOXP2O15409 715 aa11.27□□□□□ -0.61
SGIP1-213ENST00000493564 SOX10P56693 466 aa11.27□□□□□ -0.61
SGIP1-213ENST00000493564 CTDSPL2Q05D32 466 aa11.27□□□□□ -0.61
SGIP1-213ENST00000493564 ARHGEF6Q15052 776 aa11.27□□□□□ -0.61
SGIP1-213ENST00000493564 KIAA1755Q5JYT7 1200 aa11.27□□□□□ -0.61
SGIP1-213ENST00000493564 CWC27Q6UX04 472 aaKnown RBP11.27□□□□□ -0.61
SGIP1-213ENST00000493564 ZNF589Q86UQ0 364 aaPredicted RBP11.27□□□□□ -0.61
SGIP1-213ENST00000493564 SPICE1Q8N0Z3 855 aa11.27□□□□□ -0.61
SGIP1-213ENST00000493564 RNF216Q9NWF9 866 aaPredicted RBP11.27□□□□□ -0.61
SGIP1-213ENST00000493564 PTCH2Q9Y6C5 1203 aa11.27□□□□□ -0.61
SGIP1-213ENST00000493564 ZSWIM8A7E2V4 1837 aa11.26□□□□□ -0.61
SGIP1-213ENST00000493564 RAD21O60216 631 aa11.26□□□□□ -0.61
SGIP1-213ENST00000493564 EEF2P13639 858 aaKnown RBP11.26□□□□□ -0.61
SGIP1-213ENST00000493564 VCAM1P19320 739 aa11.26□□□□□ -0.61
SGIP1-213ENST00000493564 RASA1P20936 1047 aa11.26□□□□□ -0.61
SGIP1-213ENST00000493564 HOXA7P31268 230 aaPredicted RBP11.26□□□□□ -0.61
SGIP1-213ENST00000493564 USP14P54578 494 aa11.26□□□□□ -0.61
SGIP1-213ENST00000493564 ICA1Q05084 483 aa11.26□□□□□ -0.61
SGIP1-213ENST00000493564 PPARAQ07869 468 aa11.26□□□□□ -0.61
SGIP1-213ENST00000493564 FAM47AQ5JRC9 791 aa11.26□□□□□ -0.61
SGIP1-213ENST00000493564 SAMD1Q6SPF0 538 aaPredicted RBP11.26□□□□□ -0.61
SGIP1-213ENST00000493564 SKAP1Q86WV1 359 aa11.26□□□□□ -0.61
SGIP1-213ENST00000493564 ZNF444Q8N0Y2 327 aaPredicted RBP11.26□□□□□ -0.61
SGIP1-213ENST00000493564 CCDC17Q96LX7 622 aa11.26□□□□□ -0.61
SGIP1-213ENST00000493564 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.26□□□□□ -0.61
SGIP1-213ENST00000493564 KIAA1683Q9H0B3 1180 aa11.26□□□□□ -0.61
SGIP1-213ENST00000493564 RPAP3Q9H6T3 665 aaPredicted RBP11.26□□□□□ -0.61
SGIP1-213ENST00000493564 GABRQQ9UN88 632 aa11.26□□□□□ -0.61
SGIP1-213ENST00000493564 USP17L15C9J2P7 530 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 USP17L13C9JLJ4 530 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 USP17L11C9JVI0 530 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 USP17L18D6R9N7 530 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 USP17L22D6RA61 530 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 USP17L17D6RBQ6 530 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 USP17L19D6RCP7 530 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 USP17L20D6RJB6 530 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 FGAP02671 866 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 HSPD1P10809 573 aaKnown RBP11.25□□□□□ -0.61
SGIP1-213ENST00000493564 GSPT1P15170 499 aaKnown RBP11.25□□□□□ -0.61
SGIP1-213ENST00000493564 GCLCP48506 637 aaPredicted RBP11.25□□□□□ -0.61
SGIP1-213ENST00000493564 FCGRTP55899 365 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 HERVK_113P62684 666 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 USP17L24Q0WX57 530 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 Q3C1V9 767 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 POTEEQ6S8J3 1075 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 CATSPERGQ6ZRH7 1159 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 SH3TC2Q8TF17 1288 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 CHMP4CQ96CF2 233 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 C12orf42Q96LP6 360 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 PAGR1Q9BTK6 254 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 KANSL2Q9H9L4 492 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 ARHGEF10LQ9HCE6 1279 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 TXNRD2Q9NNW7 524 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 RBPJLQ9UBG7 517 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 SRRDQ9UH36 339 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 TAOK2Q9UL54 1235 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 TACC3Q9Y6A5 838 aa11.25□□□□□ -0.61
SGIP1-213ENST00000493564 TNPO2O14787 897 aaKnown RBP11.24□□□□□ -0.61
SGIP1-213ENST00000493564 HOXD10P28358 340 aa11.24□□□□□ -0.61
SGIP1-213ENST00000493564 HAND2P61296 217 aa11.24□□□□□ -0.61
SGIP1-213ENST00000493564 TFAP4Q01664 338 aa11.24□□□□□ -0.61
SGIP1-213ENST00000493564 PRKCZQ05513 592 aa11.24□□□□□ -0.61
SGIP1-213ENST00000493564 TTC22Q5TAA0 569 aa11.24□□□□□ -0.61
SGIP1-213ENST00000493564 RAET1EQ8TD07 263 aa11.24□□□□□ -0.61
SGIP1-213ENST00000493564 TANGO6Q9C0B7 1094 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms