RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 FAM177BA6PVY3 158 aa11.79□□□□□ -0.52
PRPF3-206ENST00000493553 ZNF213O14771 459 aa11.79□□□□□ -0.52
PRPF3-206ENST00000493553 NPHP1O15259 732 aa11.79□□□□□ -0.52
PRPF3-206ENST00000493553 GPAA1O43292 621 aa11.79□□□□□ -0.52
PRPF3-206ENST00000493553 IDH1O75874 414 aaKnown RBP11.79□□□□□ -0.52
PRPF3-206ENST00000493553 MCM5P33992 734 aa11.79□□□□□ -0.52
PRPF3-206ENST00000493553 MRE11P49959 708 aa11.79□□□□□ -0.52
PRPF3-206ENST00000493553 RPS8P62241 208 aaKnown RBP11.79□□□□□ -0.52
PRPF3-206ENST00000493553 CHRNDQ07001 517 aa11.79□□□□□ -0.52
PRPF3-206ENST00000493553 ZNF772Q68DY9 489 aaPredicted RBP11.79□□□□□ -0.52
PRPF3-206ENST00000493553 CCDC83Q8IWF9 413 aa11.79□□□□□ -0.52
PRPF3-206ENST00000493553 NCOA7Q8NI08 942 aa11.79□□□□□ -0.52
PRPF3-206ENST00000493553 AIDAQ96BJ3 306 aa11.79□□□□□ -0.52
PRPF3-206ENST00000493553 MTA3Q9BTC8 594 aa11.79□□□□□ -0.52
PRPF3-206ENST00000493553 AGXT2Q9BYV1 514 aa11.79□□□□□ -0.52
PRPF3-206ENST00000493553 DENND2AQ9ULE3 1009 aa11.79□□□□□ -0.52
PRPF3-206ENST00000493553 LAMB2P55268 1798 aa11.79□□□□□ -0.52
PRPF3-206ENST00000493553 MYH14Q7Z406 1995 aaKnown RBP11.78□□□□□ -0.52
PRPF3-206ENST00000493553 BCORQ6W2J9 1755 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 E7EWF7 191 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 PFKFB2O60825 505 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 PDE6AP16499 860 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 SYT1P21579 422 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 GJB2P29033 226 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 PHKA1P46020 1223 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 RNF144AP50876 292 aaPredicted RBP11.78□□□□□ -0.52
PRPF3-206ENST00000493553 EVCP57679 992 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 ME3Q16798 604 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 SLFNL1Q499Z3 407 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 CCDC129Q6ZRS4 1044 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 TMC4Q7Z404 712 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 VPS37DQ86XT2 251 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 TMEM87AQ8NBN3 555 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 FLAD1Q8NFF5 587 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 GTF3C6Q969F1 213 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 CNNM2Q9H8M5 875 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 SEC31BQ9NQW1 1179 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 TPCN1Q9ULQ1 816 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 ZDHHC9Q9Y397 364 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 ZNF804BA4D1E1 1349 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 PNPLA7Q6ZV29 1317 aa11.78□□□□□ -0.52
PRPF3-206ENST00000493553 A0A1W2PRU2 124 aa11.77□□□□□ -0.53
PRPF3-206ENST00000493553 M0R2C6 588 aa11.77□□□□□ -0.53
PRPF3-206ENST00000493553 PCP11498 1178 aaKnown RBP11.77□□□□□ -0.53
PRPF3-206ENST00000493553 GMPRP36959 345 aa11.77□□□□□ -0.53
PRPF3-206ENST00000493553 EXOSC10Q01780 885 aaKnown RBP11.77□□□□□ -0.53
PRPF3-206ENST00000493553 TOB2Q14106 344 aaPredicted RBP11.77□□□□□ -0.53
PRPF3-206ENST00000493553 LARP1BQ659C4 914 aaKnown RBP11.77□□□□□ -0.53
PRPF3-206ENST00000493553 TBC1D9BQ66K14 1250 aa11.77□□□□□ -0.53
PRPF3-206ENST00000493553 SPTY2D1Q68D10 685 aaPredicted RBP11.77□□□□□ -0.53
PRPF3-206ENST00000493553 ATL3Q6DD88 541 aa11.77□□□□□ -0.53
PRPF3-206ENST00000493553 CPLX2Q6PUV4 134 aaKnown RBP11.77□□□□□ -0.53
PRPF3-206ENST00000493553 KRT27Q7Z3Y8 459 aa11.77□□□□□ -0.53
PRPF3-206ENST00000493553 CERS3Q8IU89 383 aa11.77□□□□□ -0.53
PRPF3-206ENST00000493553 SEC62Q99442 399 aaKnown RBP11.77□□□□□ -0.53
PRPF3-206ENST00000493553 LMBRD1Q9NUN5 540 aa11.77□□□□□ -0.53
PRPF3-206ENST00000493553 SCN7AQ01118 1682 aa11.77□□□□□ -0.53
PRPF3-206ENST00000493553 FSD2A1L4K1 749 aa11.76□□□□□ -0.53
PRPF3-206ENST00000493553 PATL2C9JE40 543 aaKnown RBP11.76□□□□□ -0.53
PRPF3-206ENST00000493553 LETM1O95202 739 aaPredicted RBP11.76□□□□□ -0.53
PRPF3-206ENST00000493553 F13A1P00488 732 aa11.76□□□□□ -0.53
PRPF3-206ENST00000493553 MYCP01106 439 aaPredicted RBP11.76□□□□□ -0.53
PRPF3-206ENST00000493553 FGAP02671 866 aa11.76□□□□□ -0.53
PRPF3-206ENST00000493553 GPC1P35052 558 aa11.76□□□□□ -0.53
PRPF3-206ENST00000493553 RASGRF1Q13972 1273 aa11.76□□□□□ -0.53
PRPF3-206ENST00000493553 Q6ZUG5 572 aa11.76□□□□□ -0.53
PRPF3-206ENST00000493553 RNF135Q8IUD6 432 aa11.76□□□□□ -0.53
PRPF3-206ENST00000493553 CCDC155Q8N6L0 562 aa11.76□□□□□ -0.53
PRPF3-206ENST00000493553 CNBD1Q8NA66 436 aa11.76□□□□□ -0.53
PRPF3-206ENST00000493553 FAM184AQ8NB25 1140 aa11.76□□□□□ -0.53
PRPF3-206ENST00000493553 ANP32BQ92688 251 aaKnown RBP11.76□□□□□ -0.53
PRPF3-206ENST00000493553 RNF41Q9H4P4 317 aaPredicted RBP11.76□□□□□ -0.53
PRPF3-206ENST00000493553 ZSCAN16Q9H4T2 348 aaPredicted RBP11.76□□□□□ -0.53
PRPF3-206ENST00000493553 PIH1D3Q9NQM4 214 aaKnown RBP11.76□□□□□ -0.53
PRPF3-206ENST00000493553 LRP2BPQ9P2M1 347 aa11.76□□□□□ -0.53
PRPF3-206ENST00000493553 MINPP1Q9UNW1 487 aa11.76□□□□□ -0.53
PRPF3-206ENST00000493553 LEMD3Q9Y2U8 911 aa11.76□□□□□ -0.53
PRPF3-206ENST00000493553 ZNF532Q9HCE3 1301 aa11.76□□□□□ -0.53
PRPF3-206ENST00000493553 BTAF1O14981 1849 aa11.76□□□□□ -0.53
PRPF3-206ENST00000493553 SLC35F4A4IF30 521 aa11.75□□□□□ -0.53
PRPF3-206ENST00000493553 PRPF40AO75400 957 aaKnown RBP11.75□□□□□ -0.53
PRPF3-206ENST00000493553 CDKL5O76039 1030 aa11.75□□□□□ -0.53
PRPF3-206ENST00000493553 APPP05067 770 aa11.75□□□□□ -0.53
PRPF3-206ENST00000493553 CPA1P15085 419 aa11.75□□□□□ -0.53
PRPF3-206ENST00000493553 RBM6P78332 1123 aaKnown RBP11.75□□□□□ -0.53
PRPF3-206ENST00000493553 ST5P78524 1137 aa11.75□□□□□ -0.53
PRPF3-206ENST00000493553 SEMA3FQ13275 785 aa11.75□□□□□ -0.53
PRPF3-206ENST00000493553 CLN3Q13286 438 aa11.75□□□□□ -0.53
PRPF3-206ENST00000493553 NAA16Q6N069 864 aaPredicted RBP11.75□□□□□ -0.53
PRPF3-206ENST00000493553 GIMAP6Q6P9H5 292 aa11.75□□□□□ -0.53
PRPF3-206ENST00000493553 TMTC2Q8N394 836 aa11.75□□□□□ -0.53
PRPF3-206ENST00000493553 BRF1Q92994 677 aa11.75□□□□□ -0.53
PRPF3-206ENST00000493553 POM121Q96HA1 1249 aa11.75□□□□□ -0.53
PRPF3-206ENST00000493553 TMEM87BQ96K49 555 aa11.75□□□□□ -0.53
PRPF3-206ENST00000493553 STRBPQ96SI9 672 aaKnown RBP11.75□□□□□ -0.53
PRPF3-206ENST00000493553 KRT23Q9C075 422 aa11.75□□□□□ -0.53
PRPF3-206ENST00000493553 DOLKQ9UPQ8 538 aa11.75□□□□□ -0.53
PRPF3-206ENST00000493553 ARAP2Q8WZ64 1704 aa11.74□□□□□ -0.53
PRPF3-206ENST00000493553 TCRBV5S4A2TA0A5A2 114 aa11.74□□□□□ -0.53
PRPF3-206ENST00000493553 MEN1O00255 615 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms