RNA–Protein interactions for RNA: ENST00000493132.1

MMP11-213, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-213ENST00000493132 C16orf86Q6ZW13 317 aa16.73■□□□□ 0.27
MMP11-213ENST00000493132 ACER1Q8TDN7 264 aa16.73■□□□□ 0.27
MMP11-213ENST00000493132 CCDC136Q96JN2 1154 aa16.73■□□□□ 0.27
MMP11-213ENST00000493132 FAM227BQ96M60 508 aa16.73■□□□□ 0.27
MMP11-213ENST00000493132 NACAP1Q9BZK3 213 aa16.73■□□□□ 0.27
MMP11-213ENST00000493132 NAPBQ9H115 298 aa16.73■□□□□ 0.27
MMP11-213ENST00000493132 HTTP42858 3142 aa16.72■□□□□ 0.27
MMP11-213ENST00000493132 C19orf81C9J6K1 198 aa16.72■□□□□ 0.27
MMP11-213ENST00000493132 OSBPP22059 807 aa16.72■□□□□ 0.27
MMP11-213ENST00000493132 GUCY1A2P33402 732 aa16.72■□□□□ 0.27
MMP11-213ENST00000493132 ARHGEF6Q15052 776 aa16.72■□□□□ 0.27
MMP11-213ENST00000493132 GIMAP6Q6P9H5 292 aa16.72■□□□□ 0.27
MMP11-213ENST00000493132 USP17L2Q6R6M4 530 aa16.72■□□□□ 0.27
MMP11-213ENST00000493132 TMEM179Q6ZVK1 233 aa16.72■□□□□ 0.27
MMP11-213ENST00000493132 ASCC2Q9H1I8 757 aaPredicted RBP16.72■□□□□ 0.27
MMP11-213ENST00000493132 ROBO3Q96MS0 1386 aa16.72■□□□□ 0.27
MMP11-213ENST00000493132 GREB1LQ9C091 1923 aaPredicted RBP16.72■□□□□ 0.27
MMP11-213ENST00000493132 MYH4Q9Y623 1939 aa16.72■□□□□ 0.27
MMP11-213ENST00000493132 PATL2C9JE40 543 aaKnown RBP16.71■□□□□ 0.27
MMP11-213ENST00000493132 PDE4AP27815 886 aa16.71■□□□□ 0.27
MMP11-213ENST00000493132 ATP2B2Q01814 1243 aa16.71■□□□□ 0.27
MMP11-213ENST00000493132 ICA1Q05084 483 aa16.71■□□□□ 0.27
MMP11-213ENST00000493132 NMIQ13287 307 aaPredicted RBP16.71■□□□□ 0.27
MMP11-213ENST00000493132 SBK1Q52WX2 424 aa16.71■□□□□ 0.27
MMP11-213ENST00000493132 IFNL3Q8IZI9 196 aa16.71■□□□□ 0.27
MMP11-213ENST00000493132 ANKRD13CQ8N6S4 541 aa16.71■□□□□ 0.27
MMP11-213ENST00000493132 EMILIN3Q9NT22 766 aa16.71■□□□□ 0.27
MMP11-213ENST00000493132 FMNL1O95466 1100 aaPredicted RBP16.7■□□□□ 0.26
MMP11-213ENST00000493132 BCRP11274 1271 aa16.7■□□□□ 0.26
MMP11-213ENST00000493132 PSMC4P43686 418 aa16.7■□□□□ 0.26
MMP11-213ENST00000493132 USP14P54578 494 aa16.7■□□□□ 0.26
MMP11-213ENST00000493132 OSBPL3Q9H4L5 887 aa16.7■□□□□ 0.26
MMP11-213ENST00000493132 MKNK2Q9HBH9 465 aa16.7■□□□□ 0.26
MMP11-213ENST00000493132 DIAPH3Q9NSV4 1193 aa16.7■□□□□ 0.26
MMP11-213ENST00000493132 PRDM1O75626 825 aa16.69■□□□□ 0.26
MMP11-213ENST00000493132 VCAM1P19320 739 aa16.69■□□□□ 0.26
MMP11-213ENST00000493132 VPS53Q5VIR6 699 aa16.69■□□□□ 0.26
MMP11-213ENST00000493132 TRIM47Q96LD4 638 aa16.69■□□□□ 0.26
MMP11-213ENST00000493132 CCDC17Q96LX7 622 aa16.69■□□□□ 0.26
MMP11-213ENST00000493132 KIAA1683Q9H0B3 1180 aa16.69■□□□□ 0.26
MMP11-213ENST00000493132 ARHGEF10LQ9HCE6 1279 aa16.69■□□□□ 0.26
MMP11-213ENST00000493132 HELLSQ9NRZ9 838 aa16.69■□□□□ 0.26
MMP11-213ENST00000493132 TAOK2Q9UL54 1235 aa16.69■□□□□ 0.26
MMP11-213ENST00000493132 PTPN22Q9Y2R2 807 aa16.69■□□□□ 0.26
MMP11-213ENST00000493132 PTCH2Q9Y6C5 1203 aa16.69■□□□□ 0.26
MMP11-213ENST00000493132 LAMA4Q16363 1823 aa16.68■□□□□ 0.26
MMP11-213ENST00000493132 RAD21O60216 631 aa16.68■□□□□ 0.26
MMP11-213ENST00000493132 RASA1P20936 1047 aa16.68■□□□□ 0.26
MMP11-213ENST00000493132 CTGFP29279 349 aa16.68■□□□□ 0.26
MMP11-213ENST00000493132 FCGRTP55899 365 aa16.68■□□□□ 0.26
MMP11-213ENST00000493132 SOX10P56693 466 aa16.68■□□□□ 0.26
MMP11-213ENST00000493132 MCMDC2Q4G0Z9 681 aa16.68■□□□□ 0.26
MMP11-213ENST00000493132 ZNF589Q86UQ0 364 aaPredicted RBP16.68■□□□□ 0.26
MMP11-213ENST00000493132 DOCK3Q8IZD9 2030 aa16.68■□□□□ 0.26
MMP11-213ENST00000493132 CCDC171Q6TFL3 1326 aa16.68■□□□□ 0.26
MMP11-213ENST00000493132 A0A1W2PRG0 241 aa16.67■□□□□ 0.26
MMP11-213ENST00000493132 FOXP2O15409 715 aa16.67■□□□□ 0.26
MMP11-213ENST00000493132 SLC3A2P08195 630 aaKnown RBP16.67■□□□□ 0.26
MMP11-213ENST00000493132 SDSP20132 328 aa16.67■□□□□ 0.26
MMP11-213ENST00000493132 GCLCP48506 637 aaPredicted RBP16.67■□□□□ 0.26
MMP11-213ENST00000493132 HERVK_113P62684 666 aa16.67■□□□□ 0.26
MMP11-213ENST00000493132 PPARAQ07869 468 aa16.67■□□□□ 0.26
MMP11-213ENST00000493132 C12orf42Q96LP6 360 aa16.67■□□□□ 0.26
MMP11-213ENST00000493132 PAGR1Q9BTK6 254 aa16.67■□□□□ 0.26
MMP11-213ENST00000493132 TANGO6Q9C0B7 1094 aa16.67■□□□□ 0.26
MMP11-213ENST00000493132 RPAP3Q9H6T3 665 aaPredicted RBP16.67■□□□□ 0.26
MMP11-213ENST00000493132 SH2D4AQ9H788 454 aa16.67■□□□□ 0.26
MMP11-213ENST00000493132 MYPNQ86TC9 1320 aa16.67■□□□□ 0.26
MMP11-213ENST00000493132 CENPFP49454 3210 aa16.66■□□□□ 0.26
MMP11-213ENST00000493132 PARP14Q460N5 1801 aa16.66■□□□□ 0.26
MMP11-213ENST00000493132 TNPO2O14787 897 aaKnown RBP16.66■□□□□ 0.26
MMP11-213ENST00000493132 PEX10O60683 326 aa16.66■□□□□ 0.26
MMP11-213ENST00000493132 HOXA7P31268 230 aaPredicted RBP16.66■□□□□ 0.26
MMP11-213ENST00000493132 FAM110CQ1W6H9 321 aa16.66■□□□□ 0.26
MMP11-213ENST00000493132 SLC9C1Q4G0N8 1177 aa16.66■□□□□ 0.26
MMP11-213ENST00000493132 TTC22Q5TAA0 569 aa16.66■□□□□ 0.26
MMP11-213ENST00000493132 SAMD1Q6SPF0 538 aaPredicted RBP16.66■□□□□ 0.26
MMP11-213ENST00000493132 CWC27Q6UX04 472 aaKnown RBP16.66■□□□□ 0.26
MMP11-213ENST00000493132 SPICE1Q8N0Z3 855 aa16.66■□□□□ 0.26
MMP11-213ENST00000493132 P2RX7Q99572 595 aaKnown RBP16.66■□□□□ 0.26
MMP11-213ENST00000493132 ZNF287Q9HBT7 754 aa16.66■□□□□ 0.26
MMP11-213ENST00000493132 USP17L15C9J2P7 530 aa16.65■□□□□ 0.26
MMP11-213ENST00000493132 USP17L13C9JLJ4 530 aa16.65■□□□□ 0.26
MMP11-213ENST00000493132 USP17L11C9JVI0 530 aa16.65■□□□□ 0.26
MMP11-213ENST00000493132 USP17L18D6R9N7 530 aa16.65■□□□□ 0.26
MMP11-213ENST00000493132 USP17L22D6RA61 530 aa16.65■□□□□ 0.26
MMP11-213ENST00000493132 USP17L17D6RBQ6 530 aa16.65■□□□□ 0.26
MMP11-213ENST00000493132 USP17L19D6RCP7 530 aa16.65■□□□□ 0.26
MMP11-213ENST00000493132 USP17L20D6RJB6 530 aa16.65■□□□□ 0.26
MMP11-213ENST00000493132 EEF2P13639 858 aaKnown RBP16.65■□□□□ 0.26
MMP11-213ENST00000493132 GSPT1P15170 499 aaKnown RBP16.65■□□□□ 0.26
MMP11-213ENST00000493132 PRKCZQ05513 592 aa16.65■□□□□ 0.26
MMP11-213ENST00000493132 CTDSPL2Q05D32 466 aa16.65■□□□□ 0.26
MMP11-213ENST00000493132 PDE4BQ07343 736 aa16.65■□□□□ 0.26
MMP11-213ENST00000493132 USP17L24Q0WX57 530 aa16.65■□□□□ 0.26
MMP11-213ENST00000493132 ZNF444Q8N0Y2 327 aaPredicted RBP16.65■□□□□ 0.26
MMP11-213ENST00000493132 HIP1O00291 1037 aa16.64■□□□□ 0.25
MMP11-213ENST00000493132 MYCP01106 439 aaPredicted RBP16.64■□□□□ 0.25
MMP11-213ENST00000493132 GNRH1P01148 92 aa16.64■□□□□ 0.25
MMP11-213ENST00000493132 HOXD10P28358 340 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms