RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 DPYDQ12882 1025 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 MOGSQ13724 837 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 PKN1Q16512 942 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 C21orf62-AS1Q17RA5 79 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 C1orf228Q6PIY5 440 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 LARP1Q6PKG0 1096 aaKnown RBP4.86□□□□□ -1.63
BRCA1-220ENST00000492859 BLOC1S3Q6QNY0 202 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 TBC1D1Q86TI0 1168 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-220ENST00000492859 TRIM74Q86UV6 250 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 TRIM73Q86UV7 250 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 RNF135Q8IUD6 432 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 C7orf61Q8IZ16 206 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 CARNMT1Q8N4J0 409 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 TAB3Q8N5C8 712 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-220ENST00000492859 UBR7Q8N806 425 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 EPS8L1Q8TE68 723 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 NUP133Q8WUM0 1156 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 USP6NLQ92738 828 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 HOOK2Q96ED9 719 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 PRIMPOLQ96LW4 560 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 BAG1Q99933 345 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-220ENST00000492859 TRIM8Q9BZR9 551 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 SLC13A1Q9BZW2 595 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 NCOA5Q9HCD5 579 aaKnown RBP4.86□□□□□ -1.63
BRCA1-220ENST00000492859 RASSF1Q9NS23 344 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 CPSF2Q9P2I0 782 aaKnown RBP4.86□□□□□ -1.63
BRCA1-220ENST00000492859 GIMAP2Q9UG22 337 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 TTLL3Q9Y4R7 772 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 SUPT16HQ9Y5B9 1047 aaKnown RBP4.86□□□□□ -1.63
BRCA1-220ENST00000492859 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.86□□□□□ -1.63
BRCA1-220ENST00000492859 CD2APQ9Y5K6 639 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 TSPY2A6NKD2 308 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 B3GALNT1O75752 331 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 IL33O95760 270 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 IFIT1P09914 478 aaKnown RBP4.85□□□□□ -1.63
BRCA1-220ENST00000492859 TSPY3P0CV98 308 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 TSPY8P0CW00 308 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 KRT10P13645 584 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 HOXD12P35452 270 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 ECE1P42892 770 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 DGKGP49619 791 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 CSE1LP55060 971 aaKnown RBP4.85□□□□□ -1.63
BRCA1-220ENST00000492859 TPD52P55327 224 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-220ENST00000492859 ZNF280AP59817 542 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-220ENST00000492859 TSPY1Q01534 308 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 PRKG2Q13237 762 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 PRPF4BQ13523 1007 aaKnown RBP4.85□□□□□ -1.63
BRCA1-220ENST00000492859 MLECQ14165 292 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 ZSCAN26Q16670 478 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 RRP12Q5JTH9 1297 aaKnown RBP4.85□□□□□ -1.63
BRCA1-220ENST00000492859 AP1ARQ63HQ0 302 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 NUGGCQ68CJ6 796 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 SPOCD1Q6ZMY3 1216 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 BTN2A1Q7KYR7 527 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 BEND5Q7L4P6 421 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 SRLQ86TD4 932 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 CCDC144CPQ8IYA2 1237 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 FAM26EQ8N5C1 309 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 DRAXINQ8NBI3 349 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-220ENST00000492859 SPATA18Q8TC71 538 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 BICD2Q8TD16 824 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 MGARPQ8TDB4 240 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 CABLES1Q8TDN4 633 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 CHAC2Q8WUX2 184 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 TSGA13Q96PP4 275 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 SMAD5Q99717 465 aaKnown RBP4.85□□□□□ -1.63
BRCA1-220ENST00000492859 NACA2Q9H009 215 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 ZNF304Q9HCX3 659 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 NLRC4Q9NPP4 1024 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 STRN4Q9NRL3 753 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 ZNHIT6Q9NWK9 470 aaKnown RBP4.85□□□□□ -1.63
BRCA1-220ENST00000492859 ZFATQ9P243 1243 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 C2CD2Q9Y426 696 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 ATP6V0A2Q9Y487 856 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 SLC30A1Q9Y6M5 507 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 AKNAQ7Z591 1439 aa4.85□□□□□ -1.63
BRCA1-220ENST00000492859 TMEM94Q12767 1356 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 F8VZ95 297 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 H0YHG0 523 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 MYO1BO43795 1136 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 CLASP2O75122 1294 aaKnown RBP4.84□□□□□ -1.63
BRCA1-220ENST00000492859 TIPRLO75663 272 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 TSPY4P0CV99 314 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 TSPY10P0CW01 314 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 GZMAP12544 262 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 SKIP12755 728 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 MZF1P28698 734 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-220ENST00000492859 CD86P42081 329 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 PAPOLAP51003 745 aaKnown RBP4.84□□□□□ -1.63
BRCA1-220ENST00000492859 HDGFP51858 240 aaKnown RBP4.84□□□□□ -1.63
BRCA1-220ENST00000492859 RAC1P63000 192 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 TMF1P82094 1093 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 MRPS35P82673 323 aaKnown RBP4.84□□□□□ -1.63
BRCA1-220ENST00000492859 SARNPP82979 210 aaKnown RBP4.84□□□□□ -1.63
BRCA1-220ENST00000492859 CTDSPL2Q05D32 466 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 EHHADHQ08426 723 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 KRT72Q14CN4 511 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 ACAP1Q15027 740 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 PLCB4Q15147 1175 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 TUBB8Q3ZCM7 444 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms