RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 SPNS2Q8IVW8 549 aa5.69□□□□□ -1.5
UBR4-215ENST00000492606 BADQ92934 168 aa5.69□□□□□ -1.5
UBR4-215ENST00000492606 PRRX2Q99811 253 aa5.69□□□□□ -1.5
UBR4-215ENST00000492606 RTFDC1Q9BY42 306 aaPredicted RBP5.69□□□□□ -1.5
UBR4-215ENST00000492606 TLR9Q9NR96 1032 aa5.69□□□□□ -1.5
UBR4-215ENST00000492606 DLL3Q9NYJ7 618 aa5.69□□□□□ -1.5
UBR4-215ENST00000492606 NOD1Q9Y239 953 aa5.69□□□□□ -1.5
UBR4-215ENST00000492606 MYO9AB2RTY4 2548 aa5.69□□□□□ -1.5
UBR4-215ENST00000492606 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.68□□□□□ -1.5
UBR4-215ENST00000492606 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.68□□□□□ -1.5
UBR4-215ENST00000492606 GRXCR1A8MXD5 290 aa5.68□□□□□ -1.5
UBR4-215ENST00000492606 PATL2C9JE40 543 aaKnown RBP5.68□□□□□ -1.5
UBR4-215ENST00000492606 SIAH2O43255 324 aa5.68□□□□□ -1.5
UBR4-215ENST00000492606 RPS12P25398 132 aaKnown RBP5.68□□□□□ -1.5
UBR4-215ENST00000492606 GTF2IP78347 998 aa5.68□□□□□ -1.5
UBR4-215ENST00000492606 AGERQ15109 404 aa5.68□□□□□ -1.5
UBR4-215ENST00000492606 OXLD1Q5BKU9 147 aa5.68□□□□□ -1.5
UBR4-215ENST00000492606 INTS6LQ5JSJ4 861 aaKnown RBP5.68□□□□□ -1.5
UBR4-215ENST00000492606 C17orf99Q6UX52 265 aa5.68□□□□□ -1.5
UBR4-215ENST00000492606 LIAT1Q6ZQX7 453 aa5.68□□□□□ -1.5
UBR4-215ENST00000492606 PRR23BQ6ZRT6 265 aa5.68□□□□□ -1.5
UBR4-215ENST00000492606 NPM2Q86SE8 214 aaKnown RBP5.68□□□□□ -1.5
UBR4-215ENST00000492606 HERVK_113Q902F9 699 aa5.68□□□□□ -1.5
UBR4-215ENST00000492606 RNPC3Q96LT9 517 aaKnown RBP5.68□□□□□ -1.5
UBR4-215ENST00000492606 KCTD15Q96SI1 283 aaPredicted RBP5.68□□□□□ -1.5
UBR4-215ENST00000492606 FSD1Q9BTV5 496 aa5.68□□□□□ -1.5
UBR4-215ENST00000492606 COG5Q9UP83 839 aa5.68□□□□□ -1.5
UBR4-215ENST00000492606 MAP4K5Q9Y4K4 846 aa5.68□□□□□ -1.5
UBR4-215ENST00000492606 FBN3Q75N90 2809 aa5.68□□□□□ -1.5
UBR4-215ENST00000492606 SCN9AQ15858 1988 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 ITPR1Q14643 2758 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 SFI1A8K8P3 1242 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 ADRB1P08588 477 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 VARSP26640 1264 aaKnown RBP5.67□□□□□ -1.5
UBR4-215ENST00000492606 NF2P35240 595 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 ITGAEP38570 1179 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 NBL1P41271 181 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 WNT7BP56706 349 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 CABP4P57796 275 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 ZNF280AP59817 542 aaPredicted RBP5.67□□□□□ -1.5
UBR4-215ENST00000492606 SWI5Q1ZZU3 235 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 CRY2Q49AN0 593 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 HSP90AB2PQ58FF8 381 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 CCDC102BQ68D86 513 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 SND1Q7KZF4 910 aaKnown RBP eCLIP5.67□□□□□ -1.5
UBR4-215ENST00000492606 TRIM50Q86XT4 487 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 CRACR2BQ8N4Y2 399 aaPredicted RBP5.67□□□□□ -1.5
UBR4-215ENST00000492606 C1orf216Q8TAB5 229 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 CDK15Q96Q40 435 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 PBX4Q9BYU1 374 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 HCSTQ9UBK5 93 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 CPA4Q9UI42 421 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 OGDHLQ9ULD0 1010 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 PCDHB11Q9Y5F2 797 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 IGSF10Q6WRI0 2623 aa5.67□□□□□ -1.5
UBR4-215ENST00000492606 COL4A4P53420 1690 aaPredicted RBP5.66□□□□□ -1.5
UBR4-215ENST00000492606 DOCK3Q8IZD9 2030 aa5.66□□□□□ -1.5
UBR4-215ENST00000492606 CCL15-CCL14A0A0B4J2E2 113 aa5.66□□□□□ -1.5
UBR4-215ENST00000492606 ERVH48-1M5A8F1 160 aa5.66□□□□□ -1.5
UBR4-215ENST00000492606 HOXA10P31260 410 aaPredicted RBP5.66□□□□□ -1.5
UBR4-215ENST00000492606 RPIAP49247 311 aa5.66□□□□□ -1.5
UBR4-215ENST00000492606 ATP1A2P50993 1020 aa5.66□□□□□ -1.5
UBR4-215ENST00000492606 RRS1Q15050 365 aaKnown RBP5.66□□□□□ -1.5
UBR4-215ENST00000492606 CCL15Q16663 113 aa5.66□□□□□ -1.5
UBR4-215ENST00000492606 NBPF20Q3BBV1 942 aa5.66□□□□□ -1.5
UBR4-215ENST00000492606 NBPF9Q3BBW0 867 aa5.66□□□□□ -1.5
UBR4-215ENST00000492606 RNF20Q5VTR2 975 aa5.66□□□□□ -1.5
UBR4-215ENST00000492606 FOXD4L5Q5VV16 416 aaPredicted RBP5.66□□□□□ -1.5
UBR4-215ENST00000492606 TAS1R3Q7RTX0 852 aa5.66□□□□□ -1.5
UBR4-215ENST00000492606 FOXD4L4Q8WXT5 416 aaPredicted RBP5.66□□□□□ -1.5
UBR4-215ENST00000492606 RNF166Q96A37 237 aaPredicted RBP5.66□□□□□ -1.5
UBR4-215ENST00000492606 DBNDD1Q9H9R9 158 aa5.66□□□□□ -1.5
UBR4-215ENST00000492606 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.66□□□□□ -1.5
UBR4-215ENST00000492606 LOC400499M0QZD8 3231 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 A0A087WZG4 1122 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 FAM177BA6PVY3 158 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 TMEM229AB2RXF0 380 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 LGR5O75473 907 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 STAU1O95793 577 aaKnown RBP5.65□□□□□ -1.5
UBR4-215ENST00000492606 ATP2B4P23634 1241 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 IRS1P35568 1242 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 FLT3LGP49771 235 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 VCPP55072 806 aaKnown RBP5.65□□□□□ -1.5
UBR4-215ENST00000492606 SEC13P55735 322 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 ERVK-9P63128 1117 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 USP4Q13107 963 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 ECM1Q16610 540 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 KRT40Q6A162 431 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 BMP8AQ7Z5Y6 402 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 KIAA2013Q8IYS2 634 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 SUPT20HQ8NEM7 779 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 TPCN2Q8NHX9 752 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 ZNF428Q96B54 188 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 PURBQ96QR8 312 aaKnown RBP5.65□□□□□ -1.5
UBR4-215ENST00000492606 OSBPL3Q9H4L5 887 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 TMPRSS4Q9NRS4 437 aa5.65□□□□□ -1.5
UBR4-215ENST00000492606 CDV3Q9UKY7 258 aaKnown RBP5.65□□□□□ -1.5
UBR4-215ENST00000492606 GAKO14976 1311 aa5.65□□□□□ -1.51
UBR4-215ENST00000492606 GBF1Q92538 1859 aa5.64□□□□□ -1.51
UBR4-215ENST00000492606 DUOX1Q9NRD9 1551 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms