RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 MAN1B1Q9UKM7 699 aa23.56■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 KRT13P13646 458 aa23.56■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 DHX40Q8IX18 779 aaKnown RBP23.56■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 RGS22Q8NE09 1264 aa23.56■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 LRRC45Q96CN5 670 aa23.56■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 PSMB7Q99436 277 aa23.56■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 TRAF5O00463 557 aa23.56■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 APOA5Q6Q788 366 aa23.56■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.56■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 H7C1D1 291 aa23.55■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 M0R2C6 588 aa23.55■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 RAPGEF1Q13905 1077 aa23.55■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 FANCBQ8NB91 859 aa23.55■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 GSDMAQ96QA5 445 aa23.55■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 PLVAPQ9BX97 442 aa23.55■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 PTPN12Q05209 780 aaKnown RBP23.55■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 SAMD15Q9P1V8 674 aa23.55■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 PDE8AO60658 829 aa23.55■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 CCDC84Q86UT8 332 aaPredicted RBP23.55■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 CAPS2Q9BXY5 557 aa23.55■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 TLDC2A0PJX2 215 aa23.55■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 NUTM2BA6NNL0 878 aaPredicted RBP23.55■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 NUTM2EB1AL46 878 aaPredicted RBP23.55■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 PRDM1O75626 825 aa23.55■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 DNM2P50570 870 aa23.55■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 SLC9C1Q4G0N8 1177 aa23.55■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 ZNF710Q8N1W2 664 aa23.55■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 KIAA1210Q9ULL0 1709 aa23.54■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 HECW2Q9P2P5 1572 aa23.54■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 hCG_1642624A0A1W2PR95 340 aa23.54■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 IFNL3Q8IZI9 196 aa23.54■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 RUFY4Q6ZNE9 571 aa23.54■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 COPB1P53618 953 aaKnown RBP23.54■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 TNIP1Q15025 636 aa23.54■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 VWA3BQ502W6 1294 aa23.54■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 FOXP1Q9H334 677 aaPredicted RBP23.54■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 FBXO3Q9UK99 471 aa23.54■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 GTPBP6O43824 516 aaPredicted RBP23.54■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 PDE6AP16499 860 aa23.54■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 BCAS4Q8TDM0 211 aa23.54■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 NIP7Q9Y221 180 aaKnown RBP eCLIP23.54■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 ROBO2Q9HCK4 1378 aa23.54■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 UBE4AQ14139 1066 aa23.53■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 CC2D1AQ6P1N0 951 aaPredicted RBP23.53■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 CMTR1Q8N1G2 835 aaKnown RBP23.53■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 PANX2Q96RD6 677 aa23.53■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 LTKP29376 864 aa23.53■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 SYCP3Q8IZU3 236 aa23.53■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 SOWAHDA6NJG2 315 aa23.52■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 CIAO1O76071 339 aa23.52■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 RNASE9P60153 205 aaKnown RBP23.52■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 CSRNP2Q9H175 543 aa23.52■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 PRAMEF22A3QJZ6 481 aa23.52■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 PHKG2P15735 406 aa23.52■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 IQCB1Q15051 598 aa23.52■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 TYW1BQ6NUM6 668 aa23.52■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 SYMPKQ92797 1274 aaKnown RBP23.52■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 MTRF1LQ9UGC7 380 aaKnown RBP23.52■■□□□ 1.36
CHKB-CPT1B-203ENST00000492556 TCIRG1Q13488 830 aa23.51■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 SWAP70Q9UH65 585 aa23.51■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 HYOU1Q9Y4L1 999 aa23.51■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 TNNI2P48788 182 aa23.51■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 TSGA10IPQ3SY00 556 aa23.51■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 SMARCC2Q8TAQ2 1214 aa23.51■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 SAMSN1Q9NSI8 373 aaKnown RBP23.51■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 DENND2AQ9ULE3 1009 aa23.51■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 RNF40O75150 1001 aa23.51■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 RSRC1Q96IZ7 334 aaKnown RBP23.51■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 UBE3CQ15386 1083 aa23.51■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 TMEM132AQ24JP5 1023 aa23.51■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 CABS1Q96KC9 395 aa23.51■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 USP42Q9H9J4 1324 aaKnown RBP23.51■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 FMNL1O95466 1100 aaPredicted RBP23.5■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 SPATS2Q86XZ4 545 aaKnown RBP23.5■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 C2CD5Q86YS7 1000 aa23.5■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 MROH5Q6ZUA9 1318 aa23.5■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 SMIM23A6NLE4 172 aa23.5■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 PPARAQ07869 468 aa23.5■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 OSBP2Q969R2 916 aa23.5■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 ADAM21Q9UKJ8 722 aa23.5■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 CCDC50Q8IVM0 306 aa23.5■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 CCDC65Q8IXS2 484 aa23.5■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 TCP1P17987 556 aaKnown RBP23.5■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 LIG3P49916 1009 aa23.5■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 ORAI2Q96SN7 254 aa23.5■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 CCDC77Q9BR77 488 aa23.5■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 CCZ1BP86790 482 aa23.49■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 CCZ1P86791 482 aaPredicted RBP23.49■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 TTLL7Q6ZT98 887 aa23.49■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 A0A1B0GUA9 196 aa23.49■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 DDX12PQ92771 950 aa23.49■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 FAM207AQ9NSI2 230 aaPredicted RBP23.49■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 CAPN7Q9Y6W3 813 aa23.49■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 A0A1W2PRG0 241 aa23.49■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 EFCAB13Q8IY85 973 aa23.49■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 CCNT1O60563 726 aaKnown RBP23.48■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 CASP8Q14790 479 aa23.48■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 ASIC2Q16515 512 aa23.48■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 KLHL7Q8IXQ5 586 aa23.48■■□□□ 1.35
CHKB-CPT1B-203ENST00000492556 ABCB6Q9NP58 842 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms