RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 TAOK2Q9UL54 1235 aa8.61□□□□□ -1.03
PDLIM1-204ENST00000492511 BRCA2P51587 3418 aa8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 MINDY4BA8MYZ0 360 aa8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 MPHOSPH10O00566 681 aaKnown RBP8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 APPP05067 770 aa8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 RASA1P20936 1047 aa8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 HOXA7P31268 230 aaPredicted RBP8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 LACTBP83111 547 aaPredicted RBP8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 MCMDC2Q4G0Z9 681 aa8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 TTC22Q5TAA0 569 aa8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 USP17L2Q6R6M4 530 aa8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 TMEM179Q6ZVK1 233 aa8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 SKAP1Q86WV1 359 aa8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 CLEC10AQ8IUN9 316 aa8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 ERO1AQ96HE7 468 aa8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 DDRGK1Q96HY6 314 aa8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 C12orf42Q96LP6 360 aa8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 PARK7Q99497 189 aaKnown RBP8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 P2RX7Q99572 595 aaKnown RBP8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 KIAA1683Q9H0B3 1180 aa8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 ASCC2Q9H1I8 757 aaPredicted RBP8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 INCENPQ9NQS7 918 aa8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 TRIM17Q9Y577 477 aa8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 MYH1P12882 1939 aa8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 ROBO3Q96MS0 1386 aa8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 NAV1Q8NEY1 1877 aa8.6□□□□□ -1.03
PDLIM1-204ENST00000492511 IGKV6D-41A0A0C4DH26 115 aa8.59□□□□□ -1.03
PDLIM1-204ENST00000492511 PEX10O60683 326 aa8.59□□□□□ -1.03
PDLIM1-204ENST00000492511 FGAP02671 866 aa8.59□□□□□ -1.03
PDLIM1-204ENST00000492511 HSPD1P10809 573 aaKnown RBP8.59□□□□□ -1.03
PDLIM1-204ENST00000492511 TDO2P48775 406 aa8.59□□□□□ -1.03
PDLIM1-204ENST00000492511 ALX1Q15699 326 aa8.59□□□□□ -1.03
PDLIM1-204ENST00000492511 ZYXQ15942 572 aaKnown RBP8.59□□□□□ -1.03
PDLIM1-204ENST00000492511 AMOTL1Q8IY63 956 aa8.59□□□□□ -1.03
PDLIM1-204ENST00000492511 TRIM47Q96LD4 638 aa8.59□□□□□ -1.03
PDLIM1-204ENST00000492511 CCDC17Q96LX7 622 aa8.59□□□□□ -1.03
PDLIM1-204ENST00000492511 IL25Q9H293 177 aa8.59□□□□□ -1.03
PDLIM1-204ENST00000492511 EFCC1Q9HA90 598 aa8.59□□□□□ -1.03
PDLIM1-204ENST00000492511 TMOD4Q9NZQ9 345 aa8.59□□□□□ -1.03
PDLIM1-204ENST00000492511 HPS5Q9UPZ3 1129 aa8.59□□□□□ -1.03
PDLIM1-204ENST00000492511 PTPN22Q9Y2R2 807 aa8.59□□□□□ -1.03
PDLIM1-204ENST00000492511 MYH7P12883 1935 aa8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 PRDM1O75626 825 aa8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 ECM2O94769 699 aaPredicted RBP8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 EEF2P13639 858 aaKnown RBP8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 OSBPP22059 807 aa8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 PSMC4P43686 418 aa8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 USP14P54578 494 aa8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 CTDSPL2Q05D32 466 aa8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 PPARAQ07869 468 aa8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 FBXO46Q6PJ61 603 aaPredicted RBP8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 CWC27Q6UX04 472 aaKnown RBP8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 CATSPERGQ6ZRH7 1159 aa8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 ANKRD13CQ8N6S4 541 aa8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 NKX2-3Q8TAU0 364 aa8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 NACAP1Q9BZK3 213 aa8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 NAPBQ9H115 298 aa8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 MKNK2Q9HBH9 465 aa8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 TXNRD2Q9NNW7 524 aa8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 RBPJLQ9UBG7 517 aa8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 ANAPC4Q9UJX5 808 aa8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 TMX2Q9Y320 296 aa8.58□□□□□ -1.04
PDLIM1-204ENST00000492511 CCDC171Q6TFL3 1326 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 ATAD5Q96QE3 1844 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 USP17L15C9J2P7 530 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 USP17L13C9JLJ4 530 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 USP17L11C9JVI0 530 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 USP17L18D6R9N7 530 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 USP17L22D6RA61 530 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 USP17L17D6RBQ6 530 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 USP17L19D6RCP7 530 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 USP17L20D6RJB6 530 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 CNMDO75829 334 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 FGRP09769 529 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 VCAM1P19320 739 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 HERVK_113P62684 666 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 ICA1Q05084 483 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 USP17L24Q0WX57 530 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 PABPC4Q13310 644 aaKnown RBP eCLIP8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 Q3C1V9 767 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 FAM47AQ5JRC9 791 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 SMCR8Q8TEV9 937 aaPredicted RBP8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 NBPF3Q9H094 633 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 KANSL2Q9H9L4 492 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 MORF4L1Q9UBU8 362 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 PNMA3Q9UL41 463 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 LOC285556D6RIA3 1793 aa8.57□□□□□ -1.04
PDLIM1-204ENST00000492511 PTPRFP10586 1907 aa8.56□□□□□ -1.04
PDLIM1-204ENST00000492511 BAZ2AQ9UIF9 1905 aaKnown RBP8.56□□□□□ -1.04
PDLIM1-204ENST00000492511 CHMLP26374 656 aa8.56□□□□□ -1.04
PDLIM1-204ENST00000492511 GCLCP48506 637 aaPredicted RBP8.56□□□□□ -1.04
PDLIM1-204ENST00000492511 KIF22Q14807 665 aa8.56□□□□□ -1.04
PDLIM1-204ENST00000492511 FAM110CQ1W6H9 321 aa8.56□□□□□ -1.04
PDLIM1-204ENST00000492511 CENPQQ7L2Z9 268 aaPredicted RBP8.56□□□□□ -1.04
PDLIM1-204ENST00000492511 ZNF444Q8N0Y2 327 aaPredicted RBP8.56□□□□□ -1.04
PDLIM1-204ENST00000492511 NEDD1Q8NHV4 660 aa8.56□□□□□ -1.04
PDLIM1-204ENST00000492511 FEZ1Q99689 392 aa8.56□□□□□ -1.04
PDLIM1-204ENST00000492511 RPAP3Q9H6T3 665 aaPredicted RBP8.56□□□□□ -1.04
PDLIM1-204ENST00000492511 VCPKMTQ9H867 229 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 278.1 ms