RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 CYBAP13498 195 aa14.54□□□□□ -0.08
CACNA1C-228ENST00000492150 HOXA7P31268 230 aaPredicted RBP14.54□□□□□ -0.08
CACNA1C-228ENST00000492150 PPIGQ13427 754 aaKnown RBP eCLIP14.54□□□□□ -0.08
CACNA1C-228ENST00000492150 ZNF280CQ8ND82 737 aa14.54□□□□□ -0.08
CACNA1C-228ENST00000492150 GTF3C2Q8WUA4 911 aaPredicted RBP14.54□□□□□ -0.08
CACNA1C-228ENST00000492150 HLA-CQ95604 372 aa14.54□□□□□ -0.08
CACNA1C-228ENST00000492150 PHOX2BQ99453 314 aa14.54□□□□□ -0.08
CACNA1C-228ENST00000492150 SIL1Q9H173 461 aa14.54□□□□□ -0.08
CACNA1C-228ENST00000492150 NKX2-4Q9H2Z4 354 aa14.54□□□□□ -0.08
CACNA1C-228ENST00000492150 CEP126Q9P2H0 1117 aa14.54□□□□□ -0.08
CACNA1C-228ENST00000492150 FBXO3Q9UK99 471 aa14.54□□□□□ -0.08
CACNA1C-228ENST00000492150 DENND2AQ9ULE3 1009 aa14.54□□□□□ -0.08
CACNA1C-228ENST00000492150 GAKO14976 1311 aa14.54□□□□□ -0.08
CACNA1C-228ENST00000492150 BRWD1Q9NSI6 2320 aa14.54□□□□□ -0.08
CACNA1C-228ENST00000492150 SEMA3EO15041 775 aa14.53□□□□□ -0.08
CACNA1C-228ENST00000492150 ZBTB22O15209 634 aa14.53□□□□□ -0.08
CACNA1C-228ENST00000492150 CIAO1O76071 339 aa14.53□□□□□ -0.08
CACNA1C-228ENST00000492150 ADCYAP1R1P41586 468 aa14.53□□□□□ -0.08
CACNA1C-228ENST00000492150 HMGCS2P54868 508 aa14.53□□□□□ -0.08
CACNA1C-228ENST00000492150 ERVK-9P63128 1117 aa14.53□□□□□ -0.08
CACNA1C-228ENST00000492150 ERVK-24P63145 666 aa14.53□□□□□ -0.08
CACNA1C-228ENST00000492150 IRX3P78415 501 aaPredicted RBP14.53□□□□□ -0.08
CACNA1C-228ENST00000492150 TRPV1Q8NER1 839 aa14.53□□□□□ -0.08
CACNA1C-228ENST00000492150 TOX2Q96NM4 488 aa14.53□□□□□ -0.08
CACNA1C-228ENST00000492150 PORCNQ9H237 461 aa14.53□□□□□ -0.08
CACNA1C-228ENST00000492150 DDX4Q9NQI0 724 aaKnown RBP14.53□□□□□ -0.08
CACNA1C-228ENST00000492150 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.53□□□□□ -0.08
CACNA1C-228ENST00000492150 MTCH2Q9Y6C9 303 aa14.53□□□□□ -0.08
CACNA1C-228ENST00000492150 TIMP1P01033 207 aa14.52□□□□□ -0.09
CACNA1C-228ENST00000492150 ADORA1P30542 326 aa14.52□□□□□ -0.09
CACNA1C-228ENST00000492150 HERVK_113P62684 666 aa14.52□□□□□ -0.09
CACNA1C-228ENST00000492150 SPP2Q13103 211 aa14.52□□□□□ -0.09
CACNA1C-228ENST00000492150 MFSD5Q6N075 450 aa14.52□□□□□ -0.09
CACNA1C-228ENST00000492150 PSRC1Q6PGN9 363 aaPredicted RBP14.52□□□□□ -0.09
CACNA1C-228ENST00000492150 C16orf59Q7L2K0 433 aa14.52□□□□□ -0.09
CACNA1C-228ENST00000492150 CCDC84Q86UT8 332 aaPredicted RBP14.52□□□□□ -0.09
CACNA1C-228ENST00000492150 CCAR1Q8IX12 1150 aaKnown RBP14.52□□□□□ -0.09
CACNA1C-228ENST00000492150 GJD3Q8N144 294 aa14.52□□□□□ -0.09
CACNA1C-228ENST00000492150 SLC44A5Q8NCS7 719 aa14.52□□□□□ -0.09
CACNA1C-228ENST00000492150 TMEM39AQ9NV64 488 aa14.52□□□□□ -0.09
CACNA1C-228ENST00000492150 PHF24Q9UPV7 400 aa14.52□□□□□ -0.09
CACNA1C-228ENST00000492150 MYH2Q9UKX2 1941 aa14.51□□□□□ -0.09
CACNA1C-228ENST00000492150 SEPT4O43236 478 aa14.51□□□□□ -0.09
CACNA1C-228ENST00000492150 GTPBP6O43824 516 aaPredicted RBP14.51□□□□□ -0.09
CACNA1C-228ENST00000492150 GLRX3O76003 335 aaKnown RBP14.51□□□□□ -0.09
CACNA1C-228ENST00000492150 LRRC41Q15345 812 aa14.51□□□□□ -0.09
CACNA1C-228ENST00000492150 Q3C1V9 767 aa14.51□□□□□ -0.09
CACNA1C-228ENST00000492150 CCDC102BQ68D86 513 aa14.51□□□□□ -0.09
CACNA1C-228ENST00000492150 ANKRD33Q7Z3H0 272 aa14.51□□□□□ -0.09
CACNA1C-228ENST00000492150 ZSCAN29Q8IWY8 852 aaPredicted RBP14.51□□□□□ -0.09
CACNA1C-228ENST00000492150 FAM163AQ96GL9 167 aaPredicted RBP14.51□□□□□ -0.09
CACNA1C-228ENST00000492150 RBPJLQ9UBG7 517 aa14.51□□□□□ -0.09
CACNA1C-228ENST00000492150 PA2G4Q9UQ80 394 aaKnown RBP14.51□□□□□ -0.09
CACNA1C-228ENST00000492150 YBX2Q9Y2T7 364 aaKnown RBP14.51□□□□□ -0.09
CACNA1C-228ENST00000492150 IL15P40933 162 aaPredicted RBP14.5□□□□□ -0.09
CACNA1C-228ENST00000492150 ATP2B2Q01814 1243 aa14.5□□□□□ -0.09
CACNA1C-228ENST00000492150 FAAP100Q0VG06 881 aa14.5□□□□□ -0.09
CACNA1C-228ENST00000492150 ZGPATQ8N5A5 531 aaKnown RBP14.5□□□□□ -0.09
CACNA1C-228ENST00000492150 FERMT2Q96AC1 680 aa14.5□□□□□ -0.09
CACNA1C-228ENST00000492150 OSBPL5Q9H0X9 879 aaPredicted RBP14.5□□□□□ -0.09
CACNA1C-228ENST00000492150 ZNF236Q9UL36 1845 aa14.5□□□□□ -0.09
CACNA1C-228ENST00000492150 DCHS1Q96JQ0 3298 aa14.49□□□□□ -0.09
CACNA1C-228ENST00000492150 SLC15A5A6NIM6 579 aa14.49□□□□□ -0.09
CACNA1C-228ENST00000492150 TBC1D12O60347 775 aa14.49□□□□□ -0.09
CACNA1C-228ENST00000492150 PQBP1O60828 265 aaKnown RBP14.49□□□□□ -0.09
CACNA1C-228ENST00000492150 UBTFL1P0CB47 393 aaPredicted RBP14.49□□□□□ -0.09
CACNA1C-228ENST00000492150 CYP2C19P33261 490 aa14.49□□□□□ -0.09
CACNA1C-228ENST00000492150 BTDP43251 543 aa14.49□□□□□ -0.09
CACNA1C-228ENST00000492150 PICALMQ13492 652 aa14.49□□□□□ -0.09
CACNA1C-228ENST00000492150 RASGRF1Q13972 1273 aa14.49□□□□□ -0.09
CACNA1C-228ENST00000492150 PPP2R2DQ66LE6 453 aa14.49□□□□□ -0.09
CACNA1C-228ENST00000492150 DZIP1Q86YF9 867 aaKnown RBP14.49□□□□□ -0.09
CACNA1C-228ENST00000492150 FAM178BQ8IXR5 827 aa14.49□□□□□ -0.09
CACNA1C-228ENST00000492150 MTIF3Q9H2K0 278 aaKnown RBP14.49□□□□□ -0.09
CACNA1C-228ENST00000492150 ABCF2Q9UG63 623 aa14.49□□□□□ -0.09
CACNA1C-228ENST00000492150 TBX21Q9UL17 535 aa14.49□□□□□ -0.09
CACNA1C-228ENST00000492150 CACNA1GO43497 2377 aa14.48□□□□□ -0.09
CACNA1C-228ENST00000492150 PDS5AQ29RF7 1337 aaKnown RBP14.48□□□□□ -0.09
CACNA1C-228ENST00000492150 E9PSI1 815 aa14.48□□□□□ -0.09
CACNA1C-228ENST00000492150 PEX10O60683 326 aa14.48□□□□□ -0.09
CACNA1C-228ENST00000492150 PTPN5P54829 565 aa14.48□□□□□ -0.09
CACNA1C-228ENST00000492150 RHBDL3P58872 404 aa14.48□□□□□ -0.09
CACNA1C-228ENST00000492150 TIMM10P62072 90 aa14.48□□□□□ -0.09
CACNA1C-228ENST00000492150 ALDH1L2Q3SY69 923 aa14.48□□□□□ -0.09
CACNA1C-228ENST00000492150 SLF2Q8IX21 1173 aa14.48□□□□□ -0.09
CACNA1C-228ENST00000492150 ZNF384Q8TF68 577 aa14.48□□□□□ -0.09
CACNA1C-228ENST00000492150 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.48□□□□□ -0.09
CACNA1C-228ENST00000492150 COPRSQ9NQ92 184 aa14.48□□□□□ -0.09
CACNA1C-228ENST00000492150 MROH7-TTC4A0A0A0MT08 1334 aa14.47□□□□□ -0.09
CACNA1C-228ENST00000492150 GPR75-ASB3A0A0A6YYF3 556 aa14.47□□□□□ -0.09
CACNA1C-228ENST00000492150 POTEB3A0JP26 581 aa14.47□□□□□ -0.09
CACNA1C-228ENST00000492150 FAM196BA6NMK8 535 aa14.47□□□□□ -0.09
CACNA1C-228ENST00000492150 DCXO43602 365 aa14.47□□□□□ -0.09
CACNA1C-228ENST00000492150 GFRA3O60609 400 aa14.47□□□□□ -0.09
CACNA1C-228ENST00000492150 RGS20O76081 388 aa14.47□□□□□ -0.09
CACNA1C-228ENST00000492150 PTPREP23469 700 aa14.47□□□□□ -0.09
CACNA1C-228ENST00000492150 SLFN5Q08AF3 891 aa14.47□□□□□ -0.09
CACNA1C-228ENST00000492150 GRB14Q14449 540 aa14.47□□□□□ -0.09
CACNA1C-228ENST00000492150 OLFML2BQ68BL8 750 aa14.47□□□□□ -0.09
CACNA1C-228ENST00000492150 SPTY2D1Q68D10 685 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms