RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 TMEM179Q6ZVK1 233 aa32.55■■■□□ 2.8
SH3GL3-204ENST00000492099 SLC44A5Q8NCS7 719 aa32.55■■■□□ 2.8
SH3GL3-204ENST00000492099 ACER1Q8TDN7 264 aa32.55■■■□□ 2.8
SH3GL3-204ENST00000492099 GTF3C2Q8WUA4 911 aaPredicted RBP32.55■■■□□ 2.8
SH3GL3-204ENST00000492099 GABRQQ9UN88 632 aa32.55■■■□□ 2.8
SH3GL3-204ENST00000492099 MGAMO43451 1857 aa32.54■■■□□ 2.8
SH3GL3-204ENST00000492099 HERVK_113P62684 666 aa32.54■■■□□ 2.8
SH3GL3-204ENST00000492099 GIMAP6Q6P9H5 292 aa32.54■■■□□ 2.8
SH3GL3-204ENST00000492099 CTR9Q6PD62 1173 aa32.54■■■□□ 2.8
SH3GL3-204ENST00000492099 ARPP21Q9UBL0 812 aaPredicted RBP32.54■■■□□ 2.8
SH3GL3-204ENST00000492099 SALL3Q9BXA9 1300 aa32.53■■■□□ 2.8
SH3GL3-204ENST00000492099 FLT3LGP49771 235 aa32.53■■■□□ 2.8
SH3GL3-204ENST00000492099 SLAIN1Q8ND83 568 aa32.53■■■□□ 2.8
SH3GL3-204ENST00000492099 CCDC17Q96LX7 622 aa32.53■■■□□ 2.8
SH3GL3-204ENST00000492099 CYP2D7A0A087X1C5 515 aa32.52■■■□□ 2.8
SH3GL3-204ENST00000492099 USP17L15C9J2P7 530 aa32.52■■■□□ 2.8
SH3GL3-204ENST00000492099 USP17L13C9JLJ4 530 aa32.52■■■□□ 2.8
SH3GL3-204ENST00000492099 USP17L11C9JVI0 530 aa32.52■■■□□ 2.8
SH3GL3-204ENST00000492099 USP17L18D6R9N7 530 aa32.52■■■□□ 2.8
SH3GL3-204ENST00000492099 USP17L22D6RA61 530 aa32.52■■■□□ 2.8
SH3GL3-204ENST00000492099 USP17L17D6RBQ6 530 aa32.52■■■□□ 2.8
SH3GL3-204ENST00000492099 USP17L19D6RCP7 530 aa32.52■■■□□ 2.8
SH3GL3-204ENST00000492099 USP17L20D6RJB6 530 aa32.52■■■□□ 2.8
SH3GL3-204ENST00000492099 GNAT2P19087 354 aa32.52■■■□□ 2.8
SH3GL3-204ENST00000492099 CDK8P49336 464 aa32.52■■■□□ 2.8
SH3GL3-204ENST00000492099 USP17L24Q0WX57 530 aa32.52■■■□□ 2.8
SH3GL3-204ENST00000492099 IRF5Q13568 498 aa32.52■■■□□ 2.8
SH3GL3-204ENST00000492099 C16orf86Q6ZW13 317 aa32.52■■■□□ 2.8
SH3GL3-204ENST00000492099 RWDD1Q9H446 243 aaPredicted RBP32.52■■■□□ 2.8
SH3GL3-204ENST00000492099 KIAA0100Q14667 2235 aaKnown RBP32.51■■■□□ 2.8
SH3GL3-204ENST00000492099 GPRC5AQ8NFJ5 357 aa32.51■■■□□ 2.79
SH3GL3-204ENST00000492099 FSD1Q9BTV5 496 aa32.51■■■□□ 2.79
SH3GL3-204ENST00000492099 BAZ2AQ9UIF9 1905 aaKnown RBP32.51■■■□□ 2.79
SH3GL3-204ENST00000492099 GSG1L2A8MUP6 293 aa32.5■■■□□ 2.79
SH3GL3-204ENST00000492099 GPAA1O43292 621 aa32.5■■■□□ 2.79
SH3GL3-204ENST00000492099 MYCP01106 439 aaPredicted RBP32.5■■■□□ 2.79
SH3GL3-204ENST00000492099 EN2P19622 333 aaPredicted RBP32.5■■■□□ 2.79
SH3GL3-204ENST00000492099 SBK1Q52WX2 424 aa32.5■■■□□ 2.79
SH3GL3-204ENST00000492099 BIN2Q9UBW5 565 aaPredicted RBP32.5■■■□□ 2.79
SH3GL3-204ENST00000492099 RBBP6Q7Z6E9 1792 aaKnown RBP32.5■■■□□ 2.79
SH3GL3-204ENST00000492099 ADCY3O60266 1144 aa32.49■■■□□ 2.79
SH3GL3-204ENST00000492099 VCAM1P19320 739 aa32.49■■■□□ 2.79
SH3GL3-204ENST00000492099 UBXN2AP68543 259 aa32.49■■■□□ 2.79
SH3GL3-204ENST00000492099 CATSPERGQ6ZRH7 1159 aa32.49■■■□□ 2.79
SH3GL3-204ENST00000492099 PXYLP1Q8TE99 480 aa32.49■■■□□ 2.79
SH3GL3-204ENST00000492099 STAP2Q9UGK3 403 aa32.49■■■□□ 2.79
SH3GL3-204ENST00000492099 AKR1B1P15121 316 aa32.48■■■□□ 2.79
SH3GL3-204ENST00000492099 TXNRD2Q9NNW7 524 aa32.48■■■□□ 2.79
SH3GL3-204ENST00000492099 RBPJLQ9UBG7 517 aa32.48■■■□□ 2.79
SH3GL3-204ENST00000492099 A0A1W2PRG0 241 aa32.47■■■□□ 2.79
SH3GL3-204ENST00000492099 SMIM22K7EJ46 135 aa32.47■■■□□ 2.79
SH3GL3-204ENST00000492099 EXOC6Q8TAG9 804 aa32.47■■■□□ 2.79
SH3GL3-204ENST00000492099 ARHGEF10LQ9HCE6 1279 aa32.47■■■□□ 2.79
SH3GL3-204ENST00000492099 TNRC18O15417 2968 aaPredicted RBP32.46■■■□□ 2.79
SH3GL3-204ENST00000492099 M0R2C6 588 aa32.46■■■□□ 2.79
SH3GL3-204ENST00000492099 PDE1AP54750 535 aa32.46■■■□□ 2.79
SH3GL3-204ENST00000492099 PATL2C9JE40 543 aaKnown RBP32.45■■■□□ 2.79
SH3GL3-204ENST00000492099 ERVK-9P63128 1117 aa32.45■■■□□ 2.79
SH3GL3-204ENST00000492099 ERVK-24P63145 666 aa32.45■■■□□ 2.79
SH3GL3-204ENST00000492099 ICA1Q05084 483 aa32.45■■■□□ 2.79
SH3GL3-204ENST00000492099 MTFR1Q15390 333 aa32.45■■■□□ 2.79
SH3GL3-204ENST00000492099 SMC5Q8IY18 1101 aa32.45■■■□□ 2.79
SH3GL3-204ENST00000492099 RPAP3Q9H6T3 665 aaPredicted RBP32.45■■■□□ 2.79
SH3GL3-204ENST00000492099 SH2D4AQ9H788 454 aa32.45■■■□□ 2.79
SH3GL3-204ENST00000492099 RABGAP1Q9Y3P9 1069 aa32.45■■■□□ 2.79
SH3GL3-204ENST00000492099 APPP05067 770 aa32.44■■■□□ 2.78
SH3GL3-204ENST00000492099 ZMYM1Q5SVZ6 1142 aa32.44■■■□□ 2.78
SH3GL3-204ENST00000492099 EVI5LQ96CN4 794 aa32.44■■■□□ 2.78
SH3GL3-204ENST00000492099 PAGR1Q9BTK6 254 aa32.44■■■□□ 2.78
SH3GL3-204ENST00000492099 SUPT16HQ9Y5B9 1047 aaKnown RBP32.44■■■□□ 2.78
SH3GL3-204ENST00000492099 MINDY4BA8MYZ0 360 aa32.43■■■□□ 2.78
SH3GL3-204ENST00000492099 MAPK4P31152 587 aa32.43■■■□□ 2.78
SH3GL3-204ENST00000492099 TDO2P48775 406 aa32.43■■■□□ 2.78
SH3GL3-204ENST00000492099 CCAR1Q8IX12 1150 aaKnown RBP32.43■■■□□ 2.78
SH3GL3-204ENST00000492099 NACAP1Q9BZK3 213 aa32.43■■■□□ 2.78
SH3GL3-204ENST00000492099 GJD2Q9UKL4 321 aa32.43■■■□□ 2.78
SH3GL3-204ENST00000492099 TMX2Q9Y320 296 aa32.43■■■□□ 2.78
SH3GL3-204ENST00000492099 CCL5P13501 91 aa32.42■■■□□ 2.78
SH3GL3-204ENST00000492099 ELNP15502 786 aa32.42■■■□□ 2.78
SH3GL3-204ENST00000492099 Q3C1V9 767 aa32.42■■■□□ 2.78
SH3GL3-204ENST00000492099 LBX2Q6XYB7 198 aa32.42■■■□□ 2.78
SH3GL3-204ENST00000492099 SIAH1Q8IUQ4 282 aa32.42■■■□□ 2.78
SH3GL3-204ENST00000492099 NKX2-3Q8TAU0 364 aa32.42■■■□□ 2.78
SH3GL3-204ENST00000492099 LPAR1Q92633 364 aa32.42■■■□□ 2.78
SH3GL3-204ENST00000492099 SEC62Q99442 399 aaKnown RBP32.42■■■□□ 2.78
SH3GL3-204ENST00000492099 LNPKQ9C0E8 428 aa32.42■■■□□ 2.78
SH3GL3-204ENST00000492099 KANSL2Q9H9L4 492 aa32.42■■■□□ 2.78
SH3GL3-204ENST00000492099 EPB41L4AQ9HCS5 686 aaPredicted RBP32.42■■■□□ 2.78
SH3GL3-204ENST00000492099 MYH8P13535 1937 aa32.41■■■□□ 2.78
SH3GL3-204ENST00000492099 PEX10O60683 326 aa32.41■■■□□ 2.78
SH3GL3-204ENST00000492099 POTEEQ6S8J3 1075 aa32.41■■■□□ 2.78
SH3GL3-204ENST00000492099 IFNL3Q8IZI9 196 aa32.41■■■□□ 2.78
SH3GL3-204ENST00000492099 RNF208Q9H0X6 261 aa32.41■■■□□ 2.78
SH3GL3-204ENST00000492099 MKNK2Q9HBH9 465 aa32.41■■■□□ 2.78
SH3GL3-204ENST00000492099 CCNA1P78396 465 aa32.4■■■□□ 2.78
SH3GL3-204ENST00000492099 ZNF287Q9HBT7 754 aa32.4■■■□□ 2.78
SH3GL3-204ENST00000492099 HOXC10Q9NYD6 342 aa32.4■■■□□ 2.78
SH3GL3-204ENST00000492099 ROBO3Q96MS0 1386 aa32.4■■■□□ 2.78
SH3GL3-204ENST00000492099 PDE4DIPQ5VU43 2346 aa32.4■■■□□ 2.78
SH3GL3-204ENST00000492099 DOCK3Q8IZD9 2030 aa32.39■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms